Glyma.15g219600

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Report for Sequence Feature Glyma.15g219600

Feature Type:	gene_model
Chromosome:	Gm15
Start:	38433708
stop:	38438520
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.15g219600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G18990.1	AT	thioredoxin domain-containing protein 9 homolog	JGI	N/A	IEA
GO:0008616	GO-bp	queuosine biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0045454	GO-bp	cell redox homeostasis	EnsemblGenomes	N/A	IEA
GO:0045454	GO-bp	cell redox homeostasis	JGI	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0008479	GO-mf	queuine tRNA-ribosyltransferase activity	EnsemblGenomes	N/A	IEA
PTHR21148	Panther	PHOSDUCIN-RELATED	JGI	N/A	IEA
PTHR21148:SF11	Panther	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9	JGI	N/A	IEA
PF00085	PFAM	Thioredoxin	JGI	N/A	IEA

Expression Patterns of Glyma.15g219600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g219600 not represented in the dataset	Glyma.15g219600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.15g219600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma15g32300	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.15g219600

Limit To All Plant Sequences

>Glyma.15g219600.2 sequence-type=transcript locus=Glyma.15g219600 ID=Glyma.15g219600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCAATATTTTCTTTTCTTATTTGTGTTTGAAGTGAAATGTGCGGCAAAACTTAGATCCTTGTGAATCAATTCAAACAATAGGAGAAGAAGGGACTAGCGACGAACTCAAACGGCGTCGTATCGACTCGTTGTTCATCCATTTGAGAGGTATTTGGTAGCGGAAGATGGATAAGGGTAAGATCCAAGAGGTGATCGAGAACCAAGTCCTGACGGTGGCGCAAGCCGTCGAGGACAAGATCGACGATGAGATCGCCGCCCTGGAACGCCTCGATGCCGACGACATCGAAGCCCTCCGCGAGCATCGCCTCCAGCAGATGAAGAAGATGGCGGAGAAGCGCTCCCGCTGGATCTCCCTCGGCCACTCCGAATATTCCGAGATTCCCTCCAAGAAAGACTTCTTCTCCGTCGTCAAGGCCAGCGAACGCGTCGTTTGCCACTTCTTCCGCGAAAACTGGCCCTGCAAGGTTATGGACAAACATTTAAATATTTTGGCAAAGCAGCATATCGAGACTCGGTTTGTGAAACTCAACGCTGAGAAGAGTCCTTTTCTCGCTGAGAAGCTCAAGATCATTGTTCTTCCAACCCTTGCCCTCTCGCTATCTGGATCTCTCTTTTTCTTCGGTAGATAGTAACTATTATCATGCTTTTAAATTACCTTTATATTACGGAAAAATAAATACGTCGTTTGTGACGACGTGGATGGAACCTGAATGTGACAAACTCATCATGGCTGCCATTAACAAAAATTACGTCGACATGGATGAGTGAGTACCCTGTCACCACTGAGCTCCAGGCAAGTATCACATATACCATACTTGATATTAATCAATTATTAATGTCGTTCAATTAAGGATGAGCGATAACATATACTATATTCGTAGGAGTATTAATTTTTAATTTAATGAATTTGTCCCATTCGATTTGGTAAATGTCTCTTTAATTAATGATTTACCCTGTCTTAACTCTAAATATTGTATGGTTTCATTAATAATAATTGAGAGACGTACGAGAGTTACATAGGGATAGTAGAGATTGTTTGGAAAAAATAAGCAACCAACATTGATAAAAAATAATCGTAGGAATAGTAAATCTTAATTCTACCTTACGTTCTCTTCCTCTCTAGCTATATATATATATTGTGGAGCTGTGGGCTGTTCACTTTAATACTATAGGCTACATGTCATGTTAGCTCATTAATTCGTTTGACTAATTAAGAGTCCTTTCTTTCAACTTTTATTTTATCTTCCTCCTTTTTCTTATAGGCTGCATGTCAGGTTGGGTCATTAATTCATTTGACTAATTCATGGTATATTTAGCTTGGTAAAAACAGGTGGAAAAAAAGTAAGACAAAGTAGAAAATGAAATGATTTTGTAGGTTTGATAAAAAAAAAATGAGATATAAAGTTTTAAATTTTATTTTCCCATTATTGTAAATGATACCAGAAAATGCAAGAGAAAGAAAGATCGGTTATTGTCCTTTCATCTCTTTCCATTCATTCTACTTTCATGTTTTCCAACATATCCGTAAGAATTCTCTCTCAAATTTTTCTTTTGAAAAATTACATTTAAAAATTTAAATGTATTTACTTAAACTGCAGGCAACCTTAGTAAATATTGCAACTTATGTGTTTGACTGTTCAAAACATATGGATATGGCTCTCATCTTGCATTGATTGTGTATAGTTCGACATTCAAGGTGGTTGTTTTCAGCAATGATAAAGCCGCTACGTTGGTTGATTTTTGGGAATATCCCCATTTCCTTGAAATAAAACTTTGTTGTTATGGATCTGTGATTTGAGTAAAGAGTGGGATGAGACATCATATCTTCCAATTGCTGCATGCACGTTGATTAACTTAATGACCTCTTACTATTATGCACCttgttattacattattaatttatttttttatttgattatgcaatattttaatgaagttagatcattggaagcagagagattcaaggcgtttcgcatccaatggacacagtattatctaaaagttagaaatcaaacataggatgttagcatcttaagggtcaaagcaaactgagcaagagacatgtcaggtgggtggagtttcttgaataattccaatatgtcatcaagtacaagaaaggtaagtccgatgtagttgctgatgcactttcaagaaggttctaaaaaatggcacatttcataccatgtaagaaaaatgatgatgcgtgtcacgttgctgatttatttttcaaggaagtggtgtgtctccacggactatcaagaagcattgtatcaaactgagacaccaagttccttagtcacttttggagaacattgtgggggtaaggttggaacaaagcttctcttttccaccacatgtcatcctcaaactgatggctaaactgagcataaggatgcacatgctaaagttgagtatataaaaagattgcatgagcaagcgaagactcaaattgcaaagaagaatgaaagctatgtcaagcaaaccaacaagaacaggaagaaagtggtacttgaaccaagtgattgggtttgggtacacatgaggaaggagaggttccctaaacaaaggatgtccaaacttcaacctagaggagatggacctttccaagtactagagaggataaattacaatgcttacaagatcgatattccaggtgaatatgaaggaaccatgaccaggagtaagaccaaacagtcagaggatagcctccaacaaatggtatcaactatacttaacaaggtccaagtggagaaagatgaaggctcagaggcactaccaagaatcttgattgttgctgaaggcccatgcaaaatatttttttctatttctttttttttgttgtcattttggcccaaactaatttgaaggcccatgtcatctttttctatttttcgttttaattttaaattaaataaaattggtgcctctccaactgcacctcagatatattatatgtattgaactcgttttcaatagagagacttttgatattttgcaa

Coding sequences of Glyma.15g219600

Limit To All Plant Sequences

>Glyma.15g219600.1 sequence-type=CDS polypeptide=Glyma.15g219600.1.p locus=Glyma.15g219600 ID=Glyma.15g219600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATAAGGGTAAGATCCAAGAGGTGATCGAGAACCAAGTCCTGACGGTGGCGCAAGCCGTCGAGGACAAGATCGACGATGAGATCGCCGCCCTGGAACGCCTCGATGCCGACGACATCGAAGCCCTCCGCGAGCATCGCCTCCAGCAGATGAAGAAGATGGCGGAGAAGCGCTCCCGCTGGATCTCCCTCGGCCACTCCGAATATTCCGAGATTCCCTCCAAGAAAGACTTCTTCTCCGTCGTCAAGGCCAGCGAACGCGTCGTTTGCCACTTCTTCCGCGAAAACTGGCCCTGCAAGGTTATGGACAAACATTTAAATATTTTGGCAAAGCAGCATATCGAGACTCGGTTTGTGAAACTCAACGCTGAGAAGAGTCCTTTTCTCGCTGAGAAGCTCAAGATCATTGTTCTTCCAACCCTTGCCCTCTCGCTATCTGGATCTCTCTTTTTCTTCGGTAGATAG

>Glyma.15g219600.2 sequence-type=CDS polypeptide=Glyma.15g219600.2.p locus=Glyma.15g219600 ID=Glyma.15g219600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATAAGGGTAAGATCCAAGAGGTGATCGAGAACCAAGTCCTGACGGTGGCGCAAGCCGTCGAGGACAAGATCGACGATGAGATCGCCGCCCTGGAACGCCTCGATGCCGACGACATCGAAGCCCTCCGCGAGCATCGCCTCCAGCAGATGAAGAAGATGGCGGAGAAGCGCTCCCGCTGGATCTCCCTCGGCCACTCCGAATATTCCGAGATTCCCTCCAAGAAAGACTTCTTCTCCGTCGTCAAGGCCAGCGAACGCGTCGTTTGCCACTTCTTCCGCGAAAACTGGCCCTGCAAGGTTATGGACAAACATTTAAATATTTTGGCAAAGCAGCATATCGAGACTCGGTTTGTGAAACTCAACGCTGAGAAGAGTCCTTTTCTCGCTGAGAAGCTCAAGATCATTGTTCTTCCAACCCTTGCCCTCTCGCTATCTGGATCTCTCTTTTTCTTCGGTAGATAG

Predicted protein sequences of Glyma.15g219600

Limit To All Plant Sequences

>Glyma.15g219600.1.p sequence-type=predicted peptide transcript=Glyma.15g219600.1 locus=Glyma.15g219600 ID=Glyma.15g219600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDKGKIQEVIENQVLTVAQAVEDKIDDEIAALERLDADDIEALREHRLQQMKKMAEKRSRWISLGHSEYSEIPSKKDFFSVVKASERVVCHFFRENWPCKVMDKHLNILAKQHIETRFVKLNAEKSPFLAEKLKIIVLPTLALSLSGSLFFFGR*

>Glyma.15g219600.2.p sequence-type=predicted peptide transcript=Glyma.15g219600.2 locus=Glyma.15g219600 ID=Glyma.15g219600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDKGKIQEVIENQVLTVAQAVEDKIDDEIAALERLDADDIEALREHRLQQMKKMAEKRSRWISLGHSEYSEIPSKKDFFSVVKASERVVCHFFRENWPCKVMDKHLNILAKQHIETRFVKLNAEKSPFLAEKLKIIVLPTLALSLSGSLFFFGR*

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