SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g047600

Feature Type:gene_model
Chromosome:Gm16
Start:4505305
stop:4510798
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g047600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G61890.1AT JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
PTHR31190PantherFam DNA-BINDING DOMAIN JGI N/AIEA
PF00847Pfam AP2 domain JGI N/AIEA

Proteins Associated with Glyma.16g047600
LocusGene SymbolProtein Name
ERF127 Ethylene-responsive factor gene 127

Gene model name correspondences to Glyma.16g047600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g05190 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g047600
>Glyma.16g047600.2 sequence-type=CDS polypeptide=Glyma.16g047600.2.p locus=Glyma.16g047600 id=Glyma.16g047600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATCCAATCAATACTGGTGATGATAGCACCCTTTCTTCACCAATTCCACAATATGGGCAAATAAGCAATTCTTGCTTGATTGAGACTCAGGACCCATCCCTACAGCCTTTAAATCAAGGAGGAAATGGGAGAAAAAGACATTATAGAGGAGTTAGGCAGAGACCGTGGGGCAAATGGGCTGCCGAAATCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGCTGCTGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTCAAAGGCTCCAAAGCCAAGCTCAATTTCCCTGAACATGTTCTTCTTCCTCCTCCTCCAATATCATCATCATCACCACCTTGCAATAATAATAATAATCATCATAGTTATTATTATGGTTCTTCAGCTCTTGCACCTCTTGCACCACCACCACAACATGTTTATGATCAAACACCACCACCACAACAACAACCCTTGCTATCATCATCAGCACAAGAAGAAGGGTTTCCAAATCTAATGCAGTACGCGCAGCTTCTTTGGAGTAGGGATGATGATGATCTACAGCGTATTGCTTCAGGCCTTCATCAACATCATCATCACAATGAGGCTTTTTATGATTCAAGTTCTTCAACTTTGTTCTCATCAACTTCCACTACTTATTCTATGACTGTGTCTGATCAACAGCAGAATATTGGAGATGACACGAGTACTCCCAAGGGGGCAGAATATAATTATGGTGGCTGCTTTTTTAGAGGGAGTGATTTTCATGACAAGAATTGA

>Glyma.16g047600.3 sequence-type=CDS polypeptide=Glyma.16g047600.3.p locus=Glyma.16g047600 id=Glyma.16g047600.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATCCAATCAATACTGGTGATGATAGCACCCTTTCTTCACCAATTCCACAATATGGGCAAATAAGCAATTCTTGCTTGATTGAGACTCAGGACCCATCCCTACAGCCTTTAAATCAAGGAGGAAATGGGAGAAAAAGACATTATAGAGGAGTTAGGCAGAGACCGTGGGGCAAATGGGCTGCCGAAATCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGCTGCTGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTCAAAGGCTCCAAAGCCAAGCTCAATTTCCCTGAACATGTTCTTCTTCCTCCTCCTCCAATATCATCATCATCACCACCTTGCAATAATAATAATAATCATCATAGTTATTATTATGGTTCTTCAGCTCTTGCACCTCTTGCACCACCACCACAACATGTTTATGATCAAACACCACCACCACAACAACAACCCTTGCTATCATCATCAGCACAAGAAGAAGGGTTTCCAAATCTAATGCAGTACGCGCAGCTTCTTTGGAGTAGGGATGATGATGATCTACAGCGTATTGCTTCAGGCCTTCATCAACATCATCATCACAATGAGGCTTTTTATGATTCAAGTTCTTCAACTTTGTTCTCATCAACTTCCACTACTTATTCTATGACTGTGTCTGATCAACAGCAGAATATTGGAGATGACACGAGTACTCCCAAGGGGGCAGAATATAATTATGGTGGCTGCTTTTTTAGAGGGAGTGATTTTCATGACAAGAATTGA
Predicted protein sequences of Glyma.16g047600
>Glyma.16g047600.2.p sequence-type=predicted peptide transcript=Glyma.16g047600.2 locus=Glyma.16g047600 id=Glyma.16g047600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHPINTGDDSTLSSPIPQYGQISNSCLIETQDPSLQPLNQGGNGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAAAYDAAALKFKGSKAKLNFPEHVLLPPPPISSSSPPCNNNNNHHSYYYGSSALAPLAPPPQHVYDQTPPPQQQPLLSSSAQEEGFPNLMQYAQLLWSRDDDDLQRIASGLHQHHHHNEAFYDSSSSTLFSSTSTTYSMTVSDQQQNIGDDTSTPKGAEYNYGGCFFRGSDFHDKN*

>Glyma.16g047600.3.p sequence-type=predicted peptide transcript=Glyma.16g047600.3 locus=Glyma.16g047600 id=Glyma.16g047600.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHPINTGDDSTLSSPIPQYGQISNSCLIETQDPSLQPLNQGGNGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAAAYDAAALKFKGSKAKLNFPEHVLLPPPPISSSSPPCNNNNNHHSYYYGSSALAPLAPPPQHVYDQTPPPQQQPLLSSSAQEEGFPNLMQYAQLLWSRDDDDLQRIASGLHQHHHHNEAFYDSSSSTLFSSTSTTYSMTVSDQQQNIGDDTSTPKGAEYNYGGCFFRGSDFHDKN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo