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Report for Sequence Feature Glyma.15g266800

Feature Type:gene_model
Chromosome:Gm15
Start:50301070
stop:50305210
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g266800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G79250.1AT AGC kinase 1.7 JGI N/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0035556GO-bp intracellular signal transduction EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0004674GO-mf protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
KOG0610 KOG Putative serine/threonine protein kinase JGI N/AIEA
PTHR24351Panther RIBOSOMAL PROTEIN S6 KINASE JGI N/AIEA
PTHR24351:SF88Panther JGI N/AIEA
PF00069PFAM Protein kinase domain JGI N/AIEA

Expression Patterns of Glyma.15g266800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g266800 not represented in the dataset
Glyma.15g266800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.15g266800
ParalogEvidenceComments
Glyma.08g160400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15g266800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g42115 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.15g266800
>Glyma.15g266800.2 sequence-type=transcript locus=Glyma.15g266800 ID=Glyma.15g266800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATACATCTTCGCTTACAAAAAAGAACTTGATTATTTATGGTTACATGGTTTCACATTAAAGGCATTGAGCAAGAATTGAGTACTTTTGGTTTGTTATATTATGGAAAGACCAACAACTAGCTTCTTATATTAAATGAATTCCTCCTGAGGGGTGTTTTTGTGTTGCCTATTGATGACATCAAATCCTGTCAAGATGCCTGATTTACCTGAGACACAGATGGAGCACAAGTTATCAGAAGCGGCACACCCTAGTGCTCATAGTAGTAGTGCAAATTCAGGAAACAACTCACCAACTCATCCCAAGAATGTGAACCAAGAAGCAAAAGACACCAGCACAACAACTGTCCACTACTCAGGAAATGAAACTGGACATATGGACCAGGCTTCCAAAACTGAAGCAAATttggaaggtaaatccagaccccagaacttactgccaccaaacaggaacttatctgacttcaaccctcaacaacaccaaagtccaagcacaaagaagcctaattcaaattctgatcatcatgcaaaggcaatgtctgtgtctacccctcaaacaaagaccagtaccaatcaagGTCAAGGGAGTGGTGCTAGTTCTCGGAGTGATAGCTTAGAGAGCACAAGTGCACCTATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGATTTCAAGGGTTGGCTCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATCGGTTACGGAGACATTGGGAGTGTGTACCTTGTGGAACTTAAGGGAACTAGGACCTACTTTGCTATGAAAGTTATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATTCTTACTTTGAAACTGATAAGTTTTATTGCTTGatcatggaattctgtagtgggggtgatcttcattctctaagacaaaagcaacctaacaagtGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTGTTGTTAGCTCTCGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCACATAATGCTCTCAGATTTTGATTTATCCCTTCGCTGTTCCGTCAGTCCTACACTAGTCAAGTCTTCTTCCGCCCACGCAGGCAACAGTAGTAGCAGTGGCAACAATGATGTTGGAGGCATATTAACTGATGACCAAGCAGCGCAAAGCACTACTCAGGTATCAAGTTTTTTCCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGTGGAGGACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGCGTTCAATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGGATCTTCTTGTATGAGTTGTTGCTTGGAACGACCCCTTTCAAGGGTTCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAAGTCAGTGCTGTGGCTCGTGACCTTATTAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATATAAGAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTTTAGTTAGAAGTGCCACCCCTCCCCACATACCAGAGGCTATAGATTTCTCCAAGTATGCTAGCAAAGACACAGCAACCCCGGCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAGTGCTACTGATTCTTACATAGATTTTGAGTATTTTTAGCAGTAAAAGTCCTATGGATAAAAATATACTTCTTTGACAAGAATATACTGTACAAAGTGTCACCTCTTCCCCAAAAGCAAATCGAAGAGATCTGAGAAATACACACTGTAAACAAGCATGTAAATTCGTTCAAAAACATTCTTTTTCCCTATGTTTTTTTTTTTACAATGTCTTTAATATTGTTGTAAGGACTTCCTAAGTAGCACTGTTTGCAAAGTTCAGTGTTTAGAATATGTTTTCACAATGAAAAGATGTTTG
Coding sequences of Glyma.15g266800
>Glyma.15g266800.1 sequence-type=CDS polypeptide=Glyma.15g266800.1.p locus=Glyma.15g266800 ID=Glyma.15g266800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACATCAAATCCTGTCAAGATGCCTGATTTACCTGAGACACAGATGGAGCACAAGTTATCAGAAGCGGCACACCCTAGTGCTCATAGTAGTAGTGCAAATTCAGGAAACAACTCACCAACTCATCCCAAGAATGTGAACCAAGAAGCAAAAGACACCAGCACAACAACTGTCCACTACTCAGGAAATGAAACTGGACATATGGACCAGGCTTCCAAAACTGAAGCAAATTTGGAAGGTAAATCCAGACCCCAGAACTTACTGCCACCAAACAGGAACTTATCTGACTTCAACCCTCAACAACACCAAAGTCCAAGCACAAAGAAGCCTAATTCAAATTCTGATCATCATGCAAAGGCAATGTCTGTGTCTACCCCTCAAACAAAGACCAGTACCAATCAAGGTCAAGGGAGTGGTGCTAGTTCTCGGAGTGATAGCTTAGAGAGCACAAGTGCACCTATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGATTTCAAGGGTTGGCTCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATCGGTTACGGAGACATTGGGAGTGTGTACCTTGTGGAACTTAAGGGAACTAGGACCTACTTTGCTATGAAAGTTATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATTCTTACTTTGAAACTGATAAGTTTTATTGCTTGATCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTAAGACAAAAGCAACCTAACAAGTGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTGTTGTTAGCTCTCGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCACATAATGCTCTCAGATTTTGATTTATCCCTTCGCTGTTCCGTCAGTCCTACACTAGTCAAGTCTTCTTCCGCCCACGCAGGCAACAGTAGTAGCAGTGGCAACAATGATGTTGGAGGCATATTAACTGATGACCAAGCAGCGCAAAGCACTACTCAGGTATCAAGTTTTTTCCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGTGGAGGACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGCGTTCAATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGGATCTTCTTGTATGAGTTGTTGCTTGGAACGACCCCTTTCAAGGGTTCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAAGTCAGTGCTGTGGCTCGTGACCTTATTAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATATAAGAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTTTAGTTAGAAGTGCCACCCCTCCCCACATACCAGAGGCTATAGATTTCTCCAAGTATGCTAGCAAAGACACAGCAACCCCGGCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAGTGCTACTGATTCTTACATAGATTTTGAGTATTTTTAG

>Glyma.15g266800.2 sequence-type=CDS polypeptide=Glyma.15g266800.2.p locus=Glyma.15g266800 ID=Glyma.15g266800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACATCAAATCCTGTCAAGATGCCTGATTTACCTGAGACACAGATGGAGCACAAGTTATCAGAAGCGGCACACCCTAGTGCTCATAGTAGTAGTGCAAATTCAGGAAACAACTCACCAACTCATCCCAAGAATGTGAACCAAGAAGCAAAAGACACCAGCACAACAACTGTCCACTACTCAGGAAATGAAACTGGACATATGGACCAGGCTTCCAAAACTGAAGCAAATTTGGAAGGTAAATCCAGACCCCAGAACTTACTGCCACCAAACAGGAACTTATCTGACTTCAACCCTCAACAACACCAAAGTCCAAGCACAAAGAAGCCTAATTCAAATTCTGATCATCATGCAAAGGCAATGTCTGTGTCTACCCCTCAAACAAAGACCAGTACCAATCAAGGTCAAGGGAGTGGTGCTAGTTCTCGGAGTGATAGCTTAGAGAGCACAAGTGCACCTATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGATTTCAAGGGTTGGCTCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATCGGTTACGGAGACATTGGGAGTGTGTACCTTGTGGAACTTAAGGGAACTAGGACCTACTTTGCTATGAAAGTTATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATTCTTACTTTGAAACTGATAAGTTTTATTGCTTGATCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTAAGACAAAAGCAACCTAACAAGTGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTGTTGTTAGCTCTCGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCACATAATGCTCTCAGATTTTGATTTATCCCTTCGCTGTTCCGTCAGTCCTACACTAGTCAAGTCTTCTTCCGCCCACGCAGGCAACAGTAGTAGCAGTGGCAACAATGATGTTGGAGGCATATTAACTGATGACCAAGCAGCGCAAAGCACTACTCAGGTATCAAGTTTTTTCCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGTGGAGGACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGCGTTCAATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGGATCTTCTTGTATGAGTTGTTGCTTGGAACGACCCCTTTCAAGGGTTCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAAGTCAGTGCTGTGGCTCGTGACCTTATTAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATATAAGAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTTTAGTTAGAAGTGCCACCCCTCCCCACATACCAGAGGCTATAGATTTCTCCAAGTATGCTAGCAAAGACACAGCAACCCCGGCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAGTGCTACTGATTCTTACATAGATTTTGAGTATTTTTAG
Predicted protein sequences of Glyma.15g266800
>Glyma.15g266800.1.p sequence-type=predicted peptide transcript=Glyma.15g266800.1 locus=Glyma.15g266800 ID=Glyma.15g266800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTSNPVKMPDLPETQMEHKLSEAAHPSAHSSSANSGNNSPTHPKNVNQEAKDTSTTTVHYSGNETGHMDQASKTEANLEGKSRPQNLLPPNRNLSDFNPQQHQSPSTKKPNSNSDHHAKAMSVSTPQTKTSTNQGQGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMISRVGSLNLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLIMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHAGNSSSSGNNDVGGILTDDQAAQSTTQVSSFFPRILPSKKNRKAKSDFGLLVGGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLLGTTPFKGSGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEAIDFSKYASKDTATPADKKMADIANDKHSNSATDSYIDFEYF*

>Glyma.15g266800.2.p sequence-type=predicted peptide transcript=Glyma.15g266800.2 locus=Glyma.15g266800 ID=Glyma.15g266800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTSNPVKMPDLPETQMEHKLSEAAHPSAHSSSANSGNNSPTHPKNVNQEAKDTSTTTVHYSGNETGHMDQASKTEANLEGKSRPQNLLPPNRNLSDFNPQQHQSPSTKKPNSNSDHHAKAMSVSTPQTKTSTNQGQGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMISRVGSLNLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLIMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHAGNSSSSGNNDVGGILTDDQAAQSTTQVSSFFPRILPSKKNRKAKSDFGLLVGGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLLGTTPFKGSGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEAIDFSKYASKDTATPADKKMADIANDKHSNSATDSYIDFEYF*






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