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Report for Sequence Feature Glyma.15g097800

Feature Type:gene_model
Chromosome:Gm15
Start:7595271
stop:7602287
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g097800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G20020.1AT protein arginine methyltransferase 6 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006364GO-bp rRNA processing JGI N/AIEA
GO:0006479GO-bp protein methylation EnsemblGenomesN/AIEA
GO:0006479GO-bp protein methylation JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0019919GO-bp peptidyl-arginine methylation, to asymmetrical-dimethyl arginine EnsemblGenomesN/AIEA
GO:0032259GO-bp methylation EnsemblGenomesN/AIEA
GO:0034969GO-bp histone arginine methylation EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0008168GO-mf methyltransferase activity EnsemblGenomesN/AIEA
GO:0008168GO-mf methyltransferase activity JGI N/AIEA
GO:0008276GO-mf protein methyltransferase activity JGI N/AIEA
GO:0008469GO-mf histone-arginine N-methyltransferase activity EnsemblGenomesN/AIEA
GO:0008649GO-mf rRNA methyltransferase activity JGI N/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity JGI N/AIEA
GO:0035242GO-mf protein-arginine omega-N asymmetric methyltransferase activity EnsemblGenomesN/AIEA
KOG1499 KOG Protein arginine N-methyltransferase PRMT1 and related enzymes JGI N/AIEA
PTHR11006Panther PROTEIN ARGININE N-METHYLTRANSFERASE JGI N/AIEA
PTHR11006:SF43Panther JGI N/AIEA
PF06325PFAM Ribosomal protein L11 methyltransferase (PrmA) JGI N/AIEA

Expression Patterns of Glyma.15g097800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g097800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g10450 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g097800
>Glyma.15g097800.1 sequence-type=CDS polypeptide=Glyma.15g097800.1.p locus=Glyma.15g097800 ID=Glyma.15g097800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGGTTGTTCTTGATGTTGGATGCGGTACTGGCATCCTTGCTATACTCTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAGTTGAAGCAACTCATGACATTGCACATGCGACAAGCAAAGTAGTTGAAGATAACAATCTTTCAAATATTATCACGGTATTGCAAGGACGAATTGAGGATGTTGAAATCAAGGAACAAGTTGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTACATAAGAACATGCTGGAAAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCAGGAGGTCTAATGCTTCCTTCAAAGGCAACGTTGTACATGGCTCCTGTTACAAATACCAAAAGATACGAGGAAAGCATTAACTACTGGAATAGTGTTTATGGAATTAATATGTCTGCATTTAAACCATTAGCAAAACAGAGTGCATTCCTGGGACCTTGTGTGGAGACAATTACTTTTGAAAATGTTTTGGCAAGGCCACAAGTGGTGAAATGCGTGAACTGTGATTCTGTTACCATTCCTGAGCTACGATCTGTGACAGAAAGCTTTAAGTTCAACTCAACGGTGAAAGCACCGCTACATGGTTTTGCGTTTTGGTTTGATGTTGAGTTTGGACCATCACCAATGCCACTCAGTATTCGTTACCCGACTTCATCTGTTGACGATCATCCTCCGGTGGATAGTCAAACAAGAAGAGACCCTACGCTGCTCCTGTCCACTGCACCTAATGTCCTGCCAACACATTGGCAACAGACCTTGATATACTTTTTTGATCCAAAAGATCTGAAACAAGATCAACTCATTGAAGGAAGAGTGACATTGTCACAGAATCAAGCAAGTTCCCGGCTTCTGGATGTTAAAATTGCATATGACACAGGAGGTCAATCCCATGTGAAATATTCTTTTCTGAGATGA
Predicted protein sequences of Glyma.15g097800
>Glyma.15g097800.1.p sequence-type=predicted peptide transcript=Glyma.15g097800.1 locus=Glyma.15g097800 ID=Glyma.15g097800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQVVLDVGCGTGILAILCAQAGAKRVYAVEATHDIAHATSKVVEDNNLSNIITVLQGRIEDVEIKEQVDVIISEWMGYMLLHKNMLESVITARDRWLKPGGLMLPSKATLYMAPVTNTKRYEESINYWNSVYGINMSAFKPLAKQSAFLGPCVETITFENVLARPQVVKCVNCDSVTIPELRSVTESFKFNSTVKAPLHGFAFWFDVEFGPSPMPLSIRYPTSSVDDHPPVDSQTRRDPTLLLSTAPNVLPTHWQQTLIYFFDPKDLKQDQLIEGRVTLSQNQASSRLLDVKIAYDTGGQSHVKYSFLR*






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