SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.15g092500

Feature Type:gene_model
Chromosome:Gm15
Start:7143422
stop:7154233
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.15g092500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G18390.1AT TCP2 JGI N/AIEA
PTHR31072PantherFam TRANSCRIPTION FACTOR TCP4-RELATED JGI N/AIEA
PF03634Pfam TCP family transcription factor JGI N/AIEA

Proteins Associated with Glyma.15g092500
LocusGene SymbolProtein Name
TCP42 Teosinte branched1 and cycloidea and proliferating cell factor family protein gene 42
TCP TEOSINTE-BRANCHED1/CYCLOIDEA/PCF Transcription Factor

Gene model name correspondences to Glyma.15g092500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g09910 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g092500
>Glyma.15g092500.1 sequence-type=CDS polypeptide=Glyma.15g092500.1.p locus=Glyma.15g092500 id=Glyma.15g092500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGAGGATGAGATTCAAGCATGTAAGTTCCCTAGAGTTGGAAATGGTAGGAGTAGTGACCAATACCAAGAGGAGGAAGAAGAGGGTGACCTAAGAAGAAAAGGTGTTGGTGGTGGTGGTGGAAGTGATGCTAGCACAAACCACTTCCACCAAAGTAGTTGGCACTACTCTTCTAGAATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAAGTGATGACCTCAAAAGGGTTAAGAGACAGAAGGGTTAGGCTCTCTGTGACCACAGCTATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTACGACCAACCTAGCAAAGCTGTGGAGTGGCTAATCAAAGCTGCTTCAGAAGCTATCTCTGAGCTTCCTTCTCTCAACAACCCTTTCCCTGATACCCCTAAGCAGCCTAGTGATGAGAAAAGGCCTACCAGTGGTGGTGGTCAACAACAACAACAACAAGGCTTTGATGATGCAGATGGAGACACAAATTACCAACAAAACCAAAGCCAGAATCTTTCTCTCTCCAAGTCTGCTTGTAGCAGCACTTCCGAGACAAGCAAGGGCTCAGGCTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAACCGTGTGAAGGCAAGGGAGAGGGCAAGGGAGAGAGCAGCAAAAGAGAAGGAGAAGGAGAAAGAGAAAGAGAGTGATTTTAACATTGCACACCACCATCACCACCACAATGTGAACAACATGTCTCACACTGCTTCCTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACGGTAACAGTTAACCCCAACACAACAACAACAACAACAACAACAGCAACAAGTCCTAATGGATCATCGGTTCATCAGATCCATGAGGGTCATGATCATGAGGCTAATCTATTCAACAAGGGAAGTCAACAACAGCAACAGCAACAACATCACCATTGGTCTCAAACAGTGACACCTATGGACTACTTCAGCGCAGGCCTCTTGGTAGGACCTTCATCATCTGCAAGTACTCAACAACACCAATCTTCAGGACAGTTCCAACTGGGACATGGACATGCACATGCACATGCTCTTTCAATCTCACCATTTAGTGGAGAAAACCACTCGGAGCAAATGCAGCATTTTTCCTTCATGCCAGACCATCTCAACAACATGCCATCTTCTGCTGCTTCTGCTTCTCAACACAGCGAGGGTGACAATAACAACTACAACCTCAACTTCAGCATCTCTTCGTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTTCCTCGTTTTTGCCTCTCCTTCAGAGGTTTCAACCTTTAGTCGACGGATCCTCCAATCTACCTTTCTTTATAGGAGCTGCTCCTCCTTCTTCTGCTCCTCCAACCATGGACAACAACAACAGCAACAACAGCAACAACCATCACCACCTTCAGTTCTCACCCATCTTTGATGGCCGCTTGCAACTTTGCTATGGCGATGGAACAAGGCAGCATTCTGATCACAAGGGGAAGGGAAAGAACTAA
Predicted protein sequences of Glyma.15g092500
>Glyma.15g092500.1.p sequence-type=predicted peptide transcript=Glyma.15g092500.1 locus=Glyma.15g092500 id=Glyma.15g092500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEEDEIQACKFPRVGNGRSSDQYQEEEEEGDLRRKGVGGGGGSDASTNHFHQSSWHYSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASEAISELPSLNNPFPDTPKQPSDEKRPTSGGGQQQQQQGFDDADGDTNYQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKEKEKESDFNIAHHHHHHNVNNMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTATSPNGSSVHQIHEGHDHEANLFNKGSQQQQQQQHHHWSQTVTPMDYFSAGLLVGPSSSASTQQHQSSGQFQLGHGHAHAHALSISPFSGENHSEQMQHFSFMPDHLNNMPSSAASASQHSEGDNNNYNLNFSISSSGLAGYNRGTLQSNSPSSSFLPLLQRFQPLVDGSSNLPFFIGAAPPSSAPPTMDNNNSNNSNNHHHLQFSPIFDGRLQLCYGDGTRQHSDHKGKGKN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo