Glyma.16G058100

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Report for Sequence Feature Glyma.16G058100

Feature Type:	gene_model
Chromosome:	Gm16
Start:	5685464
stop:	5692098
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.16G058100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G14180.1	AT	Myzus persicae-induced lipase 1	JGI	N/A	IEA
GO:0006629	GO-bp	lipid metabolic process	EnsemblGenomes	N/A	IEA
GO:0006629	GO-bp	lipid metabolic process	JGI	N/A	IEA
GO:0016042	GO-bp	lipid catabolic process	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016788	GO-mf	hydrolase activity, acting on ester bonds	EnsemblGenomes	N/A	IEA
KOG2624	KOG	Triglyceride lipase-cholesterol esterase	JGI	N/A	IEA
PTHR11005	Panther	LYSOSOMAL ACID LIPASE-RELATED	JGI	N/A	IEA
PF00561	PFAM	alpha/beta hydrolase fold	JGI	N/A	IEA
PF04083	PFAM	Partial alpha/beta-hydrolase lipase region	JGI	N/A	IEA
LIPAS-PWY	SoyCyc9	triacylglycerol degradation	Plant Metabolic Network		ISS
GN7V-55985	SoyCyc9-rxn	triacylglycerol lipase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.16G058100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.16G058100 not represented in the dataset	Glyma.16G058100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.16G058100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.16g058100	Wm82.a4.v1	ISS	As supplied by JGI
Glyma16g06230	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.16G058100

Limit To All Plant Sequences

>Glyma.16g058100.2 sequence-type=transcript locus=Glyma.16g058100 ID=Glyma.16g058100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTGTTTCTTCCTTGCCAATACAGCATAGGAACATGGTTCCCACTAGAgatggtatgacatggcttctaaacccaccagagcaagatctgccgttgattttagctgataatggatttgacgtgtggattgcaaacacaagaggaaccagatatagtcgccgacacatctcattggacccctctagccagGCCTATTGGAATTGGTCTTGGGATGAACTTGTCTCCTATGATTTCCCTGCGGTGTTTAATTATGTGTTCAGCCAAACGGGGCAGAAGATCAATTACGTTGGCCATTCATTGGGAACTTTGGTAGCTTTGGCATCCTTCTCGGAAGGAAAATTGGTTAACCAGCTGAAATCAGCAGCCTTGTTGAGCCCTATAGCCTATTTAAGCCACATGAATACAGCACTTGGTGTTGTTGCAGCCAAGTCCTTTGTTGGTGAGATCACTACCCTCTTCGGTCTAGCAGAATTTAATCCAAAAGGGTTAGCTGTTGATGCCTTTCTCAAGTCTCTCTGTGCTCACCCTGGGATAGACTGCTATGACTTGTTGACTGCACTAACTGGTAAAAATTGCTGCCTCAATTCTTCAACTGTTGATCTATTCTTGATGAATGAGCCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCTCAGACTGTTAGACTTGGGGCGTTGACAAAATTCAATTATGTGAGACCAGACTATAACATTATGCACTATGGAGAAATATTTCCTCCAATCTATAACCTTTCCAACATCCCCCACGATCTCCCTCTCTTCATTAGCTATGGTGGAAGAGATGCACTTTCAGATGTCCGTGATGTTGAGAATTTGCTTGATAAACTCAAGTTCCATGATGAGAACAAGCGCAGCGTTCAGTTCATCCAGGAATATGCTCATGCTGACTACATTATGGGGTTCAATGCCAAGGACTTGGTGTATAATGCTGTTCTTTCATTTTTCAATCATCAAGTTTAACACTGGATAGAATGAATCAAGTTGTATGAAAAGAGTGCCTTCATGTATTAGGTAGCTATCATTGAGATCAATCTAAGTTATCTAGTGGAGATTAAGTAACGGCTAATTACAAAAGTAATGAAGTATTATCACTAGTGATTTGCTTTGGTGTTGCAAATGGCTATTGCATCTATCTATTGTGTTGCATTGTAATGCAGAGGAAAGTGGCTTTTGGCTTCAGTTATCTAAGATGAAAAACGTGGATGAGATCATTTATCAAAAGAATTATAAAAACTATGTTTCCAAACCATGATGAAGCATATGTATATGTATGTGTGCAAAGTGCTCACCACTGTTTACATTATACGTAGGAAGGTTTCCAAAAATATATGCAT

Coding sequences of Glyma.16G058100

Limit To All Plant Sequences

>Glyma.16g058100.1 sequence-type=CDS polypeptide=Glyma.16g058100.1.p locus=Glyma.16g058100 ID=Glyma.16g058100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTCTTCTAGGCTTAATGAGTTTTGCTGCCTTGACCCTTTTCTTGGTCCTAACAACTGTGCCTCGTCAAGCACACGCTTCAAGCCGTGGCAACTTAGGCAGAAACATCAACCCTTCAGTGTATGGCATATGTGCCTCTTCTGTCATTGTGCATGGATACAAGTGTCAAGAACACGAGGTTACAACTGATGATGGTTACATTCTGAGCCTGCAAAGGATCCCAGAAGGTCGAGGTAAAAGCAGTGGGAGTGGGACAAGGAAGCAACCAGTGGTTATACAACATGGAGTTCTTGTAGATGGTATGACATGGCTTCTAAACCCACCAGAGCAAGATCTGCCGTTGATTTTAGCTGATAATGGATTTGACGTGTGGATTGCAAACACAAGAGGAACCAGATATAGTCGCCGACACATCTCATTGGACCCCTCTAGCCAGGCCTATTGGAATTGGTCTTGGGATGAACTTGTCTCCTATGATTTCCCTGCGGTGTTTAATTATGTGTTCAGCCAAACGGGGCAGAAGATCAATTACGTTGGCCATTCATTGGGAACTTTGGTAGCTTTGGCATCCTTCTCGGAAGGAAAATTGGTTAACCAGCTGAAATCAGCAGCCTTGTTGAGCCCTATAGCCTATTTAAGCCACATGAATACAGCACTTGGTGTTGTTGCAGCCAAGTCCTTTGTTGGTGAGATCACTACCCTCTTCGGTCTAGCAGAATTTAATCCAAAAGGGTTAGCTGTTGATGCCTTTCTCAAGTCTCTCTGTGCTCACCCTGGGATAGACTGCTATGACTTGTTGACTGCACTAACTGGTAAAAATTGCTGCCTCAATTCTTCAACTGTTGATCTATTCTTGATGAATGAGCCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCTCAGACTGTTAGACTTGGGGCGTTGACAAAATTCAATTATGTGAGACCAGACTATAACATTATGCACTATGGAGAAATATTTCCTCCAATCTATAACCTTTCCAACATCCCCCACGATCTCCCTCTCTTCATTAGCTATGGTGGAAGAGATGCACTTTCAGATGTCCGTGATGTTGAGAATTTGCTTGATAAACTCAAGTTCCATGATGAGAACAAGCGCAGCGTTCAGTTCATCCAGGAATATGCTCATGCTGACTACATTATGGGGTTCAATGCCAAGGACTTGGTGTATAATGCTGTTCTTTCATTTTTCAATCATCAAGTTTAA

>Glyma.16g058100.2 sequence-type=CDS polypeptide=Glyma.16g058100.2.p locus=Glyma.16g058100 ID=Glyma.16g058100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTCCCACTAGAGATGGTATGACATGGCTTCTAAACCCACCAGAGCAAGATCTGCCGTTGATTTTAGCTGATAATGGATTTGACGTGTGGATTGCAAACACAAGAGGAACCAGATATAGTCGCCGACACATCTCATTGGACCCCTCTAGCCAGGCCTATTGGAATTGGTCTTGGGATGAACTTGTCTCCTATGATTTCCCTGCGGTGTTTAATTATGTGTTCAGCCAAACGGGGCAGAAGATCAATTACGTTGGCCATTCATTGGGAACTTTGGTAGCTTTGGCATCCTTCTCGGAAGGAAAATTGGTTAACCAGCTGAAATCAGCAGCCTTGTTGAGCCCTATAGCCTATTTAAGCCACATGAATACAGCACTTGGTGTTGTTGCAGCCAAGTCCTTTGTTGGTGAGATCACTACCCTCTTCGGTCTAGCAGAATTTAATCCAAAAGGGTTAGCTGTTGATGCCTTTCTCAAGTCTCTCTGTGCTCACCCTGGGATAGACTGCTATGACTTGTTGACTGCACTAACTGGTAAAAATTGCTGCCTCAATTCTTCAACTGTTGATCTATTCTTGATGAATGAGCCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCTCAGACTGTTAGACTTGGGGCGTTGACAAAATTCAATTATGTGAGACCAGACTATAACATTATGCACTATGGAGAAATATTTCCTCCAATCTATAACCTTTCCAACATCCCCCACGATCTCCCTCTCTTCATTAGCTATGGTGGAAGAGATGCACTTTCAGATGTCCGTGATGTTGAGAATTTGCTTGATAAACTCAAGTTCCATGATGAGAACAAGCGCAGCGTTCAGTTCATCCAGGAATATGCTCATGCTGACTACATTATGGGGTTCAATGCCAAGGACTTGGTGTATAATGCTGTTCTTTCATTTTTCAATCATCAAGTTTAA

Predicted protein sequences of Glyma.16G058100

Limit To All Plant Sequences

>Glyma.16g058100.1.p sequence-type=predicted peptide transcript=Glyma.16g058100.1 locus=Glyma.16g058100 ID=Glyma.16g058100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALLGLMSFAALTLFLVLTTVPRQAHASSRGNLGRNINPSVYGICASSVIVHGYKCQEHEVTTDDGYILSLQRIPEGRGKSSGSGTRKQPVVIQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRYSRRHISLDPSSQAYWNWSWDELVSYDFPAVFNYVFSQTGQKINYVGHSLGTLVALASFSEGKLVNQLKSAALLSPIAYLSHMNTALGVVAAKSFVGEITTLFGLAEFNPKGLAVDAFLKSLCAHPGIDCYDLLTALTGKNCCLNSSTVDLFLMNEPQSTSTKNMVHLAQTVRLGALTKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGRDALSDVRDVENLLDKLKFHDENKRSVQFIQEYAHADYIMGFNAKDLVYNAVLSFFNHQV*

>Glyma.16g058100.2.p sequence-type=predicted peptide transcript=Glyma.16g058100.2 locus=Glyma.16g058100 ID=Glyma.16g058100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVPTRDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRYSRRHISLDPSSQAYWNWSWDELVSYDFPAVFNYVFSQTGQKINYVGHSLGTLVALASFSEGKLVNQLKSAALLSPIAYLSHMNTALGVVAAKSFVGEITTLFGLAEFNPKGLAVDAFLKSLCAHPGIDCYDLLTALTGKNCCLNSSTVDLFLMNEPQSTSTKNMVHLAQTVRLGALTKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGRDALSDVRDVENLLDKLKFHDENKRSVQFIQEYAHADYIMGFNAKDLVYNAVLSFFNHQV*

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