Report for Sequence Feature Glyma.15g148200
Feature Type: gene_model
Chromosome: Gm15
Start: 12189394
stop: 12197241
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.15g148200
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G06930.1 AT
protein arginine methyltransferase 4B
JGI N/A IEA
GO:0006355 GO-bp
regulation of transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0006479 GO-bp
protein methylation
EnsemblGenomes N/A IEA
GO:0006479 GO-bp
protein methylation
JGI N/A IEA
GO:0019919 GO-bp
peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
EnsemblGenomes N/A IEA
GO:0032259 GO-bp
methylation
EnsemblGenomes N/A IEA
GO:0034969 GO-bp
histone arginine methylation
EnsemblGenomes N/A IEA
GO:0005737 GO-cc
cytoplasm
JGI N/A IEA
GO:0005829 GO-cc
cytosol
EnsemblGenomes N/A IEA
GO:0008168 GO-mf
methyltransferase activity
EnsemblGenomes N/A IEA
GO:0008168 GO-mf
methyltransferase activity
JGI N/A IEA
GO:0008276 GO-mf
protein methyltransferase activity
JGI N/A IEA
GO:0008469 GO-mf
histone-arginine N-methyltransferase activity
EnsemblGenomes N/A IEA
GO:0016740 GO-mf
transferase activity
EnsemblGenomes N/A IEA
GO:0035242 GO-mf
protein-arginine omega-N asymmetric methyltransferase activity
EnsemblGenomes N/A IEA
KOG1500
KOG
Protein arginine N-methyltransferase CARM1
JGI N/A IEA
PTHR11006 Panther
PROTEIN ARGININE N-METHYLTRANSFERASE
JGI N/A IEA
PTHR11006:SF10 Panther
HISTONE-ARGININE METHYLTRANSFERASE CARMER-RELATED
JGI N/A IEA
PF05185 PFAM
PRMT5 arginine-N-methyltransferase
JGI N/A IEA
Expression Patterns of Glyma.15g148200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.15g148200
Paralog Evidence Comments
Glyma.09g044700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.15g148200 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma15g15830 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.15g148200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.15g148200.1 sequence-type=CDS polypeptide=Glyma.15g148200.1.p locus=Glyma.15g148200 ID=Glyma.15g148200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGGAGGGAGGAGCGATAATGGAGGATTCGGCGGCGCAGAAGAGGAAGCAGCAAGAGTTTGCTCTAGCGTCGGTTTCCGAGGTGTCTTCGGCTCCTTCTTCTGCTTCGCCGGGGGTTGCTCTCTTTGCTGGTGACCGTCTTCAAATTAGGAACGAATCTCACCGTGTTGCTCTCAATGCACACCTTTCAGATATTCAGCTATTCAGATTAGGTCCTATTGAATCGGTTTGCATGGTGGAAGGGTCTGAGGCTGACAAACAGACATCGTATTCCAGTGGAGTCGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGGATTCGATGTTCAAGGAGGAAACTTACCTAATGGAACTGATGTAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTACGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTCTTGAGAATCGTGCAGATTTCGTAGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGCGGCATTTTGTCACTATTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCCGTGGAAGCATCTGAAATGGCAGAATATGCACGAAAACTTGTAGCTGGGAACCCAATACTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCTGATATTCTAATCTCTGAGCCCATGGGCACCTTGTTAGTTAACGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCATCCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACGCCCTTACATGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTCCATGTGTTAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTCAGATTCACAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCACGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTCTCGCAGCCAATATATGTCATGGCAGGACAAGAAATTACTGGCAGGATGCACTTGATTGCTCACACTGCTCAGAGTTATACGATCTTTTTAACATTGTCAGCTAAAACGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCACAAGCTTATCCATTAACCCAAGATCAGCAACCTCAACCGTTTTTACAGACACAGGATATAGACATCCAATCTCAAGATTTGGATGAAGTGGAGATAATGCAACAGCCTTCGCCTAAGTCGTGTGCTCAGATTGACTCCCTCATGCAGAATGCATCATAA
Predicted protein sequences of Glyma.15g148200
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.15g148200.1.p sequence-type=predicted peptide transcript=Glyma.15g148200.1 locus=Glyma.15g148200 ID=Glyma.15g148200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLEGGAIMEDSAAQKRKQQEFALASVSEVSSAPSSASPGVALFAGDRLQIRNESHRVALNAHLSDIQLFRLGPIESVCMVEGSEADKQTSYSSGVAIQFRNEEESEAFHCVFQQWKKGFDVQGGNLPNGTDVITSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVLENRADFVGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLVAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLIPNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVLDFTKIKEEELYEIDIPLRFTATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRMHLIAHTAQSYTIFLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLTQDQQPQPFLQTQDIDIQSQDLDEVEIMQQPSPKSCAQIDSLMQNAS*