Report for Sequence Feature Glyma.16g029000
| Feature Type: | gene_model |
| Chromosome: | Gm16 |
| Start: | 2756007 |
| stop: | 2761390 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.16g029000
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT2G46270.1 | AT |
GBF3 |
JGI | N/A | IEA |
| GO:0006355 | GO-bp |
regulation of transcription, DNA-templated |
JGI | N/A | IEA |
| GO:0003700 | GO-mf |
DNA-binding transcription factor activity |
JGI | N/A | IEA |
| GO:0043565 | GO-mf |
sequence-specific DNA binding |
JGI | N/A | IEA |
| K09060 | KEGG |
Transcription factors |
JGI | N/A | IEA |
| KOG3584 |
KOG |
cAMP response element binding protein and related transcription factors |
JGI | N/A | IEA |
| PTHR22952 | PantherFam |
CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED |
JGI | N/A | IEA |
| PF00170 | Pfam |
bZIP transcription factor |
JGI | N/A | IEA |
| PF07777 | Pfam |
G-box binding protein MFMR |
JGI | N/A | IEA |
| PF16596 | Pfam |
Disordered region downstream of MFMR |
JGI | N/A | IEA |
Proteins Associated with Glyma.16g029000
| Locus | Gene Symbol | Protein Name |
|---|
| | GBF2 | G-box binding factor |
| | bZIP130 | Basic leucine zipper transcription factor-like protein gene 130 |
Gene model name correspondences to Glyma.16g029000 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma16g03190 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.16g029000
>Glyma.16g029000.1 sequence-type=CDS polypeptide=Glyma.16g029000.1.p locus=Glyma.16g029000 id=Glyma.16g029000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAACAGTGAGGAAGAGAAATCTGTTAAAACTGGAAGTCCTTCTTCTTCACCTGCAACAACTGAGCAGACCAACCAACCTAATATTCACGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGGCCGCCACAGCCTATGATGCAACCTTATGGGCCACCTTATGCAGCATTTTATTCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACACTCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCGTAGAATCACCAACCAAATTCTCTGGAAATACTAATCAGGGTTTAGTGAAGAAATTGAAAGGGTTTGATGAGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGAGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGCGACGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAAGGAAAAGAAGCCGAGAAGGAACACCGATCACTGATGCAGAAGGGAAAACTGAGCTACAAAATGGTCCGGCTTCCAAAGAGACTGCATCTTCCAAAAAGATTGTGTCAGCTACCCCAGCTAGTGTTGCAGGAACATTAGTTGGACCTGTAGTTTCTTCAGGTATGGCCACAGCACTGGAGCTGAGGAACCCTTCGACTGTTCATTCTAAGGCAAATTCCACAAGTGCCGCACAACCTTGTGCAGTTGTGCGTAATGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAGAATGTGTCTCTGAAGTCAGAAATAACTCGACTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACCAAGGGAAGAGATAACTTTGAGCAGCATTGACAGCAAGAGGGCTGCACCTGTAAGTACAGAAAACTTGTTATCAAGAGTTAACAATTCCGGAGCTAATGATAGAACTGCAGAGAATGAGAATGATATCTGCGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTAATGCTGTAGCAGCTGGTTGA
>Glyma.16g029000.2 sequence-type=CDS polypeptide=Glyma.16g029000.2.p locus=Glyma.16g029000 id=Glyma.16g029000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAACAGTGAGGAAGAGAAATCTGTTAAAACTGGAAGTCCTTCTTCTTCACCTGCAACAACTGAGCAGACCAACCAACCTAATATTCACGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGGCCGCCACAGCCTATGATGCAACCTTATGGGCCACCTTATGCAGCATTTTATTCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACACTCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCGTAGAATCACCAACCAAATTCTCTGGAAATACTAATCAGGGTTTAGTGAAGAAATTGAAAGGGTTTGATGAGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGAGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGCGACGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAAGGAAAAGAAGCCGAGAAGGAACACCGATCACTGCAGATGCAGAAGGGAAAACTGAGCTACAAAATGGTCCGGCTTCCAAAGAGACTGCATCTTCCAAAAAGATTGTGTCAGCTACCCCAGCTAGTGTTGCAGGAACATTAGTTGGACCTGTAGTTTCTTCAGGTATGGCCACAGCACTGGAGCTGAGGAACCCTTCGACTGTTCATTCTAAGGCAAATTCCACAAGTGCCGCACAACCTTGTGCAGTTGTGCGTAATGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAGAATGTGTCTCTGAAGTCAGAAATAACTCGACTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACCAAGGGAAGAGATAACTTTGAGCAGCATTGACAGCAAGAGGGCTGCACCTGTAAGTACAGAAAACTTGTTATCAAGAGTTAACAATTCCGGAGCTAATGATAGAACTGCAGAGAATGAGAATGATATCTGCGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTAATGCTGTAGCAGCTGGTTGA
Predicted protein sequences of Glyma.16g029000
>Glyma.16g029000.1.p sequence-type=predicted peptide transcript=Glyma.16g029000.1 locus=Glyma.16g029000 id=Glyma.16g029000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGNSEEEKSVKTGSPSSSPATTEQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMQPYGPPYAAFYSHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSVESPTKFSGNTNQGLVKKLKGFDELAMSIGNCNAESAERGAENRLSQSVDTEGSSDGSDGNTAGANQTKRKRSREGTPITDAEGKTELQNGPASKETASSKKIVSATPASVAGTLVGPVVSSGMATALELRNPSTVHSKANSTSAAQPCAVVRNETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITRLTEGSEQMRMENSALREKLINTQLGPREEITLSSIDSKRAAPVSTENLLSRVNNSGANDRTAENENDICENKPNSGAKLHQLLDTNPRANAVAAG*
>Glyma.16g029000.2.p sequence-type=predicted peptide transcript=Glyma.16g029000.2 locus=Glyma.16g029000 id=Glyma.16g029000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGNSEEEKSVKTGSPSSSPATTEQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMQPYGPPYAAFYSHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSVESPTKFSGNTNQGLVKKLKGFDELAMSIGNCNAESAERGAENRLSQSVDTEGSSDGSDGNTAGANQTKRKRSREGTPITADAEGKTELQNGPASKETASSKKIVSATPASVAGTLVGPVVSSGMATALELRNPSTVHSKANSTSAAQPCAVVRNETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITRLTEGSEQMRMENSALREKLINTQLGPREEITLSSIDSKRAAPVSTENLLSRVNNSGANDRTAENENDICENKPNSGAKLHQLLDTNPRANAVAAG*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
