Report for Sequence Feature Glyma.15g253200
Feature Type: gene_model
Chromosome: Gm15
Start: 48156162
stop: 48160901
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.15g253200
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G64130.1 AT
cAMP-regulated phosphoprotein 19-related protein
JGI N/A IEA
GO:0032515 GO-bp
negative regulation of phosphoprotein phosphatase activity
EnsemblGenomes N/A IEA
GO:0035308 GO-bp
negative regulation of protein dephosphorylation
EnsemblGenomes N/A IEA
GO:0043086 GO-bp
negative regulation of catalytic activity
EnsemblGenomes N/A IEA
GO:0005737 GO-cc
cytoplasm
EnsemblGenomes N/A IEA
GO:0004864 GO-mf
protein phosphatase inhibitor activity
EnsemblGenomes N/A IEA
PF04667 PFAM
cAMP-regulated phosphoprotein/endosulfine conserved region
JGI N/A IEA
Expression Patterns of Glyma.15g253200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.15g253200
Paralog Evidence Comments
Glyma.08g174000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.15g253200 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma15g40390 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.15g253200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.15g253200.2 sequence-type=transcript locus=Glyma.15g253200 ID=Glyma.15g253200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAGGATAGAGAACTCTACTCAAAGGATAGCATACTTAGAACATTAAATTGAAAAAACCAGTTTAGATAGGAAAGAAAAACCCAACAAACTAATAGTTAagagagagaaagagagacatagttagagagagagcagagaCACCGTTCGGAGCTCAGCTGAATACGGTTGTGGCCCCAGCGCTCCGTTTTACACTCAAAAAGACCTCATGTCTAACATAGAGGAGAACAAATATCTAGGACAGATGGACGTGAATGCATCTGATAAGTCAGCTAACATGCCATCATCCCAAAAGCAGGAGGAGGCTGTAAAGAAAAAGTATGGAGGAATGCTGCCCAAAAAGCCGCCACTCATATCTAAGGACCATGAGCGTGCTTACTTTGATTCTGCGGATTGGGCACTTGGAAAGCAAGGCGGAGACAAGCCTAAGGGGCCACTTGAAGCTCTTCGGCCTAAATTACAGCCGACGCAGCAGCAAACACGTTACCGGAAATCTCCATATGCTCCTTCAGGAGAAGAAGGGGGAAGTGTTCCAGCCGAGGATGTGCCTTCGAACGAGTAAGCAGTAGTCAGTCTTTTGATGATGTGCTGACAATTGTTCTCATTCCTGCCCTGAGTGAGTAGGTATCACTTTTTGTTGTTTTCAACAATAAAGGAAGCTTATCATGTATTCATTAACTAACTAAATTGCCATGTGTTGTTGTCCTTTTCAACAATAAAGGAAGCTTATCATGTATTCATATTAGCACAAGACAAGTGATTTGATCTACACCTACACAATAGACATTTACTTGGGATTA
Coding sequences of Glyma.15g253200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.15g253200.1 sequence-type=CDS polypeptide=Glyma.15g253200.1.p locus=Glyma.15g253200 ID=Glyma.15g253200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTAACATAGAGGAGAACAAATATCTAGGACAGATGGACGTGAATGCATCTGATAAGTCAGCTAACATGCCATCATCCCAAAAGCAGGAGGAGGCTGTAAAGAAAAAGTATGGAGGAATGCTGCCCAAAAAGCCGCCACTCATATCTAAGGACCATGAGCGTGCTTACTTTGATTCTGCGGATTGGGCACTTGGAAAGCAAGGCGGAGACAAGCCTAAGGGGCCACTTGAAGCTCTTCGGCCTAAATTACAGCCGACGCAGCAGCAAACACGTTACCGGAAATCTCCATATGCTCCTTCAGGAGAAGAAGGGGGAAGTGTTCCAGCCGAGGATGTGCCTTCGAACGAGTAA
>Glyma.15g253200.2 sequence-type=CDS polypeptide=Glyma.15g253200.2.p locus=Glyma.15g253200 ID=Glyma.15g253200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTAACATAGAGGAGAACAAATATCTAGGACAGATGGACGTGAATGCATCTGATAAGTCAGCTAACATGCCATCATCCCAAAAGCAGGAGGAGGCTGTAAAGAAAAAGTATGGAGGAATGCTGCCCAAAAAGCCGCCACTCATATCTAAGGACCATGAGCGTGCTTACTTTGATTCTGCGGATTGGGCACTTGGAAAGCAAGGCGGAGACAAGCCTAAGGGGCCACTTGAAGCTCTTCGGCCTAAATTACAGCCGACGCAGCAGCAAACACGTTACCGGAAATCTCCATATGCTCCTTCAGGAGAAGAAGGGGGAAGTGTTCCAGCCGAGGATGTGCCTTCGAACGAGTAA
Predicted protein sequences of Glyma.15g253200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.15g253200.1.p sequence-type=predicted peptide transcript=Glyma.15g253200.1 locus=Glyma.15g253200 ID=Glyma.15g253200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSNIEENKYLGQMDVNASDKSANMPSSQKQEEAVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGGDKPKGPLEALRPKLQPTQQQTRYRKSPYAPSGEEGGSVPAEDVPSNE*
>Glyma.15g253200.2.p sequence-type=predicted peptide transcript=Glyma.15g253200.2 locus=Glyma.15g253200 ID=Glyma.15g253200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSNIEENKYLGQMDVNASDKSANMPSSQKQEEAVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGGDKPKGPLEALRPKLQPTQQQTRYRKSPYAPSGEEGGSVPAEDVPSNE*