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Report for Sequence Feature Glyma.15g256400

Feature Type:gene_model
Chromosome:Gm15
Start:48553974
stop:48559510
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g256400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G63480.2AT ATP binding microtubule motor family protein JGI N/AIEA
GO:0007018GO-bp microtubule-based movement EnsemblGenomesN/AIEA
GO:0007018GO-bp microtubule-based movement JGI N/AIEA
GO:0008104GO-bp protein localization EnsemblGenomesN/AIEA
GO:0030705GO-bp cytoskeleton-dependent intracellular transport EnsemblGenomesN/AIEA
GO:0005871GO-cc kinesin complex EnsemblGenomesN/AIEA
GO:0005874GO-cc microtubule EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0003774GO-mf motor activity EnsemblGenomesN/AIEA
GO:0003777GO-mf microtubule motor activity EnsemblGenomesN/AIEA
GO:0003777GO-mf microtubule motor activity JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0008017GO-mf microtubule binding EnsemblGenomesN/AIEA
GO:0008017GO-mf microtubule binding JGI N/AIEA
GO:0008574GO-mf ATP-dependent microtubule motor activity, plus-end-directed EnsemblGenomesN/AIEA
KOG0240 KOG Kinesin (SMY1 subfamily) JGI N/AIEA
PTHR24115Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24115:SF128Panther KINESIN-LIKE PROTEIN KIF14 JGI N/AIEA
PF00225PFAM Kinesin motor domain JGI N/AIEA

Expression Patterns of Glyma.15g256400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g256400 not represented in the dataset
Glyma.15g256400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.15g256400
ParalogEvidenceComments
Glyma.08g170500 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15g256400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g40801 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.15g256400
>Glyma.15g256400.2 sequence-type=transcript locus=Glyma.15g256400 