Glyma.15g171900

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Report for Sequence Feature Glyma.15g171900

Feature Type:	gene_model
Chromosome:	Gm15
Start:	15674317
stop:	15676339
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.15g171900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G57020.1	AT	myristoyl-CoA:protein N-myristoyltransferase	JGI	N/A	IEA
GO:0006499	GO-bp	N-terminal protein myristoylation	EnsemblGenomes	N/A	IEA
GO:0018008	GO-bp	N-terminal peptidyl-glycine N-myristoylation	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0004379	GO-mf	glycylpeptide N-tetradecanoyltransferase activity	EnsemblGenomes	N/A	IEA
GO:0004379	GO-mf	glycylpeptide N-tetradecanoyltransferase activity	JGI	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
GO:0016746	GO-mf	transferase activity, transferring acyl groups	EnsemblGenomes	N/A	IEA
KOG2779	KOG	N-myristoyl transferase	JGI	N/A	IEA
PTHR11377	Panther	N-MYRISTOYL TRANSFERASE	JGI	N/A	IEA
PF01233	PFAM	Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain	JGI	N/A	IEA
PF02799	PFAM	Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain	JGI	N/A	IEA

Expression Patterns of Glyma.15g171900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g171900 not represented in the dataset	Glyma.15g171900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.15g171900

Paralog	Evidence	Comments
Glyma.09g065700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15g171900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma15g18770	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.15g171900

Limit To All Plant Sequences

>Glyma.15g171900.2 sequence-type=transcript locus=Glyma.15g171900 ID=Glyma.15g171900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCCCAAGAATGAGTCATTGGTTAACCCGTCGCGAGGGAGAAGTAGCCGATAATAAAAACACTCGTGCCGCACCTTCGTCTTCCCCAATGCTTCTTTCCACACGCATCTCGGAATCCCCTTTCTTCATCGCATAGATACTTTCGCTAGCCCACCAAGTAACCCTTATTCCAATTCACCCTCGCCACTCCTTAGATCGAAATCATTTTTTTTCGCCCGGCACATGGATCGAGATCCTCTCTTGTTTCTCTGTTTCAATTTGGATTCGAATTTGAATTTCAGTTAATCTCGTTTTCACTGCCAGGTGTTCAATCTGGGTCTCCAAATGCAAAACCAGATCTTGTTGACGGAGACTCGGCGGTTTCCAATAACGCGACATTGGAAACCATTGTTCAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACTCAGCCTGTGGGGCAATACAAGGATGTTGGGGACTCCAGTTTGCCCGAGGGCCCGATTGAGCCCCCAACTCCTTTATCTGAGGTCAAGCAGGAGCCTTACAACCTTCCTAATGCTTATGAGTGGACAACATGTGACATGGACTCTGAGGAAATCTGTGATGAAGTTTATGTCCTGCTCAAGAATAACTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAATTTCTAAGTTGGGCTTTGCGGGTTCCTGGCTATTACCAGAGTTGGCACATTGGCGTGAGAGCCAAGACATCGAAGAAGTTGGTTGCTTTCATCAGTGGCATCCCCGCCAGGATCAGGGTTAATGAGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCAAAGAGACTTGCGCCTGTTATGATCAAGGAAGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACGGCAGGAGTTGTTCTTCCAACGCCGATCACAACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTAATTGATGTTGGATTTTCAAGGCTTGGGGCTAGGATGACGATGAGCCGCACTATAAAACTTTACAAATTGCCTGATTCAACGGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTCCCTGCTGTTACTCGGCTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAACATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTCCCTTCTTCCATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACTCCACTGACTCAGTTGATGAATGATGTGCTGATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCATTGGATGTAATGCACAATGAGAGTTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTCCATTACTACTTGTACAATTATAGGATTCGTAGTGCCTTGAAACCATCTGGACTTGGACTTGTGCTCTTGTAGTTTGATACTATTCAGTTTTGGTTTCAGTATGTAATTGGAAAAAACATTCATTTGTTTTGTCTATTAGCTTGTTGTTTCAACATTGTTTTGTGTTCCTTTCAAATATTGCCAATTAACATATTAGGTTTTCAGGGTATGTGAGAGCCCATCTTATGGCAGACTTTCTGCTAATGTGCTTATACTGCAAAATTCTGAAGTTGTTATGGTCTGCTACTTCAGTTTCCTTTTTGCTCTATTTCCTTCTG

>Glyma.15g171900.3 sequence-type=transcript locus=Glyma.15g171900 ID=Glyma.15g171900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTGGTTAACCCGTCGCGAGGGAGAAGTAGCCGATAATAAAAACACTCGTGCCGCACCTTCGTCTTCCCCAATGCTTCTTTCCACACGCATCTCGGAATCCCCTTTCTTCATCGCATAGATACTTTCGCTAGCCCACCAAGTAACCCTTATTCCAATTCACCCTCGCCACTCCTTAGATCGAAATCATTTTTTTTCGCCCGGCACAAGTTGGGTTTTTTTTTATATAACTGATAATGGGTGATAGCAGTGTTCAATCTGGGTCTCCAAATGCAAAACCAGATCTTGTTGACGGAGACTCGGCGGTTTCCAATAACGCGACATTGGAAACCATTGTTCAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACTCAGCCTGTGGGGCAATACAAGGATGTTGGGGACTCCAGTTTGCCCGAGGGCCCGATTGAGCCCCCAACTCCTTTATCTGAGGTCAAGCAGGAGCCTTACAACCTTCCTAATGCTTATGAGTGGACAACATGTGACATGGACTCTGAGGAAATCTGTGATGAAGTTTATGTCCTGCTCAAGAATAACTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAATTTCTAAGTTGGGCTTTGCGGGTTCCTGGCTATTACCAGAGTTGGCACATTGGCGTGAGAGCCAAGACATCGAAGAAGTTGGTTGCTTTCATCAGTGGCATCCCCGCCAGGATCAGGGTTAATGAGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCAAAGAGACTTGCGCCTGTTATGATCAAGGAAGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACGGCAGGAGTTGTTCTTCCAACGCCGATCACAACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTAATTGATGTTGGATTTTCAAGGCTTGGGGCTAGGATGACGATGAGCCGCACTATAAAACTTTACAAATTGCCTGATTCAACGGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTCCCTGCTGTTACTCGGCTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAACATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTCCCTTCTTCCATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACTCCACTGACTCAGTTGATGAATGATGTGCTGATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCATTGGATGTAATGCACAATGAGAGTTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTCCATTACTACTTGTACAATTATAGGATTCGTAGTGCCTTGAAACCATCTGGACTTGGACTTGTGCTCTTGTAGTTTGATACTATTCAGTTTTGGTTTCAGTATGTAATTGGAAAAAACATTCATTTGTTTTGTCTATTAGCTTGTTGTTTCAACATTGTTTTGTGTTCCTTTCAAATATTGCCAATTAACATATTAGGTTTTCAGGGTATGTGAGAGCCCATCTTATGGCAGACTTTCTGCTAATGTGCTTATACTGCAAAATTCTGAAGTTGTTATGGTCTGCTACTTCAGTTTCCTTTTTGCTCTATTTCCTTCTG

Coding sequences of Glyma.15g171900

Limit To All Plant Sequences

>Glyma.15g171900.1 sequence-type=CDS polypeptide=Glyma.15g171900.1.p locus=Glyma.15g171900 ID=Glyma.15g171900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGATAGCAGTGTTCAATCTGGGTCTCCAAATGCAAAACCAGATCTTGTTGACGGAGACTCGGCGGTTTCCAATAACGCGACATTGGAAACCATTGTTCAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACTCAGCCTGTGGGGCAATACAAGGATGTTGGGGACTCCAGTTTGCCCGAGGGCCCGATTGAGCCCCCAACTCCTTTATCTGAGGTCAAGCAGGAGCCTTACAACCTTCCTAATGCTTATGAGTGGACAACATGTGACATGGACTCTGAGGAAATCTGTGATGAAGTTTATGTCCTGCTCAAGAATAACTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAATTTCTAAGTTGGGCTTTGCGGGTTCCTGGCTATTACCAGAGTTGGCACATTGGCGTGAGAGCCAAGACATCGAAGAAGTTGGTTGCTTTCATCAGTGGCATCCCCGCCAGGATCAGGGTTAATGAGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCAAAGAGACTTGCGCCTGTTATGATCAAGGAAGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACGGCAGGAGTTGTTCTTCCAACGCCGATCACAACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTAATTGATGTTGGATTTTCAAGGCTTGGGGCTAGGATGACGATGAGCCGCACTATAAAACTTTACAAATTGCCTGATTCAACGGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTCCCTGCTGTTACTCGGCTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAACATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTCCCTTCTTCCATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACTCCACTGACTCAGTTGATGAATGATGTGCTGATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCATTGGATGTAATGCACAATGAGAGTTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTCCATTACTACTTGTACAATTATAGGATTCGTAGTGCCTTGAAACCATCTGGACTTGGACTTGTGCTCTTGTAG

>Glyma.15g171900.2 sequence-type=CDS polypeptide=Glyma.15g171900.2.p locus=Glyma.15g171900 ID=Glyma.15g171900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACTCAGCCTGTGGGGCAATACAAGGATGTTGGGGACTCCAGTTTGCCCGAGGGCCCGATTGAGCCCCCAACTCCTTTATCTGAGGTCAAGCAGGAGCCTTACAACCTTCCTAATGCTTATGAGTGGACAACATGTGACATGGACTCTGAGGAAATCTGTGATGAAGTTTATGTCCTGCTCAAGAATAACTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAATTTCTAAGTTGGGCTTTGCGGGTTCCTGGCTATTACCAGAGTTGGCACATTGGCGTGAGAGCCAAGACATCGAAGAAGTTGGTTGCTTTCATCAGTGGCATCCCCGCCAGGATCAGGGTTAATGAGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCAAAGAGACTTGCGCCTGTTATGATCAAGGAAGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACGGCAGGAGTTGTTCTTCCAACGCCGATCACAACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTAATTGATGTTGGATTTTCAAGGCTTGGGGCTAGGATGACGATGAGCCGCACTATAAAACTTTACAAATTGCCTGATTCAACGGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTCCCTGCTGTTACTCGGCTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAACATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTCCCTTCTTCCATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACTCCACTGACTCAGTTGATGAATGATGTGCTGATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCATTGGATGTAATGCACAATGAGAGTTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTCCATTACTACTTGTACAATTATAGGATTCGTAGTGCCTTGAAACCATCTGGACTTGGACTTGTGCTCTTGTAG

>Glyma.15g171900.3 sequence-type=CDS polypeptide=Glyma.15g171900.3.p locus=Glyma.15g171900 ID=Glyma.15g171900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGATAGCAGTGTTCAATCTGGGTCTCCAAATGCAAAACCAGATCTTGTTGACGGAGACTCGGCGGTTTCCAATAACGCGACATTGGAAACCATTGTTCAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACTCAGCCTGTGGGGCAATACAAGGATGTTGGGGACTCCAGTTTGCCCGAGGGCCCGATTGAGCCCCCAACTCCTTTATCTGAGGTCAAGCAGGAGCCTTACAACCTTCCTAATGCTTATGAGTGGACAACATGTGACATGGACTCTGAGGAAATCTGTGATGAAGTTTATGTCCTGCTCAAGAATAACTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAATTTCTAAGTTGGGCTTTGCGGGTTCCTGGCTATTACCAGAGTTGGCACATTGGCGTGAGAGCCAAGACATCGAAGAAGTTGGTTGCTTTCATCAGTGGCATCCCCGCCAGGATCAGGGTTAATGAGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCAAAGAGACTTGCGCCTGTTATGATCAAGGAAGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACGGCAGGAGTTGTTCTTCCAACGCCGATCACAACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTAATTGATGTTGGATTTTCAAGGCTTGGGGCTAGGATGACGATGAGCCGCACTATAAAACTTTACAAATTGCCTGATTCAACGGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTCCCTGCTGTTACTCGGCTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAACATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTCCCTTCTTCCATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACTCCACTGACTCAGTTGATGAATGATGTGCTGATTGTAGCAAAGCAAAAGGATTTTGATGTTTTCAATGCATTGGATGTAATGCACAATGAGAGTTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTCCATTACTACTTGTACAATTATAGGATTCGTAGTGCCTTGAAACCATCTGGACTTGGACTTGTGCTCTTGTAG

Predicted protein sequences of Glyma.15g171900

Limit To All Plant Sequences

>Glyma.15g171900.1.p sequence-type=predicted peptide transcript=Glyma.15g171900.1 locus=Glyma.15g171900 ID=Glyma.15g171900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGDSSVQSGSPNAKPDLVDGDSAVSNNATLETIVQSFQDSMSLGKRHKFWETQPVGQYKDVGDSSLPEGPIEPPTPLSEVKQEPYNLPNAYEWTTCDMDSEEICDEVYVLLKNNYVEDDENMFRFNYSKEFLSWALRVPGYYQSWHIGVRAKTSKKLVAFISGIPARIRVNEEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTPGFRKMELRDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPNENVVDSFLVESPENHEITDFCSFYTLPSSILGNQNYSILKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRIRSALKPSGLGLVLL*

>Glyma.15g171900.2.p sequence-type=predicted peptide transcript=Glyma.15g171900.2 locus=Glyma.15g171900 ID=Glyma.15g171900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSLGKRHKFWETQPVGQYKDVGDSSLPEGPIEPPTPLSEVKQEPYNLPNAYEWTTCDMDSEEICDEVYVLLKNNYVEDDENMFRFNYSKEFLSWALRVPGYYQSWHIGVRAKTSKKLVAFISGIPARIRVNEEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTPGFRKMELRDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPNENVVDSFLVESPENHEITDFCSFYTLPSSILGNQNYSILKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRIRSALKPSGLGLVLL*

>Glyma.15g171900.3.p sequence-type=predicted peptide transcript=Glyma.15g171900.3 locus=Glyma.15g171900 ID=Glyma.15g171900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGDSSVQSGSPNAKPDLVDGDSAVSNNATLETIVQSFQDSMSLGKRHKFWETQPVGQYKDVGDSSLPEGPIEPPTPLSEVKQEPYNLPNAYEWTTCDMDSEEICDEVYVLLKNNYVEDDENMFRFNYSKEFLSWALRVPGYYQSWHIGVRAKTSKKLVAFISGIPARIRVNEEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTPGFRKMELRDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPNENVVDSFLVESPENHEITDFCSFYTLPSSILGNQNYSILKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRIRSALKPSGLGLVLL*

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