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Report for Sequence Feature Glyma.16g103300

Feature Type:gene_model
Chromosome:Gm16
Start:20910120
stop:20911228
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.16g103300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G64230.4AT ubiquitin-conjugating enzyme 28 JGI N/AIEA
GO:0016881GO-mf acid-amino acid ligase activity JGI N/AIEA
KOG0417 KOG Ubiquitin-protein ligase JGI N/AIEA
PTHR24068Panther FAMILY NOT NAMED JGI N/AIEA
PF00179PFAM Ubiquitin-conjugating enzyme JGI N/AIEA

Expression Patterns of Glyma.16g103300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16g103300 not represented in the dataset
Glyma.16g103300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.16g103300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g17730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g103300
>Glyma.16g103300.1 sequence-type=CDS polypeptide=Glyma.16g103300.1.p locus=Glyma.16g103300 ID=Glyma.16g103300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACATGTTCCATTACAATTATAGGCCCTACAGATAACCCATTTGCTGGACATGTGTTTCTTGTGTCAATTCACTTCCCTCCTGATTATCCTTTCAAACCACCCAAGGTTTCATTCCGCACAAAGGTTTTCCACCCTAACATCAACAGTAATGGAAGTATCTACCTTGACATCCTCAAAGAGCAATGGAGTGTTACTCTTACAATATCCAAGATTGCTCACATGTACAAGATTAAGAGAGCCAAGTATGAGGCCACTGCTCGGTCATGGACAGAAAAATATGTCGTGGGCTAA
Predicted protein sequences of Glyma.16g103300
>Glyma.16g103300.1.p sequence-type=predicted peptide transcript=Glyma.16g103300.1 locus=Glyma.16g103300 ID=Glyma.16g103300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTCSITIIGPTDNPFAGHVFLVSIHFPPDYPFKPPKVSFRTKVFHPNINSNGSIYLDILKEQWSVTLTISKIAHMYKIKRAKYEATARSWTEKYVVG*






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