ID=Glyma.15g256400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCCATCAATTCCTTTCTTCTCTTTAAGTCTCAACCCACCAAAGGAACGAACAGTTATATATATATCGCCTTATTTGTTTCCCGCCATCAAAGATCACACAAACTTCATTTCGCTGCGAGCAAGCTCTTTCGCGGATTACTGTCTGCGGTGAAATATCATGTCGAATATTACTGTGTGCGCGCGCTTTAGGCCTTCGAATTCGAAAGAGAAGCAAAATGGCAACGACTCTGGCTGCATTCGGAACATAGACTCCGAAACTTTCATTTTCAAGGACGAGAAGGATGAAGAATTTGTGTTTAGCTTTGATAGAGTGTTCTATGAAAAATCCGAGCAATCTGATGTCTATCAATTCCTAGCTCTTCCCATCGTTAGAGATGTTGTTGTTGATGCATTCAATGGGACAATTATCACTTATGGCCAAACTGGAGCTGGGAAGACATATAGTATGGAGGGACCTGGAATACTTGAATGTGAAGAACAGAACAAGGGGCTTCTTCCAAGAGTTGTAGAAGGACTTTTTGATTCCATAAATTCTTTGGATGAAGAGAAGACATATTCAATTAAATTGTCAATGGTTGAAATCTACATGGAAAAAGTAAGGGACTTATTTGATTTATCAAAAGATAATATACAAATTAAGGAGATTAAATCACGAGGAATAATTCTACCTGGGGTTACAGAGATCACTGTACTGGACCCAGCTGAAGCATTGCAAAGTCTATCCAGGGGAATAGCTAATCGGGCAGTTGGTGAGACCCAAATGAACGTGGCCAGCAGCAGAAGTCACTGCATTTATATATTCACAATTCAGCAAGAATTTTTGTCCAGAGATAAAAGGACGAGGTTCGGGAAACTAATTCTAGTGGACTTGGCTGGGTCAGAGAAGGTGGAGAAAACAGGCGCTGAGGGAAGAGTTCTAGAAGAAGCTAAGACCATAAACAAATCCTTGTCTGCACTTGGGAATGTAATCAATTCTCTTACGTGTGGTTTGCCAGGAAAAGCAAGCCATATCCCTTATCGTGATTCCAAACTCACTCGAATTCTTCAGGATGCACTTGGAGGAAATGCTAGAACTGCACTACTCTGTTGTTGCTCCCCCAGCGCTTTTAATGCATCCGAGAGTCTGTCCACACTTCGTTTTGGTGCAAGGGCGAAACATATAAAGGAGTCGCCTCGTGTCAATTTCAGTGAAGAAAAATGTGACACAAGTTCCAGTGCTGCTTCTCCATCTAGAGATGAGTCAAGTGCTAGAATTTTGAACAAGTTGAGGGGAAACTTGAAAGTTGAAGATGTGAAGTTACTAGAGGAATTGTTAATACAAGAGGGCATTCTCTTTGAACCTCCATCAGTAGAAGAGGAGTCAGACATAGAAGACCTTACCTTGCAGATAATATCCTCATTACAAGCAGCTATGGAGAAGCTCACAGCTGCTGTTGACGAGCTGAAAAGGGAGAATAGAATTCTCAGGGCCAATGTTGATGCCTCCACGGAGTCTCTGTTCTACAAGGGAGCAAATAATGGTTCGATTTTTCAAAATATGATTTTGCGTATCCCTACTTTCTTCTTTCGCTGGTTGGGTTACACTTCTTCTCCAACAGGATGGCAGTAACTCTACTGATTCATATGCCATGCCTTGCCAGCCTTTAAATACTATCAAAATAGTAATGGTACATTCGTGGTAACAATGAATAGAAATACTAAATATGCCTCATGCTGATTGACTCATTGTTGGACATTTTGGGGTTAGGCTAATAGCATAGTATATGCTGACAAGATATATATTCCTGAACTTCAACCCACTGATCACAATCAAAAGAAAGCATAGTTTGTTAGCCTCTGTTCTATATGAATAGTAATAATAGGGTTTTTCTATGCAACTTTGCGCAGGTTAAGGCTTATTAAATACCCACCATCAACTAATTTTGACCAATATATTAGGCTTAAATATAATGTTAGTTCTTTT
Coding sequences of Glyma.15g256400
>Glyma.15g256400.1 sequence-type=CDS polypeptide=Glyma.15g256400.1.p locus=Glyma.15g256400 ID=Glyma.15g256400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGAATATTACTGTGTGCGCGCGCTTTAGGCCTTCGAATTCGAAAGAGAAGCAAAATGGCAACGACTCTGGCTGCATTCGGAACATAGACTCCGAAACTTTCATTTTCAAGGACGAGAAGGATGAAGAATTTGTGTTTAGCTTTGATAGAGTGTTCTATGAAAAATCCGAGCAATCTGATGTCTATCAATTCCTAGCTCTTCCCATCGTTAGAGATGTTGTTGTTGATGCATTCAATGGGACAATTATCACTTATGGCCAAACTGGAGCTGGGAAGACATATAGTATGGAGGGACCTGGAATACTTGAATGTGAAGAACAGAACAAGGGGCTTCTTCCAAGAGTTGTAGAAGGACTTTTTGATTCCATAAATTCTTTGGATGAAGAGAAGACATATTCAATTAAATTGTCAATGGTTGAAATCTACATGGAAAAAGTAAGGGACTTATTTGATTTATCAAAAGATAATATACAAATTAAGGAGATTAAATCACGAGGAATAATTCTACCTGGGGTTACAGAGATCACTGTACTGGACCCAGCTGAAGCATTGCAAAGTCTATCCAGGGGAATAGCTAATCGGGCAGTTGGTGAGACCCAAATGAACGTGGCCAGCAGCAGAAGTCACTGCATTTATATATTCACAATTCAGCAAGAATTTTTGTCCAGAGATAAAAGGACGAGGTTCGGGAAACTAATTCTAGTGGACTTGGCTGGGTCAGAGAAGGTGGAGAAAACAGGCGCTGAGGGAAGAGTTCTAGAAGAAGCTAAGACCATAAACAAATCCTTGTCTGCACTTGGGAATGTAATCAATTCTCTTACGTGTGGTTTGCCAGGAAAAGCAAGCCATATCCCTTATCGTGATTCCAAACTCACTCGAATTCTTCAGGATGCACTTGGAGGAAATGCTAGAACTGCACTACTCTGTTGTTGCTCCCCCAGCGCTTTTAATGCATCCGAGAGTCTGTCCACACTTCGTTTTGGTGCAAGGGCGAAACATATAAAGGAGTCGCCTCGTGTCAATTTCAGTGAAGAAAAATGTGACACAAGTTCCAGTGCTGCTTCTCCATCTAGAGATGAGTCAAGTGCTAGAATTTTGAACAAGTTGAGGGGAAACTTGAAAGTTGAAGATGTGAAGTTACTAGAGGAATTGTTAATACAAGAGGGCATTCTCTTTGAACCTCCATCAGTAGAAGAGGAGTCAGACATAGAAGACCTTACCTTGCAGATAATATCCTCATTACAAGCAGCTATGGAGAAGCTCACAGCTGCTGTTGACGAGCTGAAAAGGGAGAATAGAATTCTCAGGGCCAATGTTGATGCCTCCACGGAGTCTCTGTTCTACAAGGGAGCAAATAATGGTTCGATTTTTCAAAATATGATTTTGCGTATCCCTACTTTCTTCTTTCGCTGGTTGGGTTACACTTCTTCTCCAACAGGATGGCAGTAA

>Glyma.15g256400.2 sequence-type=CDS polypeptide=Glyma.15g256400.2.p locus=Glyma.15g256400 ID=Glyma.15g256400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGAATATTACTGTGTGCGCGCGCTTTAGGCCTTCGAATTCGAAAGAGAAGCAAAATGGCAACGACTCTGGCTGCATTCGGAACATAGACTCCGAAACTTTCATTTTCAAGGACGAGAAGGATGAAGAATTTGTGTTTAGCTTTGATAGAGTGTTCTATGAAAAATCCGAGCAATCTGATGTCTATCAATTCCTAGCTCTTCCCATCGTTAGAGATGTTGTTGTTGATGCATTCAATGGGACAATTATCACTTATGGCCAAACTGGAGCTGGGAAGACATATAGTATGGAGGGACCTGGAATACTTGAATGTGAAGAACAGAACAAGGGGCTTCTTCCAAGAGTTGTAGAAGGACTTTTTGATTCCATAAATTCTTTGGATGAAGAGAAGACATATTCAATTAAATTGTCAATGGTTGAAATCTACATGGAAAAAGTAAGGGACTTATTTGATTTATCAAAAGATAATATACAAATTAAGGAGATTAAATCACGAGGAATAATTCTACCTGGGGTTACAGAGATCACTGTACTGGACCCAGCTGAAGCATTGCAAAGTCTATCCAGGGGAATAGCTAATCGGGCAGTTGGTGAGACCCAAATGAACGTGGCCAGCAGCAGAAGTCACTGCATTTATATATTCACAATTCAGCAAGAATTTTTGTCCAGAGATAAAAGGACGAGGTTCGGGAAACTAATTCTAGTGGACTTGGCTGGGTCAGAGAAGGTGGAGAAAACAGGCGCTGAGGGAAGAGTTCTAGAAGAAGCTAAGACCATAAACAAATCCTTGTCTGCACTTGGGAATGTAATCAATTCTCTTACGTGTGGTTTGCCAGGAAAAGCAAGCCATATCCCTTATCGTGATTCCAAACTCACTCGAATTCTTCAGGATGCACTTGGAGGAAATGCTAGAACTGCACTACTCTGTTGTTGCTCCCCCAGCGCTTTTAATGCATCCGAGAGTCTGTCCACACTTCGTTTTGGTGCAAGGGCGAAACATATAAAGGAGTCGCCTCGTGTCAATTTCAGTGAAGAAAAATGTGACACAAGTTCCAGTGCTGCTTCTCCATCTAGAGATGAGTCAAGTGCTAGAATTTTGAACAAGTTGAGGGGAAACTTGAAAGTTGAAGATGTGAAGTTACTAGAGGAATTGTTAATACAAGAGGGCATTCTCTTTGAACCTCCATCAGTAGAAGAGGAGTCAGACATAGAAGACCTTACCTTGCAGATAATATCCTCATTACAAGCAGCTATGGAGAAGCTCACAGCTGCTGTTGACGAGCTGAAAAGGGAGAATAGAATTCTCAGGGCCAATGTTGATGCCTCCACGGAGTCTCTGTTCTACAAGGGAGCAAATAATGGTTCGATTTTTCAAAATATGATTTTGCGTATCCCTACTTTCTTCTTTCGCTGGTTGGGTTACACTTCTTCTCCAACAGGATGGCAGTAA
Predicted protein sequences of Glyma.15g256400
>Glyma.15g256400.1.p sequence-type=predicted peptide transcript=Glyma.15g256400.1 locus=Glyma.15g256400 ID=Glyma.15g256400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSNITVCARFRPSNSKEKQNGNDSGCIRNIDSETFIFKDEKDEEFVFSFDRVFYEKSEQSDVYQFLALPIVRDVVVDAFNGTIITYGQTGAGKTYSMEGPGILECEEQNKGLLPRVVEGLFDSINSLDEEKTYSIKLSMVEIYMEKVRDLFDLSKDNIQIKEIKSRGIILPGVTEITVLDPAEALQSLSRGIANRAVGETQMNVASSRSHCIYIFTIQQEFLSRDKRTRFGKLILVDLAGSEKVEKTGAEGRVLEEAKTINKSLSALGNVINSLTCGLPGKASHIPYRDSKLTRILQDALGGNARTALLCCCSPSAFNASESLSTLRFGARAKHIKESPRVNFSEEKCDTSSSAASPSRDESSARILNKLRGNLKVEDVKLLEELLIQEGILFEPPSVEEESDIEDLTLQIISSLQAAMEKLTAAVDELKRENRILRANVDASTESLFYKGANNGSIFQNMILRIPTFFFRWLGYTSSPTGWQ*

>Glyma.15g256400.2.p sequence-type=predicted peptide transcript=Glyma.15g256400.2 locus=Glyma.15g256400 ID=Glyma.15g256400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSNITVCARFRPSNSKEKQNGNDSGCIRNIDSETFIFKDEKDEEFVFSFDRVFYEKSEQSDVYQFLALPIVRDVVVDAFNGTIITYGQTGAGKTYSMEGPGILECEEQNKGLLPRVVEGLFDSINSLDEEKTYSIKLSMVEIYMEKVRDLFDLSKDNIQIKEIKSRGIILPGVTEITVLDPAEALQSLSRGIANRAVGETQMNVASSRSHCIYIFTIQQEFLSRDKRTRFGKLILVDLAGSEKVEKTGAEGRVLEEAKTINKSLSALGNVINSLTCGLPGKASHIPYRDSKLTRILQDALGGNARTALLCCCSPSAFNASESLSTLRFGARAKHIKESPRVNFSEEKCDTSSSAASPSRDESSARILNKLRGNLKVEDVKLLEELLIQEGILFEPPSVEEESDIEDLTLQIISSLQAAMEKLTAAVDELKRENRILRANVDASTESLFYKGANNGSIFQNMILRIPTFFFRWLGYTSSPTGWQ*






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