SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g056900

Feature Type:gene_model
Chromosome:Gm16
Start:5553657
stop:5559268
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g056900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G27110.2AT JGI N/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0004222GO-mf metalloendopeptidase activity JGI N/AIEA
PTHR10120PantherFam CAAX PRENYL PROTEASE 1 JGI N/AIEA
PF01435Pfam Peptidase family M48 JGI N/AIEA

Gene model name correspondences to Glyma.16g056900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g06130 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g056900
>Glyma.16g056900.1 sequence-type=CDS polypeptide=Glyma.16g056900.1.p locus=Glyma.16g056900 id=Glyma.16g056900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCCACGCCCTTCTCCACTTTCTGCCACTTCCACAAACCCACCCTCCTTTTCTTAGCTTCCGACGGGTTCAGGCTCGGTGGCGCTCCGGCGATCGCCTTCGGAAAGGTTCGGAAGAACCGCAAAATGGGAATATTCCCCGTTTGCAGAGCTGGTTCTGCCGTCGTCTTCCGCGACCTCGACGCCGACGACTTTCGCCACCCTCTTGATCAACAGAATACGCTGCTACTGAGAGCAATTCCGGGATTGAACGAACTGGGAAAAGCTCTTCTAGGAACTGTATCTGAGCAGGTTATGCTCCTTGAAAACATTGGGACATCCGTCCTTGTTTCTAAAAATCAGCTTCCTGATCTTTACCACCTAATGGTCGAAGCTGCCGAAATATTAAATGTAGATGCCCCTGATCTATATGTTCGTCAAAGTCCTGTGCCAAATGCATATACATTAGCTATAAGTGGTAAACGACCTTTCGTTGTCATTCATACTAGCCTTGTGGAGCTCCTGACAAAAGCAGAGTTGCAGGCTGTTTTGGCTCATGAGCTGGGTCACCTAAAATGTGATCATGGTGTGTGGCTTACATATGCAAATATTCTAACCCTTGGAGCCTATTCTGTACCTGGTATTGGCGGTATGATAGCTCAGACTTTGGAAGAGCAGCTGTTCCGCTGGCTTCGAGCAGCTGAGTTGACTTGTGATCGTGCAGCTCTTCTTGTTGCTCAAGACCCTAAGGTTGTCATCTCTGTCCTCATGAAATTAGCTGGGGGATGTCCATCTATGGCTGATCAACTAAATGTGGATGCATTCCTGGAGCAAGCTCGCTCTTATGAAAAAGCTGCTTCCAGCCCAATTGGGTGGTATATAAGGAATGCACAAACAAGGCAACTGTCACATCCTCTGCCTGTTCTACGTGCTAGCGAAATTGATGAATGGTCAAGAACTCCAGCTTATAAATCTCTTTTGAAACGAGGAATTCAGATCAAATCTTAG
Predicted protein sequences of Glyma.16g056900
>Glyma.16g056900.1.p sequence-type=predicted peptide transcript=Glyma.16g056900.1 locus=Glyma.16g056900 id=Glyma.16g056900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASTPFSTFCHFHKPTLLFLASDGFRLGGAPAIAFGKVRKNRKMGIFPVCRAGSAVVFRDLDADDFRHPLDQQNTLLLRAIPGLNELGKALLGTVSEQVMLLENIGTSVLVSKNQLPDLYHLMVEAAEILNVDAPDLYVRQSPVPNAYTLAISGKRPFVVIHTSLVELLTKAELQAVLAHELGHLKCDHGVWLTYANILTLGAYSVPGIGGMIAQTLEEQLFRWLRAAELTCDRAALLVAQDPKVVISVLMKLAGGCPSMADQLNVDAFLEQARSYEKAASSPIGWYIRNAQTRQLSHPLPVLRASEIDEWSRTPAYKSLLKRGIQIKS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo