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Report for Sequence Feature Glyma.15g189600

Feature Type:gene_model
Chromosome:Gm15
Start:20116079
stop:20116898
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g189600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G56610.1AT Phosphotyrosine protein phosphatases superfamily protein JGI N/AIEA
GO:0016311GO-bp dephosphorylation EnsemblGenomesN/AIEA
GO:0004439GO-mf phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity EnsemblGenomesN/AIEA
PTHR10159Panther DUAL SPECIFICITY PROTEIN PHOSPHATASE JGI N/AIEA
PTHR10159:SF5Panther MAP KINASE PHOSPHATASE-1 JGI N/AIEA
PHOSLIPSYN2-PWYSoyCyc9 superpathway of phospholipid biosynthesis II (plants) Plant Metabolic Network ISS
PWY-5269SoyCyc9 cardiolipin biosynthesis II Plant Metabolic Network ISS
PWY4FS-7SoyCyc9 phosphatidylglycerol biosynthesis I (plastidic) Plant Metabolic Network ISS
PWY4FS-8SoyCyc9 phosphatidylglycerol biosynthesis II (non-plastidic) Plant Metabolic Network ISS
GN7V-64614SoyCyc9-rxn phosphatidylglycerophosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.15g189600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g189600 not represented in the dataset
Glyma.15g189600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g189600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g21805 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g189600
>Glyma.15g189600.1 sequence-type=CDS polypeptide=Glyma.15g189600.1.p locus=Glyma.15g189600 ID=Glyma.15g189600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGATTGAGGAATTGGATGATGGAGAGTGTAGTAGGGACGAGGAAGAGAAGTGTCAGAGGCAGATTGTGAGCATTGATGCAAAGAGAGCGTTGGTTGGAGCAGGTGCTTGGATCTTGTTCTACCCCACACTCTTGTATAATGTGCTTCGTAACCAGATTGAAGTTGAGTTTAGGTGGTGGGATCATATTGACGAGTTTTTGTTACTGGGCACTGTTCCATTCCCCAAAGATGTTCCTCACTTGAATAAGGTTGGTGTGGGTGGTGTGATTACTCTCAATGAGCCCTACGAAACCTTGGTGCAGTTGTATCAGGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTATGCCCCCTCCTTCGTGGATATCAATCGAGCTGTGCATACTTATGTTTTTCCATACTTATGTTTTTCAGGTTGA
Predicted protein sequences of Glyma.15g189600
>Glyma.15g189600.1.p sequence-type=predicted peptide transcript=Glyma.15g189600.1 locus=Glyma.15g189600 ID=Glyma.15g189600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKIEELDDGECSRDEEEKCQRQIVSIDAKRALVGAGAWILFYPTLLYNVLRNQIEVEFRWWDHIDEFLLLGTVPFPKDVPHLNKVGVGGVITLNEPYETLVQLYQAHGIDHLVIPTRDYLYAPSFVDINRAVHTYVFPYLCFSG*






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