SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.15g092000

Feature Type:gene_model
Chromosome:Gm15
Start:7076557
stop:7081505
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.15g092000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G21070.1AT ATBRCA1,BRCA1 JGI N/AIEA
6.3.2.19EC JGI N/AIEA
K10683KEGG DNA repair and recombination proteins JGI N/AIEA
KOG4362 KOG Transcriptional regulator BRCA1 JGI N/AIEA
PTHR13763PantherFam BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 JGI N/AIEA
PF00533Pfam BRCA1 C Terminus (BRCT) domain JGI N/AIEA
PF13771Pfam PHD-like zinc-binding domain JGI N/AIEA
PF13920Pfam Zinc finger, C3HC4 type (RING finger) JGI N/AIEA

Proteins Associated with Glyma.15g092000
LocusGene SymbolProtein Name
PPR138 Psudo-Response Regulator gene 138

Gene model name correspondences to Glyma.15g092000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g09865 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g092000
>Glyma.15g092000.5 sequence-type=CDS polypeptide=Glyma.15g092000.5.p locus=Glyma.15g092000 id=Glyma.15g092000.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGATCTAGAGAGAATGGCCAGAGAACTTATATGTCCCATCTGTTGGAGTTTGCTCGATTCTGCAGTGTCGCTTACCTGCAATCATCTTTTCTGCAACTCGTGCGTTTTCAAGTCCATGAAATCAGCCTCTGCTTGTCCTGTCTGTAAAATTCCTTTCACTCGTCGAGAGGTTCGCCCTGCTCCTCACATGGACAACTTGGTCAGCATATATAAAAACATGGAAGCTGCTTCAGGAGTTAATATATTTGAAACCCAGAATGCACCTGTTACTAACTTATCTGATGGAGAAAAGCAATGTGAAGTTGATGCTAACTCTGGCAAGATGGAAGCTGGTGGAACTCATACAGGTCGTCCGCGGGAGAAGAAAACCCGGAAGAAGAAGGAGTCTAAGAAGACGGTTCAGGCCAGCATGGAAAGCTCAGGTTCTGACTTTGCAAAGCCTTCTTTTCCAGCAAAGAAAAGGGTACAGGTGCCGCAAAATCTCCTTTCAGAAACTCCAATGAAGAGTTTGAAGATTGGAGTTTCACTTAGTGAAATTAACAAAGAGAAAGAGGGAACAGAAAAGGTCCCAGTCATGGAAAGTGAAAGGCCCCTCCAAAGGGAAAAAGATAATCCTGTTCTCTCACCTTTCTTTTGGTTGAGAGAGGAAAAAGACGGTGAAAGGTTAAGTCAACAAACTGATGATGATGAAATTATTGATGGCTCAACACCAAATCCTCCTTCATTCAGTGATCTCAAGGACTCCGATGATGAAATCCCTTCTAATGTGGCCCCTATGGATGAGGTGCAAAATAAAGGCTCTGTTAATTTATTTGACAGTGAAATGTTTGAATGGACACAAAGGCCTTGCACTCCTGAATTATTTTCAAGTCCCTCCAAAATGCAGCTGCAGGTCATGGATACTTATGAGGATGATGAAAATCAAGAGGAATTGGTGGCTTCCTCACTAGAGCTGGCGGAAAATCAGCCAAGAGTTGATGCTGGCAACATGAAATTTGATAATCCCAAAGAAGGAAATATAATGGCTGATGTATTACCACCGAGTGTGTCTCCTCAAATTAGAAGTTCTGATGATCTAAATGGAATGAAGAAGTCTACGAAAAGAAGAAGGAAGGGTAGAGATAAAAATAAACAAGAGCATATTGGGGAACCAAAAAATTCAATTGATGAAATGCATGTTGATTCATATATATCATTAGAGGTTACTCAGGAACAAGCATTGGACAAATCTTCTAATCCGAGGAAGGATAGTAGAAGAGACAAGAGGGTTTGTTTCAATACCAGTACAATTCCAACGCCTATAACTGCTTGTACAGTCCCCAATACATTAGGAGTTCAAAGCATTGGTGAAATGAAGAAGGCTAAGAATACAGATATTTCGCCATTGAAACAAGAAAATGAGAAGCATCATGCTCAGGAGATTTCTGGAAAAAGCCGGATGAAAAGATCTGGAAAACAAAATGTCAGTCAAACCAATGAGTTTGCTGGTTCTGATTCATCCATTTTCAGTCTGCAAACAGATAATAACGGGAAGGACTCTAATAGCAGGCAATGCAAAAGCAAGTATTCCAGAAAATCTATGTCTTGCAGTAAAGAATTGAAAGCTACTAAAAGGCAAAAGCTTTCCTCTGATTGTATCTCTAAGACTAAAAATGTTGAAGAAATTCTACCTATTGAAAGTATTCATCAAGGTCCTGATGTCAGGGATTTGAATGATACATCAAAAGAGAAACATTGTCCTTTGATGGATCAAACAGCTTTAAGGAAATGTGAGAGCCATGTCACAAAGTATCAATGCATTTTCTGTCTCTCATCAGAAGAATCAGAGACTTCTGGCCCTATGGTGCATTACCTTGATGGCAGGCCTGTAACAGCAGATTATGAAGGGGGATCTAAAGTCACGCATTGTCACAGGAACTGCACAGAATGGGCCCCCAATGTATATTTTGACGGTGATAATGCAATAAATCTTGAAGCTGAAATAAGTAGAAGTCGAAGAATCAAATGTAGTTTTTGTGGACTAAAAGGGGCCGCACTTGGTTGTTATGAGAAAAGCTGTCGCAGGAGCTTTCATGTTCCGTGTGCCAACTGGACTTCTCAATGTCGATGGGATACGCAAAACTTTGTCATGTTATGCCCTCTGCATGCTTCCTCCATGTTGCCCTGTGAAGGTTCAGGATCCCAAAAAAGGAGCAAGAAATGCGCAGCTAGCGAGGGTAAAAACCATGGTCTTAAACATGACACTACAAACCAAAGTCGGGCTGCTCATAGATCATACAAGAAAATTGTACTATGTTGTTCTGCTCTATCCGTACAGGAGAGGGAAGTTGTTTCCGAATTTGAACGAGTATCGAAAGCTGCAGTTTTGAAAAATTGGGACTCGAGTGTCACCCATGTTATAGCATCAACGGATGAAAATGGGGCATGCAGAAGGACCCTCAAAGTATTGTTGGGTATCCTGGAGGGAAAGTGGATTCTCAATATTGAGTGGATTAAAGCTTGCATGAAAGAAATGGGTCCTGTTGATGAGGAGCGATATGAAATTAATGTCGACATCCATGGAATTAGAGATGGTCCTCGTCTTGGACGACTAAGAGTATTGAACAAGCAACCAAAGCTTTTTTATGGCTACAAGTTTTATGTTATGGGAGATTTTATACCTTCGTACAAGGGGTATCTGCAAGACCTTTTGGTTGCTGCTGGAGGGATAATTCTGCACAGAAAACCAGTGTCTGGTGACCAAGAATCAACATCACCAGATACGCATCCATACCAAACCCTTATAATTTACAGCCTCGAGCTTCCTGATAAATGCAAGCCTTTGAAAAAGGATACAATTTGCAGCCAAAGGCGTCATGATGCGGAGGTTCTGGCAAGTTCTACAGGTTCAAAGGTAGCAAGTAATACATGGATTCTGAATTCAATTGCAGCCTGCAAACTGAAATGCCTTGCTCAATGA

>Glyma.15g092000.6 sequence-type=CDS polypeptide=Glyma.15g092000.6.p locus=Glyma.15g092000 id=Glyma.15g092000.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGATCTAGAGAGAATGGCCAGAGAACTTATATGTCCCATCTGTTGGAGTTTGCTCGATTCTGCAGTGTCGCTTACCTGCAATCATCTTTTCTGCAACTCGTGCGTTTTCAAGTCCATGAAATCAGCCTCTGCTTGTCCTGTCTGTAAAATTCCTTTCACTCGTCGAGAGGTTCGCCCTGCTCCTCACATGGACAACTTGGTCAGCATATATAAAAACATGGAAGCTGCTTCAGGAGTTAATATATTTGAAACCCAGAATGCACCTGTTACTAACTTATCTGATGGAGAAAAGCAATGTGAAGTTGATGCTAACTCTGGCAAGATGGAAGCTGGTGGAACTCATACAGGTCGTCCGCGGGAGAAGAAAACCCGGAAGAAGAAGGAGTCTAAGAAGACGGTTCAGGCCAGCATGGAAAGCTCAGGTTCTGACTTTGCAAAGCCTTCTTTTCCAGCAAAGAAAAGGGTACAGGTGCCGCAAAATCTCCTTTCAGAAACTCCAATGAAGAGTTTGAAGATTGGAGTTTCACTTAGTGAAATTAACAAAGAGAAAGAGGGAACAGAAAAGGTCCCAGTCATGGAAAGTGAAAGGCCCCTCCAAAGGGAAAAAGATAATCCTGTTCTCTCACCTTTCTTTTGGTTGAGAGAGGAAAAAGACGGTGAAAGGTTAAGTCAACAAACTGATGATGATGAAATTATTGATGGCTCAACACCAAATCCTCCTTCATTCAGTGATCTCAAGGACTCCGATGATGAAATCCCTTCTAATGTGGCCCCTATGGATGAGGTGCAAAATAAAGGCTCTGTTAATTTATTTGACAGTGAAATGTTTGAATGGACACAAAGGCCTTGCACTCCTGAATTATTTTCAAGTCCCTCCAAAATGCAGGTCATGGATACTTATGAGGATGATGAAAATCAAGAGGAATTGGTGGCTTCCTCACTAGAGCTGGCGGAAAATCAGCCAAGAGTTGATGCTGGCAACATGAAATTTGATAATCCCAAAGAAGGAAATATAATGGCTGATGTATTACCACCGAGTGTGTCTCCTCAAATTAGAAGTTCTGATGATCTAAATGGAATGAAGAAGTCTACGAAAAGAAGAAGGAAGGGTAGAGATAAAAATAAACAAGAGCATATTGGGGAACCAAAAAATTCAATTGATGAAATGCATGTTGATTCATATATATCATTAGAGGTTACTCAGGAACAAGCATTGGACAAATCTTCTAATCCGAGGAAGGATAGTAGAAGAGACAAGAGGGTTTGTTTCAATACCAGTACAATTCCAACGCCTATAACTGCTTGTACAGTCCCCAATACATTAGGAGTTCAAAGCATTGGTGAAATGAAGAAGGCTAAGAATACAGATATTTCGCCATTGAAACAAGAAAATGAGAAGCATCATGCTCAGGAGATTTCTGGAAAAAGCCGGATGAAAAGATCTGGAAAACAAAATGTCAGTCAAACCAATGAGTTTGCTGGTTCTGATTCATCCATTTTCAGTCTGCAAACAGATAATAACGGGAAGGACTCTAATAGCAGGCAATGCAAAAGCAAGTATTCCAGAAAATCTATGTCTTGCAGTAAAGAATTGAAAGCTACTAAAAGGCAAAAGCTTTCCTCTGATTGTATCTCTAAGACTAAAAATGTTGAAGAAATTCTACCTATTGAAAGTATTCATCAAGGTCCTGATGTCAGGGATTTGAATGATACATCAAAAGAGAAACATTGTCCTTTGATGGATCAAACAGCTTTAAGGAAATGTGAGAGCCATGTCACAAAGTATCAATGCATTTTCTGTCTCTCATCAGAAGAATCAGAGACTTCTGGCCCTATGGTGCATTACCTTGATGGCAGGCCTGTAACAGCAGATTATGAAGGGGGATCTAAAGTCACGCATTGTCACAGGAACTGCACAGAATGGGCCCCCAATGTATATTTTGACGGTGATAATGCAATAAATCTTGAAGCTGAAATAAGTAGAAGTCGAAGAATCAAATGTAGTTTTTGTGGACTAAAAGGGGCCGCACTTGGTTGTTATGAGAAAAGCTGTCGCAGGAGCTTTCATGTTCCGTGTGCCAACTGGACTTCTCAATGTCGATGGGATACGCAAAACTTTGTCATGTTATGCCCTCTGCATGCTTCCTCCATGTTGCCCTGTGAAGGTTCAGGATCCCAAAAAAGGAGCAAGAAATGCGCAGCTAGCGAGGGTAAAAACCATGGTCTTAAACATGACACTACAAACCAAAGTCGGGCTGCTCATAGATCATACAAGAAAATTGTACTATGTTGTTCTGCTCTATCCGTACAGGAGAGGGAAGTTGTTTCCGAATTTGAACGAGTATCGAAAGCTGCAGTTTTGAAAAATTGGGACTCGAGTGTCACCCATGTTATAGCATCAACGGATGAAAATGGGGCATGCAGAAGGACCCTCAAAGTATTGTTGGGTATCCTGGAGGGAAAGTGGATTCTCAATATTGAGTGGATTAAAGCTTGCATGAAAGAAATGGGTCCTGTTGATGAGGAGCGATATGAAATTAATGTCGACATCCATGGAATTAGAGATGGTCCTCGTCTTGGACGACTAAGAGTATTGAACAAGCAACCAAAGCTTTTTTATGGCTACAAGTTTTATGTTATGGGAGATTTTATACCTTCGTACAAGGGGTATCTGCAAGACCTTTTGGTTGCTGCTGGAGGGATAATTCTGCACAGAAAACCAGTGTCTGGTGACCAAGAATCAACATCACCAGATACGCATCCATACCAAACCCTTATAATTTACAGCCTCGAGCTTCCTGATAAATGCAAGCCTTTGAAAAAGGATACAATTTGCAGCCAAAGGCGTCATGATGCGGAGGTTCTGGCAAGTTCTACAGGTTCAAAGGTAGCAAGTAATACATGGATTCTGAATTCAATTGCAGCCTGCAAACTGAAATGCCTTGCTCAATGA
Predicted protein sequences of Glyma.15g092000
