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Report for Sequence Feature Glyma.15g250700

Feature Type:gene_model
Chromosome:Gm15
Start:47865575
stop:47866654
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g250700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13990.1AT exocyst subunit exo70 family protein C2 JGI N/AIEA
GO:0006887GO-bp exocytosis EnsemblGenomesN/AIEA
GO:0006887GO-bp exocytosis JGI N/AIEA
GO:0000145GO-cc exocyst EnsemblGenomesN/AIEA
GO:0000145GO-cc exocyst JGI N/AIEA
PTHR12542Panther EXOCYST COMPLEX PROTEIN EXO70 JGI N/AIEA
PTHR12542:SF7Panther EXOCYST COMPLEX COMPONENT 7 JGI N/AIEA
PF03081PFAM Exo70 exocyst complex subunit JGI N/AIEA

Expression Patterns of Glyma.15g250700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g250700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g40120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g250700
>Glyma.15g250700.1 sequence-type=CDS polypeptide=Glyma.15g250700.1.p locus=Glyma.15g250700 ID=Glyma.15g250700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTACTAATAGAAAGAAACCAATAAAATGTAGTTTGCATAACCTTTTCCTTTCCAGAACAAGATTATATGTTCTTTATGATTTCGAGAGATCAGGTGAGAACAATTATCGGAAGATAATACTTGACCACGGTTCAGAAAAGAAATCAAGGTCTCCATTTAAAATTAGTCTGAAAATTCCTGCTTCGATTTTTAAAGGCAATAGGAAAAGTTTAAGGCTAGCGTGTGAATACAAAGACACTTTAGAAGAGGTGTTCAAAGAACACTCCAAAATGGAGCGTGCAAATTCAACAAGCAGGCCACACTACGAAGATTCCAAACCAAACAACAACAACAAACAAAAAGAAAATGTGTCACCTTTTGCGGCGCAGTTAATGAGGGTAATGGAGCTTCTGGACACAAATCTTGAAGGAAAAGCGAAGCTGTACAAAGAAGTACCACTAAGCCTCATATTTATGATGAGCAACAGAAGGTACATAGTTCAGAAGATAAAAGGCTCTACAGAGATCTACGAAGTGATGGGAGAAACGTGGTGTCGCAAGAGATCCATGGACCTGAGAACTTACCACAAGAACTACCAGGTTGAAACGTGGAGCAAGATTCTGAGTTCTCTTAGCCCTAAAGGTTTGAACGAGAACAGGAAGGTGCACAAGTTAGTGCTGAAGAAGCGGTTCAAGAGCTTCAACCTGACATTTGACTTGGGTGGAACGGAGAAAGAGGGTTTGAAAAGCCAGGATTCTTCTTAG
Predicted protein sequences of Glyma.15g250700
>Glyma.15g250700.1.p sequence-type=predicted peptide transcript=Glyma.15g250700.1 locus=Glyma.15g250700 ID=Glyma.15g250700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLTNRKKPIKCSLHNLFLSRTRLYVLYDFERSGENNYRKIILDHGSEKKSRSPFKISLKIPASIFKGNRKSLRLACEYKDTLEEVFKEHSKMERANSTSRPHYEDSKPNNNNKQKENVSPFAAQLMRVMELLDTNLEGKAKLYKEVPLSLIFMMSNRRYIVQKIKGSTEIYEVMGETWCRKRSMDLRTYHKNYQVETWSKILSSLSPKGLNENRKVHKLVLKKRFKSFNLTFDLGGTEKEGLKSQDSS*






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