SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g143600

Feature Type:gene_model
Chromosome:Gm16
Start:30573331
stop:30575932
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g143600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G50820.1AT OEC33,PSBO-2,PSBO2 JGI N/AIEA
GO:0015979GO-bp photosynthesis JGI N/AIEA
GO:0042549GO-bp photosystem II stabilization JGI N/AIEA
GO:0009523GO-cc photosystem II JGI N/AIEA
GO:0009654GO-cc photosystem II oxygen evolving complex JGI N/AIEA
GO:0019898GO-cc extrinsic component of membrane JGI N/AIEA
GO:0005509GO-mf calcium ion binding JGI N/AIEA
K02716KEGG Photosynthesis proteins JGI N/AIEA
PTHR34058PantherFam OXYGEN-EVOLVING ENHANCER PROTEIN 1-2, CHLOROPLASTIC JGI N/AIEA
PF01716Pfam Manganese-stabilising protein / photosystem II polypeptide JGI N/AIEA

Gene model name correspondences to Glyma.16g143600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g25860 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g143600
>Glyma.16g143600.1 sequence-type=CDS polypeptide=Glyma.16g143600.1.p locus=Glyma.16g143600 id=Glyma.16g143600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCGTCACTACAAGCAGCAGCTACTTTCATGCAACCCACCAAGTTGAGCAGGAGCAACACTTTGCAGCAAAAGTCTACTCAGTCCATTTCCAAGGCTTTTGGTTTGGAACCTGTTGGAGCTAAAAAGGTCACATGCTCCCTTCAGGCTGATCTTAAGGACTTGGCTCACAAGTGTGTTGATGCTACCAAAATTGCAGGATTCGCCCTTGCCACCTCTGCCCTCGTTGTCTCTGGGGCAAGTGCTGAAGGTGTTCCAAAGAGGCTAACCTTCGACGAAATCCAGAGCAAGACCTACTTGGAAGTGAAGGGGACAGGAACAGCAAACCAGTGCCCAACAATTGATGGTGGATTGGACTCATTTGCCTTCAAGCCGGGGAAATACAATGCCAAGAAGTTGTGCCTTGAGCCAACTTCATTCACAGTGAAGGCCGAGGGTGTGGCCAAGAATGCTCCCCTTGAGTTCCAAAACACAAAGCTCATGACACGTTTGACCTACACTCTGGATGAGATTGAGGGACCCTTTGAGGTGTCTTCTGATGGCACTGTCAAGTTTGAGGAGAAGGATGGCATTGACTACGCCGCCGTGACAGTTCAGCTACCGGGAGGCGAACGTGTGCCCTTTCTCTTCACCATCAAGCAGTTGGTGGCATCAGGGAAGCCAGATAGCTTTAGTGGGGAGTTTCTAGTCCCATCCTACCGTGGAAGCTCTTTCTTGGACCCCAAGGGAAGAGGTGCTTCCACAGGTTATGACAATGCAGTTGCTTTGCCTGCTGGTGGAAGAGGAGATGAGGAAGAACTTGCCAAGGAAAACAATAAAAGTGCCTCATCATCCAAGGGCAAAATCACCTTGAGTGTCACCAAGACCAAGCCTGAGACGGGTGAGGTTATCGGTGTGTTCGAGAGTGTTCAACCATCTGACACTGATTTGGGAGCAAAGGCTCCAAAGGATGTCAAGATCCAGGGCATCTGGTATGCTCAGCTTGAGTCATAG
Predicted protein sequences of Glyma.16g143600
>Glyma.16g143600.1.p sequence-type=predicted peptide transcript=Glyma.16g143600.1 locus=Glyma.16g143600 id=Glyma.16g143600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAASLQAAATFMQPTKLSRSNTLQQKSTQSISKAFGLEPVGAKKVTCSLQADLKDLAHKCVDATKIAGFALATSALVVSGASAEGVPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGLDSFAFKPGKYNAKKLCLEPTSFTVKAEGVAKNAPLEFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELAKENNKSASSSKGKITLSVTKTKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGIWYAQLES*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo