SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g020500

Feature Type:gene_model
Chromosome:Gm16
Start:1866342
stop:1868393
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g020500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G32640.1AT ATMYC2,JAI1,JIN1,MYC2,RD22BP1,ZBF1 JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR11514PantherFam MYC JGI N/AIEA
PTHR11514:SF40PantherFam TRANSCRIPTION FACTOR BHLH14 JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA
PF14215Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal JGI N/AIEA

Gene model name correspondences to Glyma.16g020500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g02320 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g020500
>Glyma.16g020500.1 sequence-type=CDS polypeptide=Glyma.16g020500.1.p locus=Glyma.16g020500 id=Glyma.16g020500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGAATTAATCATATCTCCTTCTTCATCTTCCTCTTTGGTCTCTCTTTCCCAAGAAAACCCAACACCAACCCTTCAACAAAAACTTCAATTTCTCCTCCAAAGCCAACCCGATTGGTGGGTCTACGCCATTTTCTGGCAAGCCTCACACGACGACAATGGCAACCTCTACTTATCCTTCGGAGAGGGCCATTTCCAAGGCACCAAAGAAACTTCCCCAAAATCACTAACCATTCCCACAAAGAATAAGTTCCTGATGAAAACACCCACAAACGATAACATCAACGACGCCGAGTGGTTCTACGTCATGTCGTTGACTCGCAGCTTCGCAGTCAACAACAATTCTTCTTCAAACTCCACTTCTTGTTCTTCTTCTTCTTCTTCACTCCCTGGCAAGTCTTTTGCTTTAGGCTCGGTTCTCTGGCAAAACAACAGGCACGAGCTTCAATTCTACAACTGCGAGAGATCCAACGAGGCGCACATGCACGGGATTGAAACGTTAATTTGCATCCCGACACAAAACGGGGTCGTCGAAATGGGATCCTACGACACCATCAAACAAAACTGGAACCTCGTACAGCACGTGAAGTCTCTCTTCCATACCTCTCCAGATCCGGTTACTGTCCAAATCCTCGACGACCACATCATCTCCTTCGCCGACATCGGCATCGTTGCCGGAATCCAAGAAACCAAAAAACGAAAACAAATTACCCAAACAGCACCCAGCAAAAACGACAACTATGTCGACTCCGAACACTCTGATTCGGATTGTCCCACGTTGCCAACCGCCACCACCCCGACAGCCTCGGAGCCGAAGAAAAGAGGGAGAAAACCTGTTCTCGGACGCGAGACTCCGATAAACCACGTGGAGGCAGAACGACAAAGAAGGGAGAAGCTCAACCATCGGTTCTATGCCTTACGAGCTGTTGTTCCGAATGTTTCGAGGATGGACAAGGCTTCGTTGTTGTCCGACGCTGTCGCCTACATCAACGAACTGAAGGCGAAGATTGAGGACTTGGAGTCGCAGCAGCCGAGAGACAGTAATAAAAAAATGAAGACAGAAATGACTGACACTCTGGATAACCAGAGTGCCACGACCACATCAACCGTCGTGGATCAAAGCGGGTCTGGATCCAGATTAGGTCTAGGCCCCCTTGGACTCGAGGTTGATGTAAGGATCGTGGGGCCCGATGCCATGGTGAGGGTACAATCAGAAAATGTGAACCACCCTGGGGCTAGGCTAATGGGTGCTTTAAGAGACCTAGAGTTTCAGGTTCACCACGCTAGCATGTCTTGTGTTAATGATCTCATGCTTCAAGATGTGGTCGTTAAGCTTCCCAACGGAATGAGGAGTGAAGAGAGTCTTAAATCTGCTATTATCATGAGGTTGGATCAGTGA
Predicted protein sequences of Glyma.16g020500
>Glyma.16g020500.1.p sequence-type=predicted peptide transcript=Glyma.16g020500.1 locus=Glyma.16g020500 id=Glyma.16g020500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEELIISPSSSSSLVSLSQENPTPTLQQKLQFLLQSQPDWWVYAIFWQASHDDNGNLYLSFGEGHFQGTKETSPKSLTIPTKNKFLMKTPTNDNINDAEWFYVMSLTRSFAVNNNSSSNSTSCSSSSSSLPGKSFALGSVLWQNNRHELQFYNCERSNEAHMHGIETLICIPTQNGVVEMGSYDTIKQNWNLVQHVKSLFHTSPDPVTVQILDDHIISFADIGIVAGIQETKKRKQITQTAPSKNDNYVDSEHSDSDCPTLPTATTPTASEPKKRGRKPVLGRETPINHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKAKIEDLESQQPRDSNKKMKTEMTDTLDNQSATTTSTVVDQSGSGSRLGLGPLGLEVDVRIVGPDAMVRVQSENVNHPGARLMGALRDLEFQVHHASMSCVNDLMLQDVVVKLPNGMRSEESLKSAIIMRLDQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo