SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g033400

Feature Type:gene_model
Chromosome:Gm16
Start:3128522
stop:3133956
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g033400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G00290.1AT JGI N/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
PTHR30566PantherFam YNAI-RELATED MECHANOSENSITIVE ION CHANNEL JGI N/AIEA
PTHR30566:SF5PantherFam MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED JGI N/AIEA
PF00924Pfam Mechanosensitive ion channel JGI N/AIEA

Gene model name correspondences to Glyma.16g033400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g03730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g033400
>Glyma.16g033400.4 sequence-type=CDS polypeptide=Glyma.16g033400.4.p locus=Glyma.16g033400 id=Glyma.16g033400.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCTGTTAGGTCTTCCTCTGTAAGACGGTTGGGGAGCACAATTAAGGGTTCTTTTAGTATGGAATTAGTTCACCATAGTATGTGTATGAATCTTGCAAGGTTTCCGAGTGATTCGTTTAATGATCCTTATTACAAAAGAGAGTTACAGTTTTCTAAGAATCAGTTTAGTAATTTGGCTTCTGAATCCCTTGGAAGTAGTCATCACTTTGGTACTAGAGCCAATGTATTGGTTAAACCAACGTTCTCTGGTTATTGTTTTTGGAGTTCCCTTCCTTTTGCTTCCATGAGCAACCACGTTTTGAATCGTCGAATGTATTCATCGTCGTCGGTGGGTGACAAAGGAAGTAGAGATGGTGGTACAGAAGTTTCTGCTGGTTCTGGTGCGAGTGATATGAATACTGGTGGTGATTCTGTTGTTGGGGGTGATTGGGCTGAGAGGATTAAAGATGCTTGGAAGAGTGTGGCAGAGGCAGCATCATATGCTGGAGATAAGGTTAAAGAAACTTCTGATGATCTCACTCCATATGCTCAGCAGTTGCTTGATTCACACCCGTATCTTGACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACTGCTACCATAATAGCTTGGTTCTTGCTGCCTAGGATTTTGAGGAAATTTCACAAATATGCAATGCAAGGTCCTGTTTCTCTATTGCCAGCAAGCGTGGCTGGGGAGCCAGTTCCTTATGAGAAAAGCTTTTGGGGTGCTATGGAGGATCCAGTGCGATATTTAGTTACCTTCATTGCATTCTCACAAATTGGTGTTATGGTGGCTCCAACAACTATAACCTCACAATATCTTGCTCCCGTTTGGAGGGGTGCAGTGATTGTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCACGGTCATTGTCTAGTCAAAGTTTACTTGGGCTTGATAGGGAGAAAGTGTTTGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGGATAATGGCTTTGGCTGAGGCTTGTGGTGTGGCCGTGCAATCTATTGTGACTGTTGGTGGTATAGGAGGTGTGGCTACTGCTTTTGCTACCAAGGACATTCTTGGCAATGTGTTCAGTGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCGATAGAGGGTCAAGTTGTGGAAATGGGTCTTACTAGCACGTCATTGCTGAGTTCAGAGAAGTTCCCAGTCATTGTGCCAAACTCATTTTTTTCTAGCCAGGTTATTGTGAACAAGTCCCGTGCTGAATATCGCGCCATTATTACTAAAATTCCACTGCAAACTGAGGATTTAAGTAAGATTCCCCAGATATCAGATGATGTAAAAAGCATGCTCAGATCAAATGCAAATGTTTTCTTAGGGAAAGATGTTCCCTACTGTTTCTTATCCCGTATAGAAAGTTCATATGCAGAATTGACTCTTGGATACAACCTCAAACATATGCGCAAAGATGAATTATACTCTGCAGAACAAGATATTCTCTTGCAGGCAGTTCAAATCATTAAGAATCATGGGGTTGCTCTTGGCAGCACATGGCAAGACACGTCTTCTAAATGA

