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Report for Sequence Feature Glyma.15g244400

Feature Type:gene_model
Chromosome:Gm15
Start:46583957
stop:46585136
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g244400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G64670.1AT Ribosomal protein L18e/L15 superfamily protein JGI N/AIEA
GO:0006412GO-bp translation EnsemblGenomesN/AIEA
GO:0005762GO-cc mitochondrial large ribosomal subunit EnsemblGenomesN/AIEA
GO:0015934GO-cc large ribosomal subunit EnsemblGenomesN/AIEA
GO:0003735GO-mf structural constituent of ribosome EnsemblGenomesN/AIEA
PTHR12934Panther 50S RIBOSOMAL PROTEIN L15 JGI N/AIEA
PTHR12934:SF1Panther JGI N/AIEA

Expression Patterns of Glyma.15g244400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g244400 not represented in the dataset
Glyma.15g244400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g244400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g39184 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g244400
>Glyma.15g244400.1 sequence-type=CDS polypeptide=Glyma.15g244400.1.p locus=Glyma.15g244400 ID=Glyma.15g244400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGCGTGGTTCTGAGCAGATCAAGTGGCCAATTCATCTAGAGGTATCAAGGGTTACTGTTAGGGCTAAGGAAGCAGTTGAAGCAGCTGGTGGGTCTGTGAGAAGGGTGTATTACAATAAGTTGGGCTTGAAGGCACTGGTGAAGCCTGAGTGGTTTGAAAAGAAAGGAAGATTATTGCCTAGAGCAGCTAGACCTCCTCCTAAGCAAAAGGACAAAGTTGACAGCATTGGTCGGTTGCCTGCCCCAACGAAGCCAATTCCATTTTTAGTTGAAGCAAGCAAAGATCTTCCAGTTCAGCATCTTAGTTAA
Predicted protein sequences of Glyma.15g244400
>Glyma.15g244400.1.p sequence-type=predicted peptide transcript=Glyma.15g244400.1 locus=Glyma.15g244400 ID=Glyma.15g244400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGRGSEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGLKALVKPEWFEKKGRLLPRAARPPPKQKDKVDSIGRLPAPTKPIPFLVEASKDLPVQHLS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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