SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g008700

Feature Type:gene_model
Chromosome:Gm16
Start:735266
stop:742312
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g008700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G17420.1AT LOX3 JGI N/AIEA
1.13.11.12EC linoleate 13S-lipoxygenase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0016702GO-mf oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K00454KEGG alpha-Linolenic acid metabolism JGI N/AIEA
PTHR11771PantherFam LIPOXYGENASE JGI N/AIEA
PF00305Pfam Lipoxygenase JGI N/AIEA
PF01477Pfam PLAT/LH2 domain JGI N/AIEA

Gene model name correspondences to Glyma.16g008700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g01070 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g008700
>Glyma.16g008700.1 sequence-type=CDS polypeptide=Glyma.16g008700.1.p locus=Glyma.16g008700 id=Glyma.16g008700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCCTTACAAAACAAATAATGGGTTCTTCATTGCTAGAGAGGTCCATGTTTGTTCCTTCTTCTTCTTCCCCTTCATCATTTTTTAACTCAACTCGGTTCTTAGTTCCTTTGGAGAACAAGAGAGTTGTGAGGATGAAGAGAGCTGCAAAGTTTCCTGTGGCAGCTATAAGTGAGGATTTGATGAAGGGTTCTTCTTCTTCTCCTTCATCATCTTCATCCTCTTCTTCTGTGTCTACAGAAAAACCAGTGAAATTCAAAGTTAGAGCTGTGATCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACCATTGTGAAGCATATTGATGCTCTTACTGACAGGATTGGAAGGAATGTTGTCCTTGAACTTGTTAGCACTGAGATTGATCCAAAGACCAAATCTGCAAAGAAGAGTAATGAAGCAGTGTTGAAGGATTGGTCAAAGAAGTCCAATCTTAAGGCAGAGAGAGTTAATTACACGGCTGAATTCATAGTTGACTCTAGTTTTGGGGAGCCAGGAGCTATTACTGTGACAAACAAACACCAGAAAGAGTTCTTCTTGGAAAGCATAACAATTGAAGGATTTGCTAGTGGACCGGTTCATTTCCCCTGCAATTCATGGGTACAATCAAGAAAAGATCTTCCTGGAAAGAGGATTTTCTTTTCCAATAAGCCTTATTTACCCGGGGATACACCTGCTGGACTTAGATTATTGAGGGAGAAAGAGCTGAGAAATCTTAGAGGTGATGGCAAAGGAGTTAGAAACTTATCTGACAGAATATATGACTATGATATATACAATGATTTGGGGAATCCAGATAAAGGAATTGAACTTGCCAGACCAAATCTTGGAGGATCAGATATGTATCCATACCCAAGACGGTGTCGTACTGGCCGCGAACCAAGTGATACAGATATGTACGCAGAGAGTCGTGTGGAGAAGCCACTGCCTATGTATGTGCCAAGAGATGAACGTTTCGAGGAGTCTAAGCAGAACACATTCACTGTGAAGAGGCTCAAGGCAGTGCTGCATAACTTGATCCCAGGTCTTAAGGCTAGCCTTTCTTCTAGCAACCAAGACTTCAATGAATTCTCTGATGTCGATGGCCTTTACAGTGAAGGGTTGCTCATAAAGTTGGGGTGGGGCTTGCAAGATGACGTGTTGAAGAAAATCCCATTTGTCAGCAAGATCCAAGAGTCCAGCCAGGGACTTCTTAAGTATGACACCCCTAAGATTATTTCCAAGGACAAATTTGCTTGGCTGCGAGATGATGAATTTGCCCGTCAAGCAATAGCAGGAGTTAACCCTGTTAACATTGAGAGGCTTCAAGTTTTCCCACCAGTTAGCAAACTAGACCCAGAAATTTATGGCCCCCAAGAGTCTGCTCTTAAAGAAGAACATATTTTGAACCAACTCAATGGCATGACCGTTCAAGAGGCAATAAACGAAAACAAGCTGTTTATGATTGATTATCATGATATATATCTACCTTTCTTAGAAGGGATCAATGCCCTTGATGGTAGGAAATCATATGCCACACGCACCATCTTTTTCTTGACTCCACGTAGCACTCTCAAGCCTGTGGCTATAGAACTTAGCCTCCCTCACGCTGGACCTAATTCCCGATCAAAGCGCGTGGTTACACCTCCTGTTGATGCTACTACTAATTGGATGTGGCAGCTTGCCAAGGCCCATGTTTGCTCCAATGATGCTGGGGTGCACCAACTTGTTAACCATTGGCTACGCACACATGCCAACTTGGAACCATTTATATTGGCGGCTCATAGGCAATTAAGTGCTATGCATCCAATTTTCAAGTTGTTGGACCCCCACATGAGGTACACCTTGGAGATAAATACCTTGGCTAGACAGAGTTTGATCCATGCTGATGGAATCATTGAAAATTGCTTCACTCCTGGTCGCTATGCCATGGAGATTAGTTCTGCTGCTTACAAGAACTTTTGGCGCTTTGACATGGATAGCCTCCCTGCAGATCTTATCCGCAGGGGAATGGCAGTAGCTGACCCAACACAACCACATGGCCTAAAACTCATATTGGAAGACTACCCTTATGCAGCTGATGGAATACTAATATGGTCTGCAATAGAAGACTGGGTTCGAACCTATGTGAACCATTACTACCCTCACTCAAGCCTTATATGCAATGACAAAGAGCTACAATCTTGGTACTCTGAGTCAATCAATGTAGGCCATGCGGATCTTAGGCACGAAAATTGGTGGCCAACATTGAACAATAGTGAGGATCTTGTGTCCATTCTTTCCACATTGATTTGGAATGCATCTGCACAACATGCTGCTCTCAACTTTGGTCAGTACCCTTATGGTGGCTATGTGCCTAATCGTCCACCACTGATGAGAAGGCTAATACCAGAAGAGGGTGATCCAGAATATGCAAGTTTCATTGCTGACCCTCAGAAGTATTTCCTGAATGCATTGCCAAGCTTGCTTCAGGCCACAAAGTTCATGGCTGTGGTTGACACACTCTCTACTCACTCACCTGATGAGGAGTACTTGGGTGAGAGGCAACAACCTTCCATTTGGTCTGGCGACGCTGAGATTGTAGAGGCGTTCTACGATTTCTCCGCCAAGGTTCAACAGATAGAGAAGGTGATTGATGGCAGGAACCTTGATAGGACTCTAAGGAACCGTTGCGGTGCAGGGGTGTTGCCTTATGAGTTGCTTGCTCCTAGCTCTGAACCTGGTGTTACATGCAGAGGGGTGCCTAATAGTGTGTCCACATAA

>Glyma.16g008700.2 sequence-type=CDS polypeptide=Glyma.16g008700.2.p locus=Glyma.16g008700 id=Glyma.16g008700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATCCATACCCAAGACGGTGTCGTACTGGCCGCGAACCAAGTGATACAGATATGTACGCAGAGAGTCGTGTGGAGAAGCCACTGCCTATGTATGTGCCAAGAGATGAACGTTTCGAGGAGTCTAAGCAGAACACATTCACTGTGAAGAGGCTCAAGGCAGTGCTGCATAACTTGATCCCAGGTCTTAAGGCTAGCCTTTCTTCTAGCAACCAAGACTTCAATGAATTCTCTGATGTCGATGGCCTTTACAGTGAAGGGTTGCTCATAAAGTTGGGGTGGGGCTTGCAAGATGACGTGTTGAAGAAAATCCCATTTGTCAGCAAGATCCAAGAGTCCAGCCAGGGACTTCTTAAGTATGACACCCCTAAGATTATTTCCAAGGACAAATTTGCTTGGCTGCGAGATGATGAATTTGCCCGTCAAGCAATAGCAGGAGTTAACCCTGTTAACATTGAGAGGCTTCAAGTTTTCCCACCAGTTAGCAAACTAGACCCAGAAATTTATGGCCCCCAAGAGTCTGCTCTTAAAGAAGAACATATTTTGAACCAACTCAATGGCATGACCGTTCAAGAGGCAATAAACGAAAACAAGCTGTTTATGATTGATTATCATGATATATATCTACCTTTCTTAGAAGGGATCAATGCCCTTGATGGTAGGAAATCATATGCCACACGCACCATCTTTTTCTTGACTCCACGTAGCACTCTCAAGCCTGTGGCTATAGAACTTAGCCTCCCTCACGCTGGACCTAATTCCCGATCAAAGCGCGTGGTTACACCTCCTGTTGATGCTACTACTAATTGGATGTGGCAGCTTGCCAAGGCCCATGTTTGCTCCAATGATGCTGGGGTGCACCAACTTGTTAACCATTGGCTACGCACACATGCCAACTTGGAACCATTTATATTGGCGGCTCATAGGCAATTAAGTGCTATGCATCCAATTTTCAAGTTGTTGGACCCCCACATGAGGTACACCTTGGAGATAAATACCTTGGCTAGACAGAGTTTGATCCATGCTGATGGAATCATTGAAAATTGCTTCACTCCTGGTCGCTATGCCATGGAGATTAGTTCTGCTGCTTACAAGAACTTTTGGCGCTTTGACATGGATAGCCTCCCTGCAGATCTTATCCGCAGGGGAATGGCAGTAGCTGACCCAACACAACCACATGGCCTAAAACTCATATTGGAAGACTACCCTTATGCAGCTGATGGAATACTAATATGGTCTGCAATAGAAGACTGGGTTCGAACCTATGTGAACCATTACTACCCTCACTCAAGCCTTATATGCAATGACAAAGAGCTACAATCTTGGTACTCTGAGTCAATCAATGTAGGCCATGCGGATCTTAGGCACGAAAATTGGTGGCCAACATTGAACAATAGTGAGGATCTTGTGTCCATTCTTTCCACATTGATTTGGAATGCATCTGCACAACATGCTGCTCTCAACTTTGGTCAGTACCCTTATGGTGGCTATGTGCCTAATCGTCCACCACTGATGAGAAGGCTAATACCAGAAGAGGGTGATCCAGAATATGCAAGTTTCATTGCTGACCCTCAGAAGTATTTCCTGAATGCATTGCCAAGCTTGCTTCAGGCCACAAAGTTCATGGCTGTGGTTGACACACTCTCTACTCACTCACCTGATGAGGAGTACTTGGGTGAGAGGCAACAACCTTCCATTTGGTCTGGCGACGCTGAGATTGTAGAGGCGTTCTACGATTTCTCCGCCAAGGTTCAACAGATAGAGAAGGTGATTGATGGCAGGAACCTTGATAGGACTCTAAGGAACCGTTGCGGTGCAGGGGTGTTGCCTTATGAGTTGCTTGCTCCTAGCTCTGAACCTGGTGTTACATGCAGAGGGGTGCCTAATAGTGTGTCCACATAA

>Glyma.16g008700.3 sequence-type=CDS polypeptide=Glyma.16g008700.3.p locus=Glyma.16g008700 id=Glyma.16g008700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCCTTACAAAACAAATAATGGGTTCTTCATTGCTAGAGAGGTCCATGTTTGTTCCTTCTTCTTCTTCCCCTTCATCATTTTTTAACTCAACTCGGTTCTTAGTTCCTTTGGAGAACAAGAGAGTTGTGAGGATGAAGAGAGCTGCAAAGTTTCCTGTGGCAGCTATAAGTGAGGATTTGATGAAGGGTTCTTCTTCTTCTCCTTCATCATCTTCATCCTCTTCTTCTGTGTCTACAGAAAAACCAGTGAAATTCAAAGTTAGAGCTGTGATCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACCATTGTGAAGCATATTGATGCTCTTACTGACAGGATTGGAAGGAATGTTGTCCTTGAACTTGTTAGCACTGAGATTGATCCAAAGACCAAATCTGCAAAGAAGAGTAATGAAGCAGTGTTGAAGGATTGGTCAAAGAAGTCCAATCTTAAGGCAGAGAGAGTTAATTACACGGCTGAATTCATAGTTGACTCTAGTTTTGGGGAGCCAGGAGCTATTACTGTGACAAACAAACACCAGAAAGAGTTCTTCTTGGAAAGCATAACAATTGAAGGATTTGCTAGTGGACCGGTTCATTTCCCCTGCAATTCATGGGTACAATCAAGAAAAGATCTTCCTGGAAAGAGGATTTTCTTTTCCAATAAGCCTTATTTACCCGGGGATACACCTGCTGGACTTAGATTATTGAGGGAGAAAGAGCTGAGAAATCTTAGAGGTGATGGCAAAGGAGTTAGAAACTTATCTGACAGAATATATGACTATGATATATACAATGATTTGGGGAATCCAGATAAAGGAATTGAACTTGCCAGACCAAATCTTGGAGGATCAGATATGTATCCATACCCAAGACGGTGTCGTACTGGCCGCGAACCAAGTGATACAGATATGTACGCAGAGAGTCGTGTGGAGAAGCCACTGCCTATGTATGTGCCAAGAGATGAACGTTTCGAGGAGTCTAAGCAGAACACATTCACTGTGAAGAGGCTCAAGGCAGTGCTGCATAACTTGATCCCAGGTCTTAAGGCTAGCCTTTCTTCTAGCAACCAAGACTTCAATGAATTCTCTGATGTCGATGGCCTTTACAGTGAAGGGTTGCTCATAAAGTTGGGGTGGGGCTTGCAAGATGACGTGTTGAAGAAAATCCCATTTGTCAGCAAGATCCAAGAGTCCAGCCAGGGACTTCTTAAGTATGACACCCCTAAGATTATTTCCAAGGACAAATTTGCTTGGCTGCGAGATGATGAATTTGCCCGTCAAGCAATAGCAGGAGTTAACCCTGTTAACATTGAGAGGCTTCAAGTTTTCCCACCAGTTAGCAAACTAGACCCAGAAATTTATGGCCCCCAAGAGTCTGCTCTTAAAGAAGAACATATTTTGAACCAACTCAATGGCATGACCGTTCAAGAGGCAATAAACGAAAACAAGCTGTTTATGATTGATTATCATGATATATATCTACCTTTCTTAGAAGGGATCAATGCCCTTGATGGTAGGAAATCATATGCCACACGCACCATCTTTTTCTTGACTCCACGTAGCACTCTCAAGCCTGTGGCTATAGAACTTAGCCTCCCTCACGCTGGACCTAATTCCCGATCAAAGCGCGTGGTTACACCTCCTGTTGATGCTACTACTAATTGGATGTGGCAGCTTGCCAAGGCCCATGTTTGCTCCAATGATGCTGGGGTGCACCAACTTGTTAACCATTGGTAA
Predicted protein sequences of Glyma.16g008700
>Glyma.16g008700.1.p sequence-type=predicted peptide transcript=Glyma.16g008700.1 locus=Glyma.16g008700 id=Glyma.16g008700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALTKQIMGSSLLERSMFVPSSSSPSSFFNSTRFLVPLENKRVVRMKRAAKFPVAAISEDLMKGSSSSPSSSSSSSSVSTEKPVKFKVRAVITVRNKIKEDFKETIVKHIDALTDRIGRNVVLELVSTEIDPKTKSAKKSNEAVLKDWSKKSNLKAERVNYTAEFIVDSSFGEPGAITVTNKHQKEFFLESITIEGFASGPVHFPCNSWVQSRKDLPGKRIFFSNKPYLPGDTPAGLRLLREKELRNLRGDGKGVRNLSDRIYDYDIYNDLGNPDKGIELARPNLGGSDMYPYPRRCRTGREPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFTVKRLKAVLHNLIPGLKASLSSSNQDFNEFSDVDGLYSEGLLIKLGWGLQDDVLKKIPFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIERLQVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAINENKLFMIDYHDIYLPFLEGINALDGRKSYATRTIFFLTPRSTLKPVAIELSLPHAGPNSRSKRVVTPPVDATTNWMWQLAKAHVCSNDAGVHQLVNHWLRTHANLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINTLARQSLIHADGIIENCFTPGRYAMEISSAAYKNFWRFDMDSLPADLIRRGMAVADPTQPHGLKLILEDYPYAADGILIWSAIEDWVRTYVNHYYPHSSLICNDKELQSWYSESINVGHADLRHENWWPTLNNSEDLVSILSTLIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEEGDPEYASFIADPQKYFLNALPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIVEAFYDFSAKVQQIEKVIDGRNLDRTLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST*

>Glyma.16g008700.2.p sequence-type=predicted peptide transcript=Glyma.16g008700.2 locus=Glyma.16g008700 id=Glyma.16g008700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYPYPRRCRTGREPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFTVKRLKAVLHNLIPGLKASLSSSNQDFNEFSDVDGLYSEGLLIKLGWGLQDDVLKKIPFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIERLQVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAINENKLFMIDYHDIYLPFLEGINALDGRKSYATRTIFFLTPRSTLKPVAIELSLPHAGPNSRSKRVVTPPVDATTNWMWQLAKAHVCSNDAGVHQLVNHWLRTHANLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINTLARQSLIHADGIIENCFTPGRYAMEISSAAYKNFWRFDMDSLPADLIRRGMAVADPTQPHGLKLILEDYPYAADGILIWSAIEDWVRTYVNHYYPHSSLICNDKELQSWYSESINVGHADLRHENWWPTLNNSEDLVSILSTLIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEEGDPEYASFIADPQKYFLNALPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIVEAFYDFSAKVQQIEKVIDGRNLDRTLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST*

>Glyma.16g008700.3.p sequence-type=predicted peptide transcript=Glyma.16g008700.3 locus=Glyma.16g008700 id=Glyma.16g008700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALTKQIMGSSLLERSMFVPSSSSPSSFFNSTRFLVPLENKRVVRMKRAAKFPVAAISEDLMKGSSSSPSSSSSSSSVSTEKPVKFKVRAVITVRNKIKEDFKETIVKHIDALTDRIGRNVVLELVSTEIDPKTKSAKKSNEAVLKDWSKKSNLKAERVNYTAEFIVDSSFGEPGAITVTNKHQKEFFLESITIEGFASGPVHFPCNSWVQSRKDLPGKRIFFSNKPYLPGDTPAGLRLLREKELRNLRGDGKGVRNLSDRIYDYDIYNDLGNPDKGIELARPNLGGSDMYPYPRRCRTGREPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFTVKRLKAVLHNLIPGLKASLSSSNQDFNEFSDVDGLYSEGLLIKLGWGLQDDVLKKIPFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIERLQVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAINENKLFMIDYHDIYLPFLEGINALDGRKSYATRTIFFLTPRSTLKPVAIELSLPHAGPNSRSKRVVTPPVDATTNWMWQLAKAHVCSNDAGVHQLVNHW*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo