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Report for Sequence Feature Glyma.16g043300

Feature Type:gene_model
Chromosome:Gm16
Start:4059536
stop:4066000
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.16g043300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G18280.2AT apyrase 2 JGI N/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
KOG1385 KOG Nucleoside phosphatase JGI N/AIEA
PTHR11782Panther ADENOSINE/GUANOSINE DIPHOSPHATASE JGI N/AIEA
PTHR11782:SF8Panther JGI N/AIEA
PF01150PFAM GDA1/CD39 (nucleoside phosphatase) family JGI N/AIEA
PWY-5687SoyCyc9 pyrimidine ribonucleotides interconversion Plant Metabolic Network ISS
PWY-7177SoyCyc9 UTP and CTP dephosphorylation II Plant Metabolic Network ISS
PWY-7185SoyCyc9 UTP and CTP dephosphorylation I Plant Metabolic Network ISS
GN7V-43746SoyCyc9-rxn apyrase Plant Metabolic Network ISS

Proteins Associated with Glyma.16g043300
LocusGene SymbolProtein Name
GS52 ecto-apyrase GS52

Expression Patterns of Glyma.16g043300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16g043300 not represented in the dataset
Glyma.16g043300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.16g043300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g04750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g043300
>Glyma.16g043300.1 sequence-type=CDS polypeptide=Glyma.16g043300.1.p locus=Glyma.16g043300 ID=Glyma.16g043300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTACTTGTGCTATGGTCAAGAGGGACTAAGAACATGGACTTCCTAACCCTCTTCACTCTTCTACTCTTGTTATTCATTCATACAGCACTCTCTTCTACCCAATATCATGATGGGAACATCTTACTCACTCATCGTAAGATCTTCCCCAAACAGGAAGCTATCACCTCGTACGCTGTCATCTTTGATGCTGGTAGCACTGGTAGCCGTGTGCATGTCTTCCATTTCGACCAGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAATCTCTTATCCCACTTTTAGAGGAAGCTGAAAGTGTTGTCCCTGAGGACCTGTACCCTACTACACCCGTTAAGCTTGGGGCGACTGCAGGTTTAAGGCTTTTGGAAGGGGATGCTTCTGAAAGGATATTGCAAGCGGTTAGGGATTTGCTCAAGAACAGAAGTACCCTGAACACTCAACCAGATGCAGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAATTAATTATTTATTGGGGAAGTTGGGAAAAAGGTTTTCAAAGACAGTAGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCCATCTCAAGGAACACAGCAAAAAATGCTCCAAAACCACCAGATGGAGAGGAACCTTACATAAAGAAGCTTGTACTCAAGGGAAAGGAATATGACCTCTATGTTCACAGTTATTTGCATTACGGTAGAGAAGCATCTCGTGCCGAGATTTTGAAGGTCACTGATGGCTCCGCTAACCCTTGTATTTTAGCTGGCTTCGATGGGACCTACACATATTCAGGAGCAGACTATAAGGCCTTCGCTCCCATTTCTGGCTCCAGCTACGATGAATGTAGAGAGGTTGTTCTTCAAGCTCTCAAATTGAATGAGTCATGCCCCCATCAAAATTGCACATTTGGTGGTATATGGGATGGTGGAAGGGGAAGTGGACAGAAAATTCTTTTCGGCACTTCATCTTTCTATTATCTGCCTACAGAGATTGGTATCATTGATCTAAATAAACCCAACTCCAAAATTCATCCTGTTGATCTTGAGATTGAAGCTAAACGAGCTTGTGAAACAAAATTGGAGGATGCCAAGTCCACCTATCCAAACCTTGCTGAGGATAGACTTCCATATGTATGCTTGGATATTGCATACCAGTATGCATTGTACACCGATGGATTTGGCCTTGATCCATGGCAAGAGATTACAGTGGCAAATGAAATAGAATATCAGGATGCTCTTGTGGAAGCTGCATGGCCTTTAGGCACTGCCATAGAAGCCATATCGTCATTGCCTAAATTTGATCGATTAATGTATTTTATTTAA
Predicted protein sequences of Glyma.16g043300
>Glyma.16g043300.1.p sequence-type=predicted peptide transcript=Glyma.16g043300.1 locus=Glyma.16g043300 ID=Glyma.16g043300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVLVLWSRGTKNMDFLTLFTLLLLLFIHTALSSTQYHDGNILLTHRKIFPKQEAITSYAVIFDAGSTGSRVHVFHFDQNLDLLRIGNELEFYDKVTPGLSAYADNPQQAAESLIPLLEEAESVVPEDLYPTTPVKLGATAGLRLLEGDASERILQAVRDLLKNRSTLNTQPDAVAIIDGTQEGSYLWVTINYLLGKLGKRFSKTVGVVDLGGGSVQMAYAISRNTAKNAPKPPDGEEPYIKKLVLKGKEYDLYVHSYLHYGREASRAEILKVTDGSANPCILAGFDGTYTYSGADYKAFAPISGSSYDECREVVLQALKLNESCPHQNCTFGGIWDGGRGSGQKILFGTSSFYYLPTEIGIIDLNKPNSKIHPVDLEIEAKRACETKLEDAKSTYPNLAEDRLPYVCLDIAYQYALYTDGFGLDPWQEITVANEIEYQDALVEAAWPLGTAIEAISSLPKFDRLMYFI*






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