SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g116300

Feature Type:gene_model
Chromosome:Gm16
Start:26105840
stop:26108119
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g116300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20693.2AT HMG BETA 1,HMGB2,NFD02,NFD2 JGI N/AIEA
KOG0381 KOG HMG box-containing protein JGI N/AIEA
PF00505Pfam HMG (high mobility group) box JGI N/AIEA

Gene model name correspondences to Glyma.16g116300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g22060 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g116300
>Glyma.16g116300.1 sequence-type=CDS polypeptide=Glyma.16g116300.1.p locus=Glyma.16g116300 id=Glyma.16g116300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGAAAGCTAAATCCGACGCCAAAGCCGCCGATAGCAGGTTGAAGCGGAAGGGCGCTGGTGCTGGGAGGAAGCAATCGAGGAAAGCTGCTAAGGACCCTAACAAGCCGAAGAGACCTCCAAGCGCTTTCTTCGTTTTCATGTCCGAGTTCAGAGAGCAGTTCAAGAAGGAGCATCCTAACAACAAATCCGTCGCTGTTGTCGGCAAAGCTGGTGGTGAAAAATGGAAATCGCTATCTGATGCTGAAAAGGCCCCTTTCGTTGCTACTGCTGAGAAGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTGGAGGGAAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTCAATGATGACGAGGAAGATGAGGAGGAGGATGATGATGAGTAA

>Glyma.16g116300.3 sequence-type=CDS polypeptide=Glyma.16g116300.3.p locus=Glyma.16g116300 id=Glyma.16g116300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGAAAGCTAAATCCGACGCCAAAGCCGCCGATAGCAGGTTGAAGCGGAAGGGCGCTGGTGCTGGGAGGAAGCAATCGAGGAAAGCTGCTAAGGACCCTAACAAGCCGAAGAGACCTCCAAGCGCTTTCTTCGTTTTCATGTCCGAGTTCAGAGAGCAGTTCAAGAAGGAGCATCCTAACAACAAATCCGTCGCTGTTGTCGGCAAAGCTGGTGGTGAAAAATGGAAATCGCTATCTGATGCTGAAAAGGCCCCTTTCGTTGCTACTGCTGAGAAGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTGGAGGGAAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTCAATGATGACGAGGAAGATGAGGTAGATTGA
Predicted protein sequences of Glyma.16g116300
>Glyma.16g116300.1.p sequence-type=predicted peptide transcript=Glyma.16g116300.1 locus=Glyma.16g116300 id=Glyma.16g116300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPKAKSDAKAADSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQLEGKNSEEDESDKSKSEVNDDEEDEEEDDDE*

>Glyma.16g116300.3.p sequence-type=predicted peptide transcript=Glyma.16g116300.3 locus=Glyma.16g116300 id=Glyma.16g116300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPKAKSDAKAADSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQLEGKNSEEDESDKSKSEVNDDEEDEVD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo