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Report for Sequence Feature Glyma.16g050500

Feature Type:gene_model
Chromosome:Gm16
Start:4839060
stop:4842751
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g050500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12820.1AT AFB3 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG1947 KOG Leucine rich repeat proteins, some proteins contain F-box JGI N/AIEA
PTHR24006PantherFam UBIQUITIN CARBOXYL-TERMINAL HYDROLASE JGI N/AIEA
PF12937Pfam F-box-like JGI N/AIEA
PF13516Pfam Leucine Rich repeat JGI N/AIEA

Proteins Associated with Glyma.16g050500
LocusGene SymbolProtein Name
AFB3B auxin signaling F-box 3 protein

Gene model name correspondences to Glyma.16g050500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g05500 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g050500
>Glyma.16g050500.1 sequence-type=CDS polypeptide=Glyma.16g050500.1.p locus=Glyma.16g050500 id=Glyma.16g050500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAATTATTTCCCGGACGAGGTAATAGAGCACATATTTGACTATGTGGTGTCACACAGTGACCGAAATGCTTTGTCTTTGGTGTGTAAAAGTTGGTACAGGATAGAGAGGTGTACGAGGCAAAGGGTGTTCATAGGGAACTGTTACTCCATCACTCCGGAGAGGTTGATCCAGAGGTTTCCTGGTCTAAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTGCCTTATGATTGGGGTGGCTTTGTGCATCCATGGATTGAGGCACTGGCCAAGAACAAGGTTGGCTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTCTCTCGGTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCCACTGATGGCCTTGCTGCTTTAGCTGCAAATTGCAGGTTTCTTAGGGAGCTGGATCTGCAAGAAAATGAGGTTGAAGATCACAAAGGCCAGTGGCTAAGTTGCTTTCCTGACAACTGCACATCACTTGTTTCACTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCACTAGAGAGACTTGTGGCCAGATCTCCTTACCTGAAGAGTTTAAAGCTGAATCGTTCAGTGCCCTTTGATGCACTGCAAAGGATAATGATGCGAGCACCTCAATTATCGGATTTGGGTATTGGATCATTTGTCCATGATCCAGAATCAGAGGCCTACATAAAGCTTAAGAATACCATTCTCAAGCGCAAGTCCATAACCAGTTTGTCAGGATTTTTGGAAGTTGCTCCTCATTGTCTTGCAGCAATATATCCTATTTGCCCGAACTTAACATCCTTGAACTTGAGCTATGCAGCAGGCATTCAGGGTAGTGATCTGATAAAACTGATTCGTCACTGTGTGAAACTTCAGCGCTTATTGATAATGGATTGCATTGGAGACAAAGGACTTGATGTTGTAGCTACTTCATGTAAAGACTTGCAAGAATTGAGGGTGTTTCCATCTGTTCCCTTTGGAAATCCAGCAGCCGTCACAGAAAAAGGGCTGGTTGCAATATCAATGGGTTGCCCTAAGCTTCACTCATTGCTCTATTTCTGCCACCAGATGACAAATGCTGCACTCATAACGGTGGCTAAGAACTGCCCAAATTTTATCCGATTCAGGCTGTGTATCCTTGATGCAACAAAACCCGACCCTGATACAATGCAGCCACTGGACGAAGGTTTTGGCGCAATTGTTCAGTCTTGCAGGCGACTCAGGCGCCTATCCCTCTCGGGGCAATTGACCGACCAGGTTTTCCTTTACATAGGAATGTACGCTGAGAAGCTTGAAATGCTGTCCATTGCATTTGCTGGGGAGAGCGACAAGGGAATGCTCTATGTGTTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATTAGAGACTGCCCTTTTGGCAATGTGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACCGTCGGAGCCTGCAAGTTGCTAGCAAAGAAGATGCCGAGGTTGAATGTGGAGATCTTCAATGAAAACGAGCAAGAAGATTGTAGTCTGGAAGATGGGCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCTGAATATGTATGGACTCTATAG
Predicted protein sequences of Glyma.16g050500
>Glyma.16g050500.1.p sequence-type=predicted peptide transcript=Glyma.16g050500.1 locus=Glyma.16g050500 id=Glyma.16g050500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMNYFPDEVIEHIFDYVVSHSDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYDWGGFVHPWIEALAKNKVGLEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAALAANCRFLRELDLQENEVEDHKGQWLSCFPDNCTSLVSLNFACLKGEVSLGALERLVARSPYLKSLKLNRSVPFDALQRIMMRAPQLSDLGIGSFVHDPESEAYIKLKNTILKRKSITSLSGFLEVAPHCLAAIYPICPNLTSLNLSYAAGIQGSDLIKLIRHCVKLQRLLIMDCIGDKGLDVVATSCKDLQELRVFPSVPFGNPAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGQLTDQVFLYIGMYAEKLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNVALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQKVEKMYLYRTLAGKRKDAPEYVWTL*






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