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Report for Sequence Feature Glyma.15g247000

Feature Type:gene_model
Chromosome:Gm15
Start:47054408
stop:47057547
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g247000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G26690.1AT emp24/gp25L/p24 family/GOLD family protein JGI N/AIEA
GO:0006810GO-bp transport EnsemblGenomesN/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
PTHR22811Panther TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PTHR22811:SF5Panther JGI N/AIEA
PF01105PFAM emp24/gp25L/p24 family/GOLD JGI N/AIEA

Expression Patterns of Glyma.15g247000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g247000 not represented in the dataset
Glyma.15g247000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g247000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g39573 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g247000
>Glyma.15g247000.1 sequence-type=CDS polypeptide=Glyma.15g247000.1.p locus=Glyma.15g247000 ID=Glyma.15g247000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCATATCCAATTTGTGGAACTATTGAATTTGAGTGGAGAACTGGGGTTGTTGCCAAAGATTGGTCAAAGGTTGCTAAGAAAGGGCAGATTCAGGTAATGGAATTTGAGTTGAAGAAGCTATATGATACTGTCCTATCCATCCATGACGAGATGTTTTATCTTCGAGAAAGGGAGGAAGAGATGAAAGATATTAACAAAGCAACAAACTGCAAGATGTTTACCTTCAGTATATGA
Predicted protein sequences of Glyma.15g247000
>Glyma.15g247000.1.p sequence-type=predicted peptide transcript=Glyma.15g247000.1 locus=Glyma.15g247000 ID=Glyma.15g247000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPYPICGTIEFEWRTGVVAKDWSKVAKKGQIQVMEFELKKLYDTVLSIHDEMFYLREREEEMKDINKATNCKMFTFSI*






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