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Report for Sequence Feature Glyma.15g068700

Feature Type:gene_model
Chromosome:Gm15
Start:5226328
stop:5232403
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g068700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G47670.1AT Transmembrane amino acid transporter family protein JGI N/AIEA
GO:0003333GO-bp amino acid transmembrane transport EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0015171GO-mf amino acid transmembrane transporter activity EnsemblGenomesN/AIEA
KOG1303 KOG Amino acid transporters JGI N/AIEA
PTHR22950Panther AMINO ACID TRANSPORTER JGI N/AIEA
PF01490PFAM Transmembrane amino acid transporter protein JGI N/AIEA

Expression Patterns of Glyma.15g068700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.15g068700
ParalogEvidenceComments
Glyma.13g245000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15g068700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g07440 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.15g068700
>Glyma.15g068700.2 sequence-type=transcript locus=Glyma.15g068700 ID=Glyma.15g068700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCATTTCCTTTCGGCTACTGTGTCCCCACCAACACAACACAACACACACTGTGCTACTATGCCTGTCTCTGCAACCCAGTGAAAGTGAGAGTGAGAGACAGACACATGAAAGAAGGACTCTTTTTCTTTTTTCCTCAAACAAAGTAAACAAAGTCGTAAACAACATTATGGTTTCTCGTACCAACGTCATTTTTCTCTTTTATTTATTTATTATATAGCCGCACTTCGAGAAAGACAATGTAATACACCATCAATACCTAGTTCCAAAGAAAGTTTTACAAATTAAAAAAGGATGTTATAGAAAGATTACTTGAGTGAAGAAGAACTCAATCACTCTGAGTTGTTGTTCATAAAGAAGACTGCGTTTGTGATATTTTCTCCTACCATGTCTGGCTTTCTTTGAACTTTCACTCGCAGCTTCTTATTCTTGTGATCTAAGTTCCTCTACTCTCATTCCAAGCGTGGGTGTATATCAAGGTGGAGTGATATAAAATGGAGGAGAGACCAGAAACAGAACTGATATCTATACCGGCGACACCAAGGGTGTCAACCCCGGAGATACTGACACCGGGGCAGAGGTCACCAAGAGCAGCATCAAAGGAAGGAAAATCATGGACCCCAACTTCTTTTATATCACCAAGGTTTCTGAGTCCAATAGGGACGCCAATGAAGAGAGTGCTTGTAAACATGAAGGGTTACTTGGAGGAAGTGGGACACCTTACCAAACTCAACCCTCAAGATGCTTGGCTTCCCATCACCGAGTCTCGCAATGGAAATGCTCACTATGCTGCATTTCACAACCTCAATGCTGGTGTTGGCTTTCAGGCCCTCGTTTTGCCCGTTGCTTTTGCTTATCTTGGCTGGAGTTGGGGAATTCTTTCCTTAACCATAGCATATTGTTGGCAACTTTACACGTTATGGATTCTGGTTCAGCTTCACGAAGCAGTTCCAGGTAAAAGATACAACAGATATGTGGAGCTAGCACAAGCAGCATTTGGGGAAAGATTAGGAGTCTGGCTTGCTCTCTTCCCAACTGTTTATTTGTCAGCAGGAACTGCAACAGCTTTGATTCTTATAGGAGGGGAGACCATGAAACTGTTCTTCCAAATAGTTTGTGGTCCCACTTGTACTTCAAATCCTTTAACCACAGTGGAATGGTACTTGGTTTTCACTTCTCTATCCATTGTCCTGTCTCAGCTTCCAAACCTCAATTCAATTGCAGGACTCTCACTCATCGGGGCAGTGACAGCCATAACTTACTCCACCATGGTTTGGGTACTCTCTGTAAGCCAACAAAGGCCACCCTCCATCTCCTATGAACCCCTATCTTTGGCACAACCTTCTGCTTCTGTATTTCTTGCCATGAATGCACTTGGAATTATAGCCTTTTCTTTCAGAGGCCACAATTTGGCCCTAGAAATTCAGTCCACAATGCCTTCAACTTTTAAGCACCCGGCTCGTGTGCCAATGTGGAAAGGAGCCAAGGttgcttatttcttcattgcaatgtgcctcttccctattgctattgGTGGCTTTTGGGCGTATGGCAACCAAATGCCTCCTGGAGGGATTCTCACTGCTTTGTATGCATTTCACAGTCATGACATCTCAAGAGGAATACTAGCCTTAGCTTTCCTTCTTGTTGTGTTCAACTGTTTGAGCAGTTTCCAGATATACTCAATGCCTGCTTTTGACAGTTTTGAAGCTGGTTACACCAGTAGGACAAACCGTCCCTGCTCCATATGGGTGAGATCAGGTTTTAGAGTCTTCTATGGATTTGTCTCCTTCTTCATAGGAGTGGCACTTCCCTTCCTCTCAAGTCTTGCTGGTTTGTTGGGAGGACTCACTCTTCCAGTCACTTTTGCATACCCTTGCTTCATGTGGGTTCTCATTAAGCAGCCACCAAAATATAGCTTCAATTGGTACTTCAATTGGATTCTGGGTTGGCTGGGGGTTGCTTTTAGCTTGGCCTTTTCCATTGGAGGTATTTGGAGCATTGTCAATGATGGGCTTAAACTTAAATTCTTCAAGCCCAATTGAATTTTTAATAATAGGCCATGCAAATGCACATGCACTATATGGTAATGCTACTCTTTAGGCGTTTCCCAATGGTCTAATAATATAGTTAGTGCATGTCTTCTTCCGCCCTAAGCTATCTTTGGTGGAAGATTTGGTTGTATTGTGAGAAGTGGTGGTAAAAGGAAAGCCAATAATTAