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Report for Sequence Feature Glyma.15g263900

Feature Type:gene_model
Chromosome:Gm15
Start:49772516
stop:49773501
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g263900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G12250.1AT beta-6 tubulin JGI N/AIEA
GO:0007010GO-bp cytoskeleton organization EnsemblGenomesN/AIEA
GO:0007017GO-bp microtubule-based process EnsemblGenomesN/AIEA
GO:0005874GO-cc microtubule EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0003924GO-mf GTPase activity EnsemblGenomesN/AIEA
GO:0005200GO-mf structural constituent of cytoskeleton EnsemblGenomesN/AIEA
GO:0005525GO-mf GTP binding EnsemblGenomesN/AIEA
PTHR11588Panther TUBULIN JGI N/AIEA
PF00091PFAM Tubulin/FtsZ family, GTPase domain JGI N/AIEA
GN7V-66752SoyCyc9-rxn purine-nucleoside phosphorylase Plant Metabolic Network ISS

Expression Patterns of Glyma.15g263900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g263900 not represented in the dataset
Glyma.15g263900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g263900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g41795 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g263900
>Glyma.15g263900.1 sequence-type=CDS polypeptide=Glyma.15g263900.1.p locus=Glyma.15g263900 ID=Glyma.15g263900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTGAGGCCTGATAATTTCGTGTTCGGCCAAAATGGAGCTGGTAACAACTGGGTTAAAGGGCATTATACTGAGGGAGCTGAGCTTATTGATTTTGTTCTTGATGTTGTTCGAAAAGAAGCTGAGAACTATGACTGCTTGCAGGGGTTGCAAATTTTTCACTCACTGGGAGGAGGAACTGGGTCTGGAATGGGTACCTTGCTTATCTCAAAGATCAGAGAAGAGTATCCGGATAGGATGATGTTGACATTCTTAGTGTTCTTATCTCCAAAGGTCTCTAACACCGTGGTTGAATCCTACAATGCCACTCTCTCTATTCATCAACTAGTTGATATTACTAATGAATGCATGGTCCTTGATAATGAGGCACTTTATGATATCTGTGTTTGTACACTCAAGCTCACAAATCCAAGT
Predicted protein sequences of Glyma.15g263900
>Glyma.15g263900.1.p sequence-type=predicted peptide transcript=Glyma.15g263900.1 locus=Glyma.15g263900 ID=Glyma.15g263900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
LRPDNFVFGQNGAGNNWVKGHYTEGAELIDFVLDVVRKEAENYDCLQGLQIFHSLGGGTGSGMGTLLISKIREEYPDRMMLTFLVFLSPKVSNTVVESYNATLSIHQLVDITNECMVLDNEALYDICVCTLKLTNPS






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