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Report for Sequence Feature Glyma.16G067200

Feature Type:gene_model
Chromosome:Gm16
Start:6658305
stop:6665699
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.16G067200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G03420.1AT Ku70-binding family protein JGI N/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0004222GO-mf metalloendopeptidase activity EnsemblGenomesN/AIEA
GO:0004222GO-mf metalloendopeptidase activity JGI N/AIEA
GO:0008233GO-mf peptidase activity EnsemblGenomesN/AIEA
GO:0008237GO-mf metallopeptidase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG3314 KOG Ku70-binding protein JGI N/AIEA
PTHR21711Panther KUB3-PROV PROTEIN JGI N/AIEA
PF09768PFAM Peptidase M76 family JGI N/AIEA

Expression Patterns of Glyma.16G067200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16G067200 not represented in the dataset
Glyma.16G067200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.16G067200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.16g067200 Wm82.a4.v1ISS As supplied by JGI
Glyma16g07260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16G067200
>Glyma.16g067200.1 sequence-type=CDS polypeptide=Glyma.16g067200.1.p locus=Glyma.16g067200 ID=Glyma.16g067200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAATGAAGACAATCTCTCTTCCTCCGACTCTTCCACACAGCGCCGCGGCGTAACTGTGGACCAGTGCCAACGCATGATTCATAAGAGTCTCCTTTCTCCGCAGGTGAAGTTCCTGAGGGAACATTTGGAGAAAGCTGGGTGTCTCGTTGGAGATAATTTCATAAAAGCTGTTAAGTGTGACAACATTGCAATAGCTGGTGGTTATACTCAGGGTGAAGGGATAGTTGTGTGCTGCAACGAGATGGAATCTCAAGATGATGTTGACCAGCTGTTAAAGCATGAGCTAATTCATGTATTTGATGACTGTCGTGCTGGAAACTTGGATTGGACAAAATGTGCTCACCATGCTTGTAGCGAGATAAGAGCTGGTCATCTAAGTGGTGATTGCCATTTCAAACGGGAACTTCTTAAATTAGCTTCTCTGAAAATTCGAGGGCATGAACAAGAATGCATCAGAAGAAGAGTTATGAAATCATTGTCTGCAAATCCTTATTGCTCTGGTGTGGCAAAGGCTTCTATGGAATCTGTATGGGATGTTTGTTACAATGATACAAAGCCTTATGACAGAGCTCCTTAA
Predicted protein sequences of Glyma.16G067200
>Glyma.16g067200.1.p sequence-type=predicted peptide transcript=Glyma.16g067200.1 locus=Glyma.16g067200 ID=Glyma.16g067200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNEDNLSSSDSSTQRRGVTVDQCQRMIHKSLLSPQVKFLREHLEKAGCLVGDNFIKAVKCDNIAIAGGYTQGEGIVVCCNEMESQDDVDQLLKHELIHVFDDCRAGNLDWTKCAHHACSEIRAGHLSGDCHFKRELLKLASLKIRGHEQECIRRRVMKSLSANPYCSGVAKASMESVWDVCYNDTKPYDRAP*






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