>Glyma.16g033400.5 sequence-type=CDS polypeptide=Glyma.16g033400.5.p locus=Glyma.16g033400 id=Glyma.16g033400.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCTGTTAGGTCTTCCTCTGTAAGACGGTTGGGGAGCACAATTAAGGGTTCTTTTAGTATGGAATTAGTTCACCATAGTATGTGTATGAATCTTGCAAGGTTTCCGAGTGATTCGTTTAATGATCCTTATTACAAAAGAGAGTTACAGTTTTCTAAGAATCAGTTTAGTAATTTGGCTTCTGAATCCCTTGGAAGTAGTCATCACTTTGGTACTAGAGCCAATGTATTGGTTAAACCAACGTTCTCTGGTTATTGTTTTTGGAGTTCCCTTCCTTTTGCTTCCATGAGCAACCACGTTTTGAATCGTCGAATGTATTCATCGTCGTCGGTGGGTGACAAAGGAAGTAGAGATGGTGGTACAGAAGTTTCTGCTGGTTCTGGTGCGAGTGATATGAATACTGGTGGTGATTCTGTTGTTGGGGGTGATTGGGCTGAGAGGATTAAAGATGCTTGGAAGAGTGTGGCAGAGGCAGCATCATATGCTGGAGATAAGGTTAAAGAAACTTCTGATGATCTCACTCCATATGCTCAGCAGTTGCTTGATTCACACCCGTATCTTGACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACTGCTACCATAATAGCTTGGTTCTTGCTGCCTAGGATTTTGAGGAAATTTCACAAATATGCAATGCAAGGTCCTGTTTCTCTATTGCCAGCAAGCGTGGCTGGGGAGCCAGTTCCTTATGAGAAAAGCTTTTGGGGTGCTATGGAGGATCCAGTGCGATATTTAGTTACCTTCATTGCATTCTCACAAATTGGTGTTATGGTGGCTCCAACAACTATAACCTCACAATATCTTGCTCCCGTTTGGAGGGGTGCAGTGATTGTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCACGGTCATTGTCTAGTCAAAGTTTACTTGGGCTTGATAGGGAGAAAGTGTTTGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGGATAATGGCTTTGGCTGAGGCTTGTGGTGTGGCCGTGCAATCTATTGTGACTGTTGGTGGTATAGGAGGTGTGGCTACTGCTTTTGCTACCAAGGACATTCTTGGCAATGTGTTCAGTGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCGATAGAGGGTCAAGTTGTGGAAATGGGTCTTACTAGCACGTCATTGCTGAGTTCAGAGAAGTTCCCAGTCATTGTGCCAAACTCATTTTTTTCTAGCCAGGTTATTGTGAACAAGTCCCGTGCTGAATATCGCGCCATTATTACTAAAATTCCACTGCAAACTGAGGATTTAAGTAAGATTCCCCAGATATCAGATGATGTAAAAAGCATGCTCAGATCAAATGCAAATGTTTTCTTAGGGAAAGATGTTCCCTACTGTTTCTTATCCCGTATAGAAAGTTCATATGCAGAATTGACTCTTGGATACAACCTCAAACATATGCGCAAAGATGAATTATACTCTGCAGAACAAGATATTCTCTTGCAGGCAGTTCAAATCATTAAGAATCATGGGGTTGCTCTTGGCAGCACATGGCAAGACACGTCTTCTAAATGA
Predicted protein sequences of Glyma.16g033400
>Glyma.16g033400.4.p sequence-type=predicted peptide transcript=Glyma.16g033400.4 locus=Glyma.16g033400 id=Glyma.16g033400.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAVRSSSVRRLGSTIKGSFSMELVHHSMCMNLARFPSDSFNDPYYKRELQFSKNQFSNLASESLGSSHHFGTRANVLVKPTFSGYCFWSSLPFASMSNHVLNRRMYSSSSVGDKGSRDGGTEVSAGSGASDMNTGGDSVVGGDWAERIKDAWKSVAEAASYAGDKVKETSDDLTPYAQQLLDSHPYLDKVVIPVGGTLTATIIAWFLLPRILRKFHKYAMQGPVSLLPASVAGEPVPYEKSFWGAMEDPVRYLVTFIAFSQIGVMVAPTTITSQYLAPVWRGAVIVSFVWFLHRWKTNVFARSLSSQSLLGLDREKVFALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFATKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTSTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYRAIITKIPLQTEDLSKIPQISDDVKSMLRSNANVFLGKDVPYCFLSRIESSYAELTLGYNLKHMRKDELYSAEQDILLQAVQIIKNHGVALGSTWQDTSSK*

>Glyma.16g033400.5.p sequence-type=predicted peptide transcript=Glyma.16g033400.5 locus=Glyma.16g033400 id=Glyma.16g033400.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAVRSSSVRRLGSTIKGSFSMELVHHSMCMNLARFPSDSFNDPYYKRELQFSKNQFSNLASESLGSSHHFGTRANVLVKPTFSGYCFWSSLPFASMSNHVLNRRMYSSSSVGDKGSRDGGTEVSAGSGASDMNTGGDSVVGGDWAERIKDAWKSVAEAASYAGDKVKETSDDLTPYAQQLLDSHPYLDKVVIPVGGTLTATIIAWFLLPRILRKFHKYAMQGPVSLLPASVAGEPVPYEKSFWGAMEDPVRYLVTFIAFSQIGVMVAPTTITSQYLAPVWRGAVIVSFVWFLHRWKTNVFARSLSSQSLLGLDREKVFALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFATKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTSTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYRAIITKIPLQTEDLSKIPQISDDVKSMLRSNANVFLGKDVPYCFLSRIESSYAELTLGYNLKHMRKDELYSAEQDILLQAVQIIKNHGVALGSTWQDTSSK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo