SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.15g082800

Feature Type:gene_model
Chromosome:Gm15
Start:6304905
stop:6313267
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.15g082800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G42610.1AT LSH10 JGI N/AIEA
PTHR31165PantherFam PROTEIN G1-LIKE2 JGI N/AIEA
PTHR31165:SF8PantherFam PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 JGI N/AIEA
PF04852Pfam Protein of unknown function (DUF640) JGI N/AIEA

Gene model name correspondences to Glyma.15g082800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g08880 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g082800
>Glyma.15g082800.1 sequence-type=CDS polypeptide=Glyma.15g082800.1.p locus=Glyma.15g082800 id=Glyma.15g082800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCGGCGAAATGCATACCGATTCCGCCTCCTCGTCACGAGCCGCCGCAACCTCCGATCAGCGTCATCAGCAGCCGGCGGCGGCCCCTCTGAGCCGATACGAATCCCAGAAACGGCGAGACTGGAACACCTTCGGCCAGTACTTGAAGAACCAGACACCCCCAGTTTCGCTGTCACAGTGCAACTTCAACCACGTGCTTGAGTTCCTTCGCTACCTTGACCAATTTGGGAAGACCAAGGTCCACTTGCACGGTTGCATCTTTTTTGGGCAGCCTGACCCGCCCGCACCCTGCACCTGTCCTCTCAGACAGGCTTGGGGGAGTCTTGATGCTCTCATCGGACGGCTTAGGGCTGCCTATGAAGAGCACGGAGGCTCCGCCGAAACTAATCCCTTTGGAAGTGGAGCTATTCGCGTGTACCTTCGCGAAGTCAAGGAGTGTCAAGCAAAGGCCAGAGGGATCCCATACACCAAGAAAAAGAAGAAGAAGAACCAACTTAAGGGCCCTCATGATGCTCCAAAGTCCTTCAAGCAATTGGCCACTTGA
Predicted protein sequences of Glyma.15g082800
>Glyma.15g082800.1.p sequence-type=predicted peptide transcript=Glyma.15g082800.1 locus=Glyma.15g082800 id=Glyma.15g082800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGEMHTDSASSSRAAATSDQRHQQPAAAPLSRYESQKRRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSAETNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKKNQLKGPHDAPKSFKQLAT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo