SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g031000

Feature Type:gene_model
Chromosome:Gm16
Start:2919270
stop:2920388
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g031000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G46150.1AT JGI N/AIEA
PTHR31852PantherFam LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY JGI N/AIEA
PF03168Pfam Late embryogenesis abundant protein JGI N/AIEA

Proteins Associated with Glyma.16g031000
LocusGene SymbolProtein Name
LEA2-87 late embryogenesis abundant 2 gene 87

Gene model name correspondences to Glyma.16g031000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g03440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g031000
>Glyma.16g031000.1 sequence-type=CDS polypeptide=Glyma.16g031000.1.p locus=Glyma.16g031000 id=Glyma.16g031000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTAGAGACGGAGCAAGCAAGACCATTAGCCCCATCAATAGAGCGCCAAAGCAGCGATGAGGATAACACCACTCCACACCCTCAAACACAAGGCCACAAAAAACTCATCAAACGTTGTGCTTGCCCATTAATCTCTTTACTTCTCATAGCAATAGTGATCATAGTTTTAATCTTCACAGTATTTCGTGTCAAGGACCCCGTGATCACAATGAACAGCATCAAGATCACAAAGCTCCAACTTGTCAACACCATGTCACAACAACCCGGGGCCAACATGTCCTTAGTCGCTGACGTGTCGGTGAAGAACCCTAACGTTGCATCCTTTAGGTATAGCAACACCACCACGAGTTTGTACTACCATGGTGTCATTGTGGGGGAGGCTAGAGGACCACCTGGGAGGGCCAAGGCCAGAAGAACATTGAGGATGAATGTCACAATTGATGTCATCACCGCTCGCGTCATTTCTAGCCCGGATTTTGTGACGGATTTAGGTTCCGGGTTGTTGACTATGAGCAGCTTCTCTAGAGTTCCTGGGCAGGTCAAGATCTTGAACTTGATTAAGAGACATGTTGTTGTGAAAATGAATTGCACCACCACTTTTAATATTTCCACACAGGCGATTAAGGAGCAAAGTTGTAAGCGGAAGGTTAAACTTTAG
Predicted protein sequences of Glyma.16g031000
>Glyma.16g031000.1.p sequence-type=predicted peptide transcript=Glyma.16g031000.1 locus=Glyma.16g031000 id=Glyma.16g031000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLETEQARPLAPSIERQSSDEDNTTPHPQTQGHKKLIKRCACPLISLLLIAIVIIVLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSPDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVKL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo