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Report for Sequence Feature Glyma.16g053900

Feature Type:gene_model
Chromosome:Gm16
Start:5242121
stop:5243461
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g053900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G27010.1AT AT-TCP20,ATTCP20,PCF1,TCP20 JGI N/AIEA
PTHR31072PantherFam TRANSCRIPTION FACTOR TCP4-RELATED JGI N/AIEA
PTHR31072:SF4PantherFam TRANSCRIPTION FACTOR TCP16-RELATED JGI N/AIEA
PF03634Pfam TCP family transcription factor JGI N/AIEA

Proteins Associated with Glyma.16g053900
LocusGene SymbolProtein Name
TCP20 Teosinte branched1 and cycloidea and proliferating cell factor family proteingene 20

Gene model name correspondences to Glyma.16g053900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g05840 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g053900
>Glyma.16g053900.1 sequence-type=CDS polypeptide=Glyma.16g053900.1.p locus=Glyma.16g053900 id=Glyma.16g053900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCCAAGGGCTCAAAGCAGCAGCCACAGCAATCACAGGAGGTGGTACCAAACTTCCTCAGCCTCCCCCAACAGCAACAAGGGAATACCAACAACAACAACATGGGAGAGAACAAACCTGCAGAGGTGAAGGATTTCCAGATAGTGGTAGCTGAGAACAAGGAAGAGAGCAAGAAACAGCAGCAACAGTTGGCACCAAAGAGGAGTTCCAACAAGGACAGGCACACCAAGGTTGAAGGCAGGGGAAGGAGGATAAGGATGCCTGCTCTCTGCGCAGCCAGAATCTTCCAGTTGACCAGGGAATTGGGTCACAAATCTGATGGGGAAACCATCCAGTGGCTCCTCCAGCAGGCTGAGCCATCCATCATAGCTGCCACTGGGACTGGCACAATACCAGCATCTGCTCTTGCTGCTGCTGGAAACTCACTCTCACCACAAGCTGCTTCTCTTTCATCATCCTTGCACCAACATCAACAAAAGATTGATGAATTGGGTGGGTCAGGGGGGAGTAGTAGTAGGGCCAGCTGGCAAATGGTTGGGGGGAATTTGGGGAGACCCCATTTGGGTGTGGGTGTGGCCACAGCAGCAGGCCTATGGCCCCCTCATGTCAGTGGATTTGGATTTCAAACACCACCAACAACAACAACACCAACAACAACAACATCATCATCTGGTCCATCTAATGCCACCTTAGCCACTGAGAGCTCCAATTACCTTCAGAAAATTGCATTCCCTGGCTTTGACTTGCCTACTTCTGCCACTAACATGATGGGTCACATGAGTTTCACCTCAATTTTGGGTGGAGGTGGGGGTGGTGGGGCCCAGCATATGCCTGGCTTGGAGCTTGGTCTTTCCCAGGATGGCCATATTGGGGTGTTGAATCAACAGGCCTTGAACCAGATTTATCAGCAGATGAATCAGGCTGGTAGAGTGCATCATCATCAGCATCAGCATCATCATCAGCATCATCAGCAGCAACAACACCATCAGCAAACTCCTGCTAAGGATGATTCTCAAGGCTCAGGAGGACAGTAG
Predicted protein sequences of Glyma.16g053900
>Glyma.16g053900.1.p sequence-type=predicted peptide transcript=Glyma.16g053900.1 locus=Glyma.16g053900 id=Glyma.16g053900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPKGSKQQPQQSQEVVPNFLSLPQQQQGNTNNNNMGENKPAEVKDFQIVVAENKEESKKQQQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSLSPQAASLSSSLHQHQQKIDELGGSGGSSSRASWQMVGGNLGRPHLGVGVATAAGLWPPHVSGFGFQTPPTTTTPTTTTSSSGPSNATLATESSNYLQKIAFPGFDLPTSATNMMGHMSFTSILGGGGGGGAQHMPGLELGLSQDGHIGVLNQQALNQIYQQMNQAGRVHHHQHQHHHQHHQQQQHHQQTPAKDDSQGSGGQ*






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