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Report for Sequence Feature Glyma.15g149900

Feature Type:gene_model
Chromosome:Gm15
Start:12376028
stop:12378637
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g149900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G47800.1AT multidrug resistance-associated protein 4 JGI N/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0000325GO-cc plant-type vacuole EnsemblGenomesN/AIEA
GO:0005774GO-cc vacuolar membrane EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016887GO-mf ATPase activity EnsemblGenomesN/AIEA
GO:0016887GO-mf ATPase activity JGI N/AIEA
GO:0042626GO-mf ATPase activity, coupled to transmembrane movement of substances EnsemblGenomesN/AIEA
PTHR24223Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24223:SF201Panther ABC TRANSPORTER C FAMILY MEMBER 14-RELATED JGI N/AIEA

Expression Patterns of Glyma.15g149900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g149900 not represented in the dataset
Glyma.15g149900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g149900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g16041 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g149900
>Glyma.15g149900.1 sequence-type=CDS polypeptide=Glyma.15g149900.1.p locus=Glyma.15g149900 ID=Glyma.15g149900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGTTTGTGGAAAAGATACAACAGCTCACAAATATTCCATCTGAACCAACATGGAATATCAGGCATCATCTTCCTCCTTCAAATTGGCCAGTTGAAGGCAATGTAGATATCAAAGACTTGCAGGTTAGATATCATCTAAACACTCCTCTGGTTCTTAAAGGCATTAGCATTAGTGGAGGTGAAAAGGTTGGTGTTGTTGGTCGAACTGGGAGCGAAAAGTCAACTTTAATTCAAGTATTCTTTAGGCTGGTGGAACCTTCAAGAGGGAAAATAACAATTGATGACCTTGTGGGAGCTACGAGAACCCAAGGGAATGGGGACATGAAAAAAAAATCCCCCATGATGGGATTTGGGAACACGAAGGGATGA
Predicted protein sequences of Glyma.15g149900
>Glyma.15g149900.1.p sequence-type=predicted peptide transcript=Glyma.15g149900.1 locus=Glyma.15g149900 ID=Glyma.15g149900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVFVEKIQQLTNIPSEPTWNIRHHLPPSNWPVEGNVDIKDLQVRYHLNTPLVLKGISISGGEKVGVVGRTGSEKSTLIQVFFRLVEPSRGKITIDDLVGATRTQGNGDMKKKSPMMGFGNTKG*






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