|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G16350.1 | AT | Aldolase-type TIM barrel family protein | JGI | N/A | IEA |
GO:0006164 | GO-bp | purine nucleotide biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0006177 | GO-bp | GMP biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0006183 | GO-bp | GTP biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0009228 | GO-bp | thiamine biosynthetic process | JGI | N/A | IEA |
GO:0055114 | GO-bp | oxidation-reduction process | EnsemblGenomes | N/A | IEA |
GO:0055114 | GO-bp | oxidation-reduction process | JGI | N/A | IEA |
GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
GO:0000166 | GO-mf | nucleotide binding | EnsemblGenomes | N/A | IEA |
GO:0003824 | GO-mf | catalytic activity | EnsemblGenomes | N/A | IEA |
GO:0003824 | GO-mf | catalytic activity | JGI | N/A | IEA |
GO:0003938 | GO-mf | IMP dehydrogenase activity | EnsemblGenomes | N/A | IEA |
GO:0016491 | GO-mf | oxidoreductase activity | EnsemblGenomes | N/A | IEA |
GO:0016491 | GO-mf | oxidoreductase activity | JGI | N/A | IEA |
GO:0018580 | GO-mf | nitronate monooxygenase activity | JGI | N/A | IEA |
GO:0036355 | GO-mf | 2-iminoacetate synthase activity | JGI | N/A | IEA |
GO:0046872 | GO-mf | metal ion binding | EnsemblGenomes | N/A | IEA |
KOG2550 | KOG | IMP dehydrogenase/GMP reductase | JGI | N/A | IEA |
PTHR11911 | Panther | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED | JGI | N/A | IEA |
PTHR11911:SF6 | Panther | INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE | JGI | N/A | IEA |
PF00478 | PFAM | IMP dehydrogenase / GMP reductase domain | JGI | N/A | IEA |
P165-PWY | SoyCyc9 | superpathway of purines degradation in plants | Plant Metabolic Network | ISS | |
PWY-5044 | SoyCyc9 | purine nucleotides degradation I (plants) | Plant Metabolic Network | ISS | |
PWY-5695 | SoyCyc9 | inosine 5'-phosphate degradation | Plant Metabolic Network | ISS | |
PWY-6596 | SoyCyc9 | adenosine nucleotides degradation I | Plant Metabolic Network | ISS | |
PWY-7221 | SoyCyc9 | guanosine ribonucleotides de novo biosynthesis | Plant Metabolic Network | ISS | |
PWY-7228 | SoyCyc9 | superpathway of guanosine nucleotides de novo biosynthesis I | Plant Metabolic Network | ISS | |
PWY-841 | SoyCyc9 | superpathway of purine nucleotides de novo biosynthesis I | Plant Metabolic Network | ISS | |
URSIN-PWY | SoyCyc9 | ureide biosynthesis | Plant Metabolic Network | ISS | |
GN7V-59130 | SoyCyc9-rxn | IMP dehydrogenase | Plant Metabolic Network | ISS |
Locus | Gene Symbol | Protein Name |
---|---|---|
IMPDH1 | inosine monophosphate dehydrogenase |
Glyma.15g263100 not represented in the dataset |
Glyma.15g263100 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.08g164100 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma15g41640 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.15g263100.1 sequence-type=CDS polypeptide=Glyma.15g263100.1.p locus=Glyma.15g263100 ID=Glyma.15g263100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGACTTCACTACGCCGCCGATCGAGGACGGTTTCACCGCCGAGAAGCTCTTCACGCAGGGCTTCTCCTACACCTACGATGACGTCATCTTCCTCCCCCACTACATCGACTTCGCCGCCGACGCCGTGGACCTCTCCACGCGCCTCACGCGCCGTCTCCCCCTCGCCGTGCCGTTTGTGGCCTCTCCTATGGACACCGTGTCGGAGTCCGCCATGGCCGCCGCCATGGCCTCCCTCGGCGGCATCGCCGTCGTCCACTCCAACGTCCCCGCCGCCGTCCAGGCGGCCATCCTCCGCAGAGCGAAGTCCCGCCGCGTCCCCATCCTCTCCGACCCCGCCTTCGCCGCTCCCTCCGCCGTGGTCGAGCACGACGACGCCTTCGGGGCCTCCCCCTTCCTACTCGTCACCGACACTGGCACCTCCGCCGGGAAACTCCTCGGCTATGTCGCGAGGAGCGACTGGACGAATCAAACCGACAAGGGCTTGAGAGTTGGGGACTACATGGCGCCACCTCCCAAGCCGGCGCCATGGAACGCCGACCTAAATAAAATTAATGAAATTATGGAGAGTGAGAAAAGTGGTGCTGTGGCTTTGGAGAGGGATGGTGAGGTGGTTGATTTGGTGGTGAGGGAGGAGGTGGAGAGGGTTAGGGGATACCCAAAGCTGGTGGCGCCGGCTACAGTGGGGGCGGACGGGGAGTTTATGGTGGGGGCTGCGGTGGGGACGAGGGAGGACGATAAGGAGAGGTTGGAGCATTTGGTGAAGGCTGGGTTGAATGTTGTGGTGTTGGATAGTTCTCAAGGGAACTCAATTTATCAGTTGGAGATGGTGAAGTATGTGAAGAGGGTGTACCCTGAGCTTGATGTGATTGGGGGGAATGTTGTGACTATGTACCAGGCTGAGAATCTGATTCAGGCTGGGGTTGATGGGTTGAGGGTTGGAATGGGGTCTGGGTCCATTTGTACTACTCAGGAGGTTTGTGCTGTGGGCCGTGGTCAGGCAACTGCTGTTTACAAGGTCTCATCCATTGCTTATAAAAGTGGTGTTCCTGTGATTGCTGATGGTGGCATCTCGAACTCTGGTCATATTGTTAAGGCTTTGTCATTGGGAGCGTCAACTGTTATGATGGGAAGCTTCTTGGCTGGTAGCCTTGAGGCTCCTGGGGCTTATGTATATCAGAATGGTCAACGTGTCAAAAAGTATAGAGGAATGGGTTCCCTAGAAGCTATGACTAAAGGGAGTGATGCAAGGTACTTGGGTGATACAGCAAAGCTAAAAATTGCTCAGGGGGTTGTTGGAGCTGTTAAAGATAAGGGTTCTGTCTTGAATTTCATACCATACACCTTGCAAGCAGTCAGGCAAGGGTTTCAGGATATCGGTGCCTCCTCTCTACAGTCTGCTCATGACCTTCTAAGATCCAGGGAGTTAAGACTGGAGGTCCGGAGTGGAGCAGCACAGGTTGAAGGTGGAGTTCATGGGCTGGTTTCTTATGAAAAGAAATACTTTTGA
>Glyma.15g263100.1.p sequence-type=predicted peptide transcript=Glyma.15g263100.1 locus=Glyma.15g263100 ID=Glyma.15g263100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDFTTPPIEDGFTAEKLFTQGFSYTYDDVIFLPHYIDFAADAVDLSTRLTRRLPLAVPFVASPMDTVSESAMAAAMASLGGIAVVHSNVPAAVQAAILRRAKSRRVPILSDPAFAAPSAVVEHDDAFGASPFLLVTDTGTSAGKLLGYVARSDWTNQTDKGLRVGDYMAPPPKPAPWNADLNKINEIMESEKSGAVALERDGEVVDLVVREEVERVRGYPKLVAPATVGADGEFMVGAAVGTREDDKERLEHLVKAGLNVVVLDSSQGNSIYQLEMVKYVKRVYPELDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAYKSGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSLEAPGAYVYQNGQRVKKYRGMGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVKDKGSVLNFIPYTLQAVRQGFQDIGASSLQSAHDLLRSRELRLEVRSGAAQVEGGVHGLVSYEKKYF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||