SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g015300

Feature Type:gene_model
Chromosome:Gm16
Start:1325622
stop:1328287
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g015300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G54770.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
KOG0149 KOG Predicted RNA-binding protein SEB4 (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.16g015300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g01780 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g015300
>Glyma.16g015300.1 sequence-type=CDS polypeptide=Glyma.16g015300.1.p locus=Glyma.16g015300 id=Glyma.16g015300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTATGATGAGCAGCAGCAACAACAACGTTGGAGAATTTGGAGACACCACTCTGACCAAGGTTTTTGTTGGGGGCTTAGCTTGGGAGACTCCGAAGGATGCCCTTAAAGACCACTTTGAGAAGTATGGTCAGATCCTTGAAGCTGTCATCATTTCCGATAAGCACACTGGCAAATCCAAAGGCTATGGCTTTGTGACTTTCAAGGAGGCTGAGGCTGCCAAGAAGGCTTGTGAGAATTCAACAACTCTCATTATCAATGGCCGTCGAGCGAATTGCAATCTTGCTTTCCTAGGTGCTCGTCGCCCAAGGTCTTCTTCCAATGTTTCACCTCCTCCACCGCAAGCACAAGGGGGATCCAACGGTGGAATAGTGAAGAATGTTAACAATGCATCAGGTCCACCACCAGCCATTAATCACGTGCAGCCATATTATTATCCAGTGAGGACAACTGCTCTGCCATTCCATAATCACACTCTTCCTTTCTATGGGTATGCGCCTACCTACATTGTTACTGACGTAAACTACAATTACAATCAGAATCAGAAACTGTGCTATGGTAGCGGTGGGGCCTACATGAATGGGCAGCATGTGTACCCGAGGCAGGCTATTGTGGGCGGCAACACACTGATGCCAATGTATCCTCTCTATCAGTATCACCATCCAACGGAGACCATTGGCGTGCCAGCTCATCACAACTTTTATCAAACGGCACCGTGGGTCCCAATGACCATCATGTCCAAGCCATCGTCTATCGTTCCTCACACAGGTACAGTTGGCACAGGTGAGTGTTTTAAAAGGGTTGTCTGA
Predicted protein sequences of Glyma.16g015300
>Glyma.16g015300.1.p sequence-type=predicted peptide transcript=Glyma.16g015300.1 locus=Glyma.16g015300 id=Glyma.16g015300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTMMSSSNNNVGEFGDTTLTKVFVGGLAWETPKDALKDHFEKYGQILEAVIISDKHTGKSKGYGFVTFKEAEAAKKACENSTTLIINGRRANCNLAFLGARRPRSSSNVSPPPPQAQGGSNGGIVKNVNNASGPPPAINHVQPYYYPVRTTALPFHNHTLPFYGYAPTYIVTDVNYNYNQNQKLCYGSGGAYMNGQHVYPRQAIVGGNTLMPMYPLYQYHHPTETIGVPAHHNFYQTAPWVPMTIMSKPSSIVPHTGTVGTGECFKRVV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo