SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16g001800

Feature Type:gene_model
Chromosome:Gm16
Start:100250
stop:101959
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.16g001800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G09630.1AT ATRAB-A2A,ATRAB11C,ATRABA2A,RAB-A2A,RAB11c JGI N/AIEA
GO:0005525GO-mf GTP binding JGI N/AIEA
K07904KEGG GTP-binding proteins JGI N/AIEA
KOG0087 KOG GTPase Rab11/YPT3, small G protein superfamily JGI N/AIEA
PTHR24073PantherFam DRAB5-RELATED JGI N/AIEA
PF00025Pfam ADP-ribosylation factor family JGI N/AIEA

Gene model name correspondences to Glyma.16g001800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma16g00350 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16g001800
>Glyma.16g001800.1 sequence-type=CDS polypeptide=Glyma.16g001800.1.p locus=Glyma.16g001800 id=Glyma.16g001800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCGGAGAGCAGAGGAAGAGTACGATTACCTGTTCAAGGTTGTACTGATCGGTGATTCCGGTGTTGGAAAATCCAATCTTCTGTCCCGATTCACTCGCAACGAGTTTTGCCTCGAATCCAAGTCCACCATTGGAGTCGAATTCGCCACTCGCACTCTTCAGGTGGAGGGAAGAACTGTGAAAGCTCAAATATGGGATACCGCCGGACAGGAACGATACAGAGCAATTACCAGTGCATACTACAGGGGTGCCCTTGGAGCTCTTCTAGTCTACGATGTAACTAAACCAACCACATTCGAAAACGTCAGCCGATGGCTGAAGGAGCTAAGGGATCATGCCGATGCTAACATTGTCATCATGTTGATAGGGAACAAGACCGATCTCAAGCATCTCAGAGCTGTTGCCACCGAGGATGCCCAGGGTTATTCCGAGAAGGAAGGCCTTTCTTTCATCGAGACTTCTGCTCTCGAAGCAACTAATGTTGAGAAGGCTTTCCAGACTATTCTTGCAGAGATATACCGCATTATCAGTAAGAAATCACTCTCTTCCAATGAGCCTGCATCTGCCAATATTAAAGAAGGCATGACTATCACTGTTGGGGGACCCCAATCCAACGCAAGCAAGCCTTCTTGCTGTACATCATCTTGA
Predicted protein sequences of Glyma.16g001800
>Glyma.16g001800.1.p sequence-type=predicted peptide transcript=Glyma.16g001800.1 locus=Glyma.16g001800 id=Glyma.16g001800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSLSSNEPASANIKEGMTITVGGPQSNASKPSCCTSS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo