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Report for Sequence Feature Glyma.15g140200

Feature Type:gene_model
Chromosome:Gm15
Start:11461119
stop:11467932
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g140200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G06650.1AT ATP-citrate lyase B-1 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0044262GO-bp cellular carbohydrate metabolic process JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0046912GO-mf transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer EnsemblGenomesN/AIEA
GO:0046912GO-mf transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer JGI N/AIEA
KOG1254 KOG ATP-citrate lyase JGI N/AIEA
PTHR26330Panther JGI N/AIEA
PF00285PFAM Citrate synthase JGI N/AIEA
PF00549PFAM CoA-ligase JGI N/AIEA
PWY-5172SoyCyc9 acetyl-CoA biosynthesis III (from citrate) Plant Metabolic Network ISS
PWY-5173SoyCyc9 superpathway of acetyl-CoA biosynthesis Plant Metabolic Network ISS
GN7V-53058SoyCyc9-rxn ATP citrate synthase Plant Metabolic Network ISS

Expression Patterns of Glyma.15g140200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g140200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g15010 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.15g140200
>Glyma.15g140200.2 sequence-type=transcript locus=Glyma.15g140200 ID=Glyma.15g140200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTCTTTTTTATCCAATGCAATCAAAAGGTTCACCAAAAAAGAATAATAGGGGTCACGTAGCATTACGGCTCTCTATTATTATTTAACCGTGTGAACTAACGAATCATATTACCACAAATTCAGAACATACTCTTCAGTCTTCACTTTGGTACTTCACAAGTATAGCTGGGCTTTTTTTGTTTGCTTTTCCATTACATTTTCAAACTCTTCATACAAATTCATCCAAGCGTCACTGGTAATATTCCACTTGTTTGTAGGAACGGATCTTGAAAATATTTGAGGGATATTAAAGATCTATCTTTTTCTTTGTCATGGCCACTGGACAACTATTCTCCCGTACTACACAATCTTTATTTTACAACTACAAGCAACTTTACATCCAGAGGATGCTTGATTTTGACTTCCTTTGTGGCAGGGAAACACCATCAGTTTCTGGAATAATTAGCCCTGGTTCTGAGGGATTTCAAAAACTTTTTTTTGGTCAGGAGGAAATTGCCATCCCAGTTCATGCTACCATTGAAGCAGCTTGTGCTGCACATCCTACTGCTGATGTCTTCATCAACTTTGCTTCATTTAGAAGCGCTGCAGCAGCATCCATGGCTGCCTTGAAGCAGCCAACGATCAGAGTTGTTGCTATTATTGCTGAAGGAGTACCTGAGTCAGACACTAAGCAATTGGTTGCGTATGCCCGGGCAAACAATAAGGTTGTTATTGGTCCAGCCACTGATGGAGGCATTCAAGCAGGTGCTTTTAAAATTGGCGACACAGCTGGAACAATTGACAATATAATTCACTGCAAGCTCTATAGGCCAGGATCTGTTGGATTTGTATCTAAATCTGGGGGGATGTCCAATGAATTATATAACACTATCGCCCGCGTAACTGATGGGATTTATGAAGGCATTGACATTGGAGGAGATGCTTTCCCAGGCTCCACACTTTCTGACCATGTTTTACGGTTTAACAACATACCACAGATTAAAATGATGGTAGTACTTGGAGAACTTGGTGGGCGTGATGAGTATTCCTTAGTGGACGCCCTAAAACAAGGAAAAGTATCAAAACCGGTTGTGGCCTGGGTTGATCATGAAGGAGCTAAAAGTGGCAGTCAGTTGGAGTCTGCTCAAGCAAAGAATCAGGCACTAAGGGACGCTGGAGCTGTTGTTCCCACATCATATGAAACTTTTGAAGCTGCAATTAAGGAAGCATTTGACAAGTTGGTTGAAGAAGGGAATATCACACCAGTCAAGGAAACCACTCCTCCACCAATCCCCGAGGACCTTAACTCTGCAATCAAGAGTGGAAAAGTCCGTGCTCCAACTCATATTATTTCCACCATTTCTGATGAGAGAGGTGAGGAGCAATGCTATGCTGGTGTATCCATGTCTTCCATTATTGAAGAAGGTTATGGTGTTGGTGGTGTGGTCTCTCTTTTATGGTTTAAACGCAGCCTTCCCCATTACTGTACTCAATTTATTGAGATGTGCATCATGCTATGTGCCGACCATGGTCCTTGTGCCTCAGGTGCTCACAATGCTATCGTGACAGCAAGGGCCGGGAAGGACCTAATTTCCAGTATTGTATCAGGTATGCTTACAATTGGTCCTCGATTTGGGGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTCATGACAGGGTATGAAAAAGAAGGGAATTCGTGTGCCAGGAATAGGACACAGGGTAAAGAATAAGGACAACAAAGATAAGAGAGTAGAGCTACTACAAAAGTTTGCACGCACACATTTCCCTTGCGTGAAGTACATGGAATATGCTATTCAAGTTGAAGACTACACCCTCTCAAAGGCAAATAATTTAATTCTAAACGTGGATGGTGCAATTGCATCTCTTTTCTTGGATCTTTTTGTTGGCAGTGGACTGTTCAGCAAACAAGAGATTGATGAAATTGTGGAGATTGGCTATCTGAATGGCTTCTTTGTGCTGGCACGCTGCATTGGTCTGATTGGGCACACTTTTGACCAAAAGCGATTGAAGCAACCACTTTACCGTCACCCATGGGAAGATGTTCTCTACACAAAGTGAGGAAGTTTTGTCTGACTATAAGAACTTTGCCATGCTTCAAATTGGGAAATCATGCATCTGAAATAAGCTGGAGGGATTTTTTAGCTGTTAGACTAGTGTTGTACGATCCATTGGTGAAAAGTCGTCTTCCAATCATAACATGTATTAACTTTCATAATATAAAAATACACATGTTTTTATTATTTCTTATTCTCATTGTAAGAGGTGAGTATATTGGATTTGTATGGGAGATTTTCTACAATAATTACCTATCTCTACTTCTTTCTTA
Coding sequences of Glyma.15g140200
>Glyma.15g140200.1 sequence-type=CDS polypeptide=Glyma.15g140200.1.p locus=Glyma.15g140200 ID=Glyma.15g140200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCACTGGACAACTATTCTCCCGTACTACACAATCTTTATTTTACAACTACAAGCAACTTTACATCCAGAGGATGCTTGATTTTGACTTCCTTTGTGGCAGGGAAACACCATCAGTTTCTGGAATAATTAGCCCTGGTTCTGAGGGATTTCAAAAACTTTTTTTTGGTCAGGAGGAAATTGCCATCCCAGTTCATGCTACCATTGAAGCAGCTTGTGCTGCACATCCTACTGCTGATGTCTTCATCAACTTTGCTTCATTTAGAAGCGCTGCAGCAGCATCCATGGCTGCCTTGAAGCAGCCAACGATCAGAGTTGTTGCTATTATTGCTGAAGGAGTACCTGAGTCAGACACTAAGCAATTGGTTGCGTATGCCCGGGCAAACAATAAGGTTGTTATTGGTCCAGCCACTGATGGAGGCATTCAAGCAGGTGCTTTTAAAATTGGCGACACAGCTGGAACAATTGACAATATAATTCACTGCAAGCTCTATAGGCCAGGATCTGTTGGATTTGTATCTAAATCTGGGGGGATGTCCAATGAATTATATAACACTATCGCCCGCGTAACTGATGGGATTTATGAAGGCATTGACATTGGAGGAGATGCTTTCCCAGGCTCCACACTTTCTGACCATGTTTTACGGTTTAACAACATACCACAGATTAAAATGATGGTAGTACTTGGAGAACTTGGTGGGCGTGATGAGTATTCCTTAGTGGACGCCCTAAAACAAGGAAAAGTATCAAAACCGGTTGTGGCCTGGGTTGATCATGAAGGAGCTAAAAGTGGCAGTCAGTTGGAGTCTGCTCAAGCAAAGAATCAGGCACTAAGGGACGCTGGAGCTGTTGTTCCCACATCATATGAAACTTTTGAAGCTGCAATTAAGGAAGCATTTGACAAGTTGGTTGAAGAAGGGAATATCACACCAGTCAAGGAAACCACTCCTCCACCAATCCCCGAGGACCTTAACTCTGCAATCAAGAGTGGAAAAGTCCGTGCTCCAACTCATATTATTTCCACCATTTCTGATGAGAGAGGTGAGGAGCAATGCTATGCTGGTGTATCCATGTCTTCCATTATTGAAGAAGGTTATGGTGTTGGTGGTGTGGTCTCTCTTTTATGGTTTAAACGCAGCCTTCCCCATTACTGTACTCAATTTATTGAGATGTGCATCATGCTATGTGCCGACCATGGTCCTTGTGCCTCAGGTGCTCACAATGCTATCGTGACAGCAAGGGCCGGGAAGGACCTAATTTCCAGTATTGTATCAGGTATGCTTACAATTGGTCCTCGATTTGGGGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTCATGACAGGGGGCTTACGCCTTATGAGTTTGTTGAAGGTATGAAAAAGAAGGGAATTCGTGTGCCAGGAATAGGACACAGGGTAAAGAATAAGGACAACAAAGATAAGAGAGTAGAGCTACTACAAAAGTTTGCACGCACACATTTCCCTTGCGTGAAGTACATGGAATATGCTATTCAAGTTGAAGACTACACCCTCTCAAAGGCAAATAATTTAATTCTAAACGTGGATGGTGCAATTGCATCTCTTTTCTTGGATCTTTTTGTTGGCAGTGGACTGTTCAGCAAACAAGAGATTGATGAAATTGTGGAGATTGGCTATCTGAATGGCTTCTTTGTGCTGGCACGCTGCATTGGTCTGATTGGGCACACTTTTGACCAAAAGCGATTGAAGCAACCACTTTACCGTCACCCATGGGAAGATGTTCTCTACACAAAGTGA

>Glyma.15g140200.2 sequence-type=CDS polypeptide=Glyma.15g140200.2.p locus=Glyma.15g140200 ID=Glyma.15g140200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCACTGGACAACTATTCTCCCGTACTACACAATCTTTATTTTACAACTACAAGCAACTTTACATCCAGAGGATGCTTGATTTTGACTTCCTTTGTGGCAGGGAAACACCATCAGTTTCTGGAATAATTAGCCCTGGTTCTGAGGGATTTCAAAAACTTTTTTTTGGTCAGGAGGAAATTGCCATCCCAGTTCATGCTACCATTGAAGCAGCTTGTGCTGCACATCCTACTGCTGATGTCTTCATCAACTTTGCTTCATTTAGAAGCGCTGCAGCAGCATCCATGGCTGCCTTGAAGCAGCCAACGATCAGAGTTGTTGCTATTATTGCTGAAGGAGTACCTGAGTCAGACACTAAGCAATTGGTTGCGTATGCCCGGGCAAACAATAAGGTTGTTATTGGTCCAGCCACTGATGGAGGCATTCAAGCAGGTGCTTTTAAAATTGGCGACACAGCTGGAACAATTGACAATATAATTCACTGCAAGCTCTATAGGCCAGGATCTGTTGGATTTGTATCTAAATCTGGGGGGATGTCCAATGAATTATATAACACTATCGCCCGCGTAACTGATGGGATTTATGAAGGCATTGACATTGGAGGAGATGCTTTCCCAGGCTCCACACTTTCTGACCATGTTTTACGGTTTAACAACATACCACAGATTAAAATGATGGTAGTACTTGGAGAACTTGGTGGGCGTGATGAGTATTCCTTAGTGGACGCCCTAAAACAAGGAAAAGTATCAAAACCGGTTGTGGCCTGGGTTGATCATGAAGGAGCTAAAAGTGGCAGTCAGTTGGAGTCTGCTCAAGCAAAGAATCAGGCACTAAGGGACGCTGGAGCTGTTGTTCCCACATCATATGAAACTTTTGAAGCTGCAATTAAGGAAGCATTTGACAAGTTGGTTGAAGAAGGGAATATCACACCAGTCAAGGAAACCACTCCTCCACCAATCCCCGAGGACCTTAACTCTGCAATCAAGAGTGGAAAAGTCCGTGCTCCAACTCATATTATTTCCACCATTTCTGATGAGAGAGGTGAGGAGCAATGCTATGCTGGTGTATCCATGTCTTCCATTATTGAAGAAGGTTATGGTGTTGGTGGTGTGGTCTCTCTTTTATGGTTTAAACGCAGCCTTCCCCATTACTGTACTCAATTTATTGAGATGTGCATCATGCTATGTGCCGACCATGGTCCTTGTGCCTCAGGTGCTCACAATGCTATCGTGACAGCAAGGGCCGGGAAGGACCTAATTTCCAGTATTGTATCAGGTATGCTTACAATTGGTCCTCGATTTGGGGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTCATGACAGGGTATGA
Predicted protein sequences of Glyma.15g140200
>Glyma.15g140200.1.p sequence-type=predicted peptide transcript=Glyma.15g140200.1 locus=Glyma.15g140200 ID=Glyma.15g140200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATGQLFSRTTQSLFYNYKQLYIQRMLDFDFLCGRETPSVSGIISPGSEGFQKLFFGQEEIAIPVHATIEAACAAHPTADVFINFASFRSAAAASMAALKQPTIRVVAIIAEGVPESDTKQLVAYARANNKVVIGPATDGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIDIGGDAFPGSTLSDHVLRFNNIPQIKMMVVLGELGGRDEYSLVDALKQGKVSKPVVAWVDHEGAKSGSQLESAQAKNQALRDAGAVVPTSYETFEAAIKEAFDKLVEEGNITPVKETTPPPIPEDLNSAIKSGKVRAPTHIISTISDERGEEQCYAGVSMSSIIEEGYGVGGVVSLLWFKRSLPHYCTQFIEMCIMLCADHGPCASGAHNAIVTARAGKDLISSIVSGMLTIGPRFGGAIDDAARYFKDAHDRGLTPYEFVEGMKKKGIRVPGIGHRVKNKDNKDKRVELLQKFARTHFPCVKYMEYAIQVEDYTLSKANNLILNVDGAIASLFLDLFVGSGLFSKQEIDEIVEIGYLNGFFVLARCIGLIGHTFDQKRLKQPLYRHPWEDVLYTK*

>Glyma.15g140200.2.p sequence-type=predicted peptide transcript=Glyma.15g140200.2 locus=Glyma.15g140200 ID=Glyma.15g140200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATGQLFSRTTQSLFYNYKQLYIQRMLDFDFLCGRETPSVSGIISPGSEGFQKLFFGQEEIAIPVHATIEAACAAHPTADVFINFASFRSAAAASMAALKQPTIRVVAIIAEGVPESDTKQLVAYARANNKVVIGPATDGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIDIGGDAFPGSTLSDHVLRFNNIPQIKMMVVLGELGGRDEYSLVDALKQGKVSKPVVAWVDHEGAKSGSQLESAQAKNQALRDAGAVVPTSYETFEAAIKEAFDKLVEEGNITPVKETTPPPIPEDLNSAIKSGKVRAPTHIISTISDERGEEQCYAGVSMSSIIEEGYGVGGVVSLLWFKRSLPHYCTQFIEMCIMLCADHGPCASGAHNAIVTARAGKDLISSIVSGMLTIGPRFGGAIDDAARYFKDAHDRV*






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