>Glyma.15g092000.5.p sequence-type=predicted peptide transcript=Glyma.15g092000.5 locus=Glyma.15g092000 id=Glyma.15g092000.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDLERMARELICPICWSLLDSAVSLTCNHLFCNSCVFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYKNMEAASGVNIFETQNAPVTNLSDGEKQCEVDANSGKMEAGGTHTGRPREKKTRKKKESKKTVQASMESSGSDFAKPSFPAKKRVQVPQNLLSETPMKSLKIGVSLSEINKEKEGTEKVPVMESERPLQREKDNPVLSPFFWLREEKDGERLSQQTDDDEIIDGSTPNPPSFSDLKDSDDEIPSNVAPMDEVQNKGSVNLFDSEMFEWTQRPCTPELFSSPSKMQLQVMDTYEDDENQEELVASSLELAENQPRVDAGNMKFDNPKEGNIMADVLPPSVSPQIRSSDDLNGMKKSTKRRRKGRDKNKQEHIGEPKNSIDEMHVDSYISLEVTQEQALDKSSNPRKDSRRDKRVCFNTSTIPTPITACTVPNTLGVQSIGEMKKAKNTDISPLKQENEKHHAQEISGKSRMKRSGKQNVSQTNEFAGSDSSIFSLQTDNNGKDSNSRQCKSKYSRKSMSCSKELKATKRQKLSSDCISKTKNVEEILPIESIHQGPDVRDLNDTSKEKHCPLMDQTALRKCESHVTKYQCIFCLSSEESETSGPMVHYLDGRPVTADYEGGSKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCANWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCAASEGKNHGLKHDTTNQSRAAHRSYKKIVLCCSALSVQEREVVSEFERVSKAAVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPVDEERYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYVMGDFIPSYKGYLQDLLVAAGGIILHRKPVSGDQESTSPDTHPYQTLIIYSLELPDKCKPLKKDTICSQRRHDAEVLASSTGSKVASNTWILNSIAACKLKCLAQ*

>Glyma.15g092000.6.p sequence-type=predicted peptide transcript=Glyma.15g092000.6 locus=Glyma.15g092000 id=Glyma.15g092000.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDLERMARELICPICWSLLDSAVSLTCNHLFCNSCVFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYKNMEAASGVNIFETQNAPVTNLSDGEKQCEVDANSGKMEAGGTHTGRPREKKTRKKKESKKTVQASMESSGSDFAKPSFPAKKRVQVPQNLLSETPMKSLKIGVSLSEINKEKEGTEKVPVMESERPLQREKDNPVLSPFFWLREEKDGERLSQQTDDDEIIDGSTPNPPSFSDLKDSDDEIPSNVAPMDEVQNKGSVNLFDSEMFEWTQRPCTPELFSSPSKMQVMDTYEDDENQEELVASSLELAENQPRVDAGNMKFDNPKEGNIMADVLPPSVSPQIRSSDDLNGMKKSTKRRRKGRDKNKQEHIGEPKNSIDEMHVDSYISLEVTQEQALDKSSNPRKDSRRDKRVCFNTSTIPTPITACTVPNTLGVQSIGEMKKAKNTDISPLKQENEKHHAQEISGKSRMKRSGKQNVSQTNEFAGSDSSIFSLQTDNNGKDSNSRQCKSKYSRKSMSCSKELKATKRQKLSSDCISKTKNVEEILPIESIHQGPDVRDLNDTSKEKHCPLMDQTALRKCESHVTKYQCIFCLSSEESETSGPMVHYLDGRPVTADYEGGSKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCANWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCAASEGKNHGLKHDTTNQSRAAHRSYKKIVLCCSALSVQEREVVSEFERVSKAAVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPVDEERYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYVMGDFIPSYKGYLQDLLVAAGGIILHRKPVSGDQESTSPDTHPYQTLIIYSLELPDKCKPLKKDTICSQRRHDAEVLASSTGSKVASNTWILNSIAACKLKCLAQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo