SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.15g138200

Feature Type:gene_model
Chromosome:Gm15
Start:11251741
stop:11255253
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.15g138200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G49540.1AT JGI N/AIEA
GO:0005783GO-cc endoplasmic reticulum JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0072546GO-cc EMC complex JGI N/AIEA
KOG4455 KOG Uncharacterized conserved protein JGI N/AIEA
PTHR20994PantherFam UNCHARACTERIZED JGI N/AIEA
PF07019Pfam EMC6 JGI N/AIEA

Gene model name correspondences to Glyma.15g138200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g14760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g138200
>Glyma.15g138200.1 sequence-type=CDS polypeptide=Glyma.15g138200.1.p locus=Glyma.15g138200 id=Glyma.15g138200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGTACATTCCGAATCAGCTTCATCAGAGAAGAAATCAAGCAATGGAGTGAATGAGTTGCTGACTTTTAATGCTGAGAATATGCAAAGCAACATGAAAATTATCTATTACAGCCGAACATTTTTATCTATAATTGGTGGCGTTGTTGCTGGAATTTTGGGATTTACAGGCTTGAAAGGATTTGTGTTTTATTTACTTCTCATGGCACTTACTTCACTTGGGCTTGTGGCCAAAGCAAAATTTTCAACCCACACATACTTTGACTCCTGGAATCGAGTGCTACTTGATGGCTTTCAGGGTGGCCTAATGTCGTTCGTGCTGTTCTGGACATTTGCCTATGACATTGTTCATATATTTTGA

>Glyma.15g138200.3 sequence-type=CDS polypeptide=Glyma.15g138200.3.p locus=Glyma.15g138200 id=Glyma.15g138200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGTACATTCCGAATCAGCTTCATCAGAGAAGAAATCAAGCAATGGAGTGAATGAGTTGCTGACTTTTAATGCTGAGAATATGCAAAGCAACATGAAAATTATCTATTACAGCCGAACATTTTTATCTATAATTGGTGGCGTTGTTGCTGGAATTTTGGGATTTACAGGCTTGAAAGGATTTGTGTTTTATTTACTTCTCATGGCACTTACTTCACTTGGGCTTGTGGCCAAAGCAAAATTTTCAACCCACACATACTTTGACTCCTGGAATCGAGTGCTACTTGATGGCTTTCAGGGTGGCCTAATGGTAGGTTGTTTATGTTCATTTCATCTTTCTTTGGGCATGGTGTCTATGGGAAACTTCTTAGTCTTCTTTATTTTTTATGAAAGAAATTAG
Predicted protein sequences of Glyma.15g138200
>Glyma.15g138200.1.p sequence-type=predicted peptide transcript=Glyma.15g138200.1 locus=Glyma.15g138200 id=Glyma.15g138200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVHSESASSEKKSSNGVNELLTFNAENMQSNMKIIYYSRTFLSIIGGVVAGILGFTGLKGFVFYLLLMALTSLGLVAKAKFSTHTYFDSWNRVLLDGFQGGLMSFVLFWTFAYDIVHIF*

>Glyma.15g138200.3.p sequence-type=predicted peptide transcript=Glyma.15g138200.3 locus=Glyma.15g138200 id=Glyma.15g138200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVHSESASSEKKSSNGVNELLTFNAENMQSNMKIIYYSRTFLSIIGGVVAGILGFTGLKGFVFYLLLMALTSLGLVAKAKFSTHTYFDSWNRVLLDGFQGGLMVGCLCSFHLSLGMVSMGNFLVFFIFYERN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo