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Report for Sequence Feature Glyma.16g079900

Feature Type:gene_model
Chromosome:Gm16
Start:8451510
stop:8460102
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g079900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G17690.1AT LHP1,TFL2 JGI N/AIEA
PTHR22812PantherFam CHROMOBOX PROTEIN JGI N/AIEA
PF00385Pfam Chromo (CHRromatin Organisation MOdifier) domain JGI N/AIEA

Proteins Associated with Glyma.16g079900
LocusGene SymbolProtein Name
LHP1-1 chromo domain-containing protein LHP1-1
LHP1 non-histone chromosomal protein

Gene model name correspondences to Glyma.16g079900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g08860 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g079900
>Glyma.16g079900.1 sequence-type=CDS polypeptide=Glyma.16g079900.1.p locus=Glyma.16g079900 id=Glyma.16g079900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGGGTGGTGGTGGGAAGAGAAAGGCTTCTACCTCGGAGGCTCCGAACGATGTTGTTGTTGTTGTTGCTGCTGCTTCTGCTCCTTCTGATGATGCTGATTTGGGTGTTGGAGATGTCGGGGGTGTGAAAGTTCAAAACTTTGAGGGAAACGAGGGTACCCAGTTGCGGAATACTGAAGAACAGGAAGAAGAACCCCACCACGTGGAGGGTGATGAAGGAGGAGAAGACGAAGAAGATTATGCCGAGGGAGAGGAAGAATATGAAGAAGAAAATGGTGGTGCTGTTGCTGGGGGACAACAAGGTTTTCCTGCTCTTGGTGAAAATTTCTTTGAAGTTGAAGCCATACGTCGTAAGAGGTTGCGCAAGGGTGAGGTGCAATACTTAATCAAATGGAATGGGTGGCCCGAGACAGCCAACACTTGGGAGCCTCTGGAAAATCTAGAGTCTGTTCCTGATGTTGTTGAAGCTTTTGAGGAGAGCTTGAAGTCCGGAAAACATCGTAAGCGCAAACGCAAGCATGTAGTGCATCATACTCAACCCAAGAAGCGGCTGGAGCGTTCGACAACTCCTTACAGCCTTCGGCGTTTTTCAACTAGTACAGCTGAGAACCATACACAGTCTGCTCCTCCTCTTAATGATCCTAGCCTTCCAGATATTCCCGCCTTCCCTCACACTGTGCTGTTTTCTGATGATGTGGGAAATGGTGCTGAAGGCAGCAGTCTTAGAAAAGCCACACCCAGTAATGCTAACAGGTCTGCAAATGGTTCAGAACAAAATATTAAAAGGAATGAGGAAAATGATTATGATCCTGTGCTTAGTGAGCTTAAAGCTATGACTTCTAATGGGAATGATGCAGACAGGCTTGCAATACGGATTCCAGAAGCTAAGGGTTCTGGGCCTTCTGGCAGTAATGGTCAAATGGATGCTAAATCAAAGGGGGCTTGCATGGAAACAAGTGAAAGTGACCGCTGCCGGGGATCCAAAAGGAGAAAATGTGGTTCCGTAAAGAGGTTCAAGAAAGAACTATATGCTAATGAGCCTGCTAATGCGGAAAATCCAGTTAGCATGCCTGTTGGTACAGCTGAGCCAGAACGAACAAGAGATGCTGGTAGTGGTGGCAATACTAATCATGCCAGACCTGCTAGCAATATTGTAAACATTGTAAAGCCAGTAGGCTATTCAGCTTCAGTAGCCAGTGGAATGCAGGATGTTTTAGTAACCTTTGTGGCTTCAAAGTCTGATGGAACAGAAGTGATGGTTGACAACAAGTATCTAAAAGCATTTAATCCACTTCTTCTGATCAATTTCTATGAGCAGCATCTTCGCTACAGCCCTACATTGTGA

>Glyma.16g079900.2 sequence-type=CDS polypeptide=Glyma.16g079900.2.p locus=Glyma.16g079900 id=Glyma.16g079900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGGGTGGTGGTGGGAAGAGAAAGGCTTCTACCTCGGAGGCTCCGAACGATGTTGTTGTTGTTGTTGCTGCTGCTTCTGCTCCTTCTGATGATGCTGATTTGGGTGTTGGAGATGTCGGGGGTGTGAAAGTTCAAAACTTTGAGGGAAACGAGGGTACCCAGTTGCGGAATACTGAAGAACAGGAAGAAGAACCCCACCACGTGGAGGGTGATGAAGGAGGAGAAGACGAAGAAGATTATGCCGAGGGAGAGGAAGAATATGAAGAAGAAAATGGTGGTGCTGTTGCTGGGGGACAACAAGGTTTTCCTGCTCTTGGTGAAAATTTCTTTGAAGTTGAAGCCATACGTCGTAAGAGGTTGCGCAAGGGTGAGGTGCAATACTTAATCAAATGGAATGGGTGGCCCGAGACAGCCAACACTTGGGAGCCTCTGGAAAATCTAGAGTCTGTTCCTGATGTTGTTGAAGCTTTTGAGGAGAGCTTGAAGTCCGGAAAACATCGTAAGCGCAAACGCAAGCATGTAGTGCATCATACTCAACCCAAGAAGCGGCTGGAGCGTTCGACAACTCCTTACAGCCTTCGGCGTTTTTCAACTAGTACAGCTGAGAACCATACACAGTCTGCTCCTCCTCTTAATGATCCTAGCCTTCCAGATATTCCCGCCTTCCCTCACACTGTGCTGTTTTCTGATGATGTGGGAAATGGTGCTGAAGGCAGCAGTCTTAGAAAAGCCACACCCAGTAATGCTAACAGGTCTGCAAATGGTTCAGAACAAAATATTAAAAGGAATGAGGAAAATGATTATGATCCTGTGCTTAGTGAGCTTAAAGCTATGACTTCTAATGGGAATGATGCAGACAGGCTTGCAATACGGATTCCAGAAGCTAAGGGTTCTGGGCCTTCTGGCAGTAATGGTCAAATGGATGCTAAATCAAAGGGGGCTTGCATGGAAACAAGTGAAAGTGACCGCTGCCGGGGATCCAAAAGGAGAAAATGTGGTTCCGTAAAGAGGTTCAAGAAAGAACTATATGCTAATGAGCCTGCTAATGCGGAAAATCCAGTTAGCATGCCTGTTGGTACAGCTGAGCCAGAACGAACAAGAGATGCTGGTAGTGGTGGCAATACTAATCATGCCAGACCTGCTAGCAATATTGTAAACATTGTAAAGCCAGTAGGCTATTCAGCTTCAGTAGCCAGTGGAATGCAGGATGTTTTAGTAACCTTTGTGGCTTCAAAGTCTGATGGAACAGAAGTGATGGTTGACAACAAGTATCTAAAAGCATTTAATCCACTTCTTGTAGTACCCTATACCTTCACATTATTACATTTAATTATTGGGTGTATTATCTTTTTGGTCCCTCATCTTTTGAGGATTTCTGTTTTTAGTCCTTAA
Predicted protein sequences of Glyma.16g079900
>Glyma.16g079900.1.p sequence-type=predicted peptide transcript=Glyma.16g079900.1 locus=Glyma.16g079900 id=Glyma.16g079900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKGGGGKRKASTSEAPNDVVVVVAAASAPSDDADLGVGDVGGVKVQNFEGNEGTQLRNTEEQEEEPHHVEGDEGGEDEEDYAEGEEEYEEENGGAVAGGQQGFPALGENFFEVEAIRRKRLRKGEVQYLIKWNGWPETANTWEPLENLESVPDVVEAFEESLKSGKHRKRKRKHVVHHTQPKKRLERSTTPYSLRRFSTSTAENHTQSAPPLNDPSLPDIPAFPHTVLFSDDVGNGAEGSSLRKATPSNANRSANGSEQNIKRNEENDYDPVLSELKAMTSNGNDADRLAIRIPEAKGSGPSGSNGQMDAKSKGACMETSESDRCRGSKRRKCGSVKRFKKELYANEPANAENPVSMPVGTAEPERTRDAGSGGNTNHARPASNIVNIVKPVGYSASVASGMQDVLVTFVASKSDGTEVMVDNKYLKAFNPLLLINFYEQHLRYSPTL*

>Glyma.16g079900.2.p sequence-type=predicted peptide transcript=Glyma.16g079900.2 locus=Glyma.16g079900 id=Glyma.16g079900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKGGGGKRKASTSEAPNDVVVVVAAASAPSDDADLGVGDVGGVKVQNFEGNEGTQLRNTEEQEEEPHHVEGDEGGEDEEDYAEGEEEYEEENGGAVAGGQQGFPALGENFFEVEAIRRKRLRKGEVQYLIKWNGWPETANTWEPLENLESVPDVVEAFEESLKSGKHRKRKRKHVVHHTQPKKRLERSTTPYSLRRFSTSTAENHTQSAPPLNDPSLPDIPAFPHTVLFSDDVGNGAEGSSLRKATPSNANRSANGSEQNIKRNEENDYDPVLSELKAMTSNGNDADRLAIRIPEAKGSGPSGSNGQMDAKSKGACMETSESDRCRGSKRRKCGSVKRFKKELYANEPANAENPVSMPVGTAEPERTRDAGSGGNTNHARPASNIVNIVKPVGYSASVASGMQDVLVTFVASKSDGTEVMVDNKYLKAFNPLLVVPYTFTLLHLIIGCIIFLVPHLLRISVFSP*






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