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Report for Sequence Feature Glyma.15g187000

Feature Type:gene_model
Chromosome:Gm15
Start:19434930
stop:19446957
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g187000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G48960.1AT HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase JGI N/AIEA
GO:0016311GO-bp dephosphorylation EnsemblGenomesN/AIEA
GO:0008253GO-mf 5'-nucleotidase activity EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG2469 KOG IMP-GMP specific 5'-nucleotidase JGI N/AIEA
PTHR12103Panther CYTOSOLIC PURINE 5-NUCLEOTIDASE-RELATED JGI N/AIEA
PTHR12103:SF1Panther JGI N/AIEA
PF05761PFAM 5' nucleotidase family JGI N/AIEA
P165-PWYSoyCyc9 superpathway of purines degradation in plants Plant Metabolic Network ISS
PWY-5044SoyCyc9 purine nucleotides degradation I (plants) Plant Metabolic Network ISS
PWY-5695SoyCyc9 inosine 5'-phosphate degradation Plant Metabolic Network ISS
PWY-6595SoyCyc9 superpathway of guanosine nucleotides degradation (plants) Plant Metabolic Network ISS
PWY-6596SoyCyc9 adenosine nucleotides degradation I Plant Metabolic Network ISS
PWY-6606SoyCyc9 guanosine nucleotides degradation II Plant Metabolic Network ISS
PWY-6607SoyCyc9 guanosine nucleotides degradation I Plant Metabolic Network ISS
PWY-7185SoyCyc9 UTP and CTP dephosphorylation I Plant Metabolic Network ISS
PWYQT-4445SoyCyc9 pyrimidine salvage pathway Plant Metabolic Network ISS
URSIN-PWYSoyCyc9 ureide biosynthesis Plant Metabolic Network ISS
GN7V-43626SoyCyc9-rxn 5'-nucleotidase Plant Metabolic Network ISS

Expression Patterns of Glyma.15g187000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g187000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g21240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g187000
>Glyma.15g187000.1 sequence-type=CDS polypeptide=Glyma.15g187000.1.p locus=Glyma.15g187000 ID=Glyma.15g187000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTTTAAGAGGAATTGATGTACATGCTGCATTTGAAGGTCCAGTTGAGGAGGCCAGAACAGAGGCTAGAAAAGCTGAAGATTTACTGAAAAAATTGGATATTCCGAGTCCTTCGTTGAGAAATTCACCTCGTGGAATATTCTGCACCCGAACGCTGAATCTAAGGTCAATTAGTGCTATTGGATATGACATGGACTATACCTTGGTGCATTATAATGTGAAGGCTTGGGAAGGGCGTGCTTATGACTACTGTATGGAAAACCTCAAGAATATGGGTTTCCCTATTGATGGACTTGCGTTTGATCCAGACCTGGTTATCAGAGGTCTTGTGATAGATAAAGAGGGAGGCAATTTGGTTAAAGCTGATCGATTTGGTTATATAAAAAGAGCCATGCATGGAACCAAAATGCTATCTACGCGTGCTGTGAGTGAGATCTATGGGAGAGAACTGGTGGACCTGCGGCAAAAGAGTCGATGGGAGTTTCTCAACACATTCTTCTCTGTGTCCGAAGCTGTGGCTTACATGCAGATGGTTGACAAACTTGATGGTGGGATTATACCATCCAATCTTGGCTCCTTTGATTATAAAGGGCTTTATAAGGTTGTTGGAAAAGCTCTCATCGCGGCACACGTAGAAGGCCGCCTCAAGAGTGAGATTATGTCTAACCCTGAACAGTTTGTGGAGCCTGATCCGGAATTACTCTTCACACTTTTGGATCAGAAAGAGGCAGGCAAAAAACTTGTACTTATTACCAACTCAGATTATCATTATACACACAAAATGATGCATCATTCATTCAATAGATTCCTTCCCAATGACATGGGTTGGAGAGATTTATTTGACATTGTAATTGTCTCGGCAAACAAACCAGAATTCTTCCAAATGTCACACCCCATGTATGAGGTGGTGACAGAAGAGGGCCTGATGCGTCCATGCTTTAAGGCTCAAACTGGTGGTTTGTACTCAGGGGGGAGTGCGCAGATGGTTGAAAGTTCCCTAAATATACATGGAGATGAGATACTGTATATTGGAGACCATATTTACACTGATGTTAGTCAACCCAAAGTCCATTTGCGATGGCGAGCAGCATTGATTTGTCGGGAACTGGAAGAAGAATACACTGCCCTAATTCGTAGCCGGGGTCGTAGACAATCATTGGTAGAGCTTATCAATCAAAAGGAGGTTGTTGTTGATCTCTTTAACCAACTGCGGCTGGCTCTGCAGAGGCAAAGTAAAGGGCGTCCAGCCCAAATTGTTGCTGCAACTAATGTGAACAAAGAAAATCTTACTGAACGCATGCAAAAGTTACTTCTTGTTATGCAAATACTAGATGGAAAAATTGCTCCAATGCTAGAGGCAGATGGGGAGCTCTTTAATAAAAAGTGGGGCTATCTATCGCGTGCTGGTTTGTGGGATAAAAGCCACTTGATGCGACAAATTGAGAAGTATGCAGATATATATACCTCTAGAGTGTCAAATTTTTTATATTACACACCGTTTATGTATTTTGGCTCTCAGGAACAGAACCTTGCACATGATTCATACACACACTATTGTTCTCAAATTGACAATTTTCCTTCCTATGGACAATTGGACCAACATGGTGGAGAAATACAAGAAACAAATGTATCTTGTTGA
Predicted protein sequences of Glyma.15g187000
>Glyma.15g187000.1.p sequence-type=predicted peptide transcript=Glyma.15g187000.1 locus=Glyma.15g187000 ID=Glyma.15g187000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALRGIDVHAAFEGPVEEARTEARKAEDLLKKLDIPSPSLRNSPRGIFCTRTLNLRSISAIGYDMDYTLVHYNVKAWEGRAYDYCMENLKNMGFPIDGLAFDPDLVIRGLVIDKEGGNLVKADRFGYIKRAMHGTKMLSTRAVSEIYGRELVDLRQKSRWEFLNTFFSVSEAVAYMQMVDKLDGGIIPSNLGSFDYKGLYKVVGKALIAAHVEGRLKSEIMSNPEQFVEPDPELLFTLLDQKEAGKKLVLITNSDYHYTHKMMHHSFNRFLPNDMGWRDLFDIVIVSANKPEFFQMSHPMYEVVTEEGLMRPCFKAQTGGLYSGGSAQMVESSLNIHGDEILYIGDHIYTDVSQPKVHLRWRAALICRELEEEYTALIRSRGRRQSLVELINQKEVVVDLFNQLRLALQRQSKGRPAQIVAATNVNKENLTERMQKLLLVMQILDGKIAPMLEADGELFNKKWGYLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFGSQEQNLAHDSYTHYCSQIDNFPSYGQLDQHGGEIQETNVSC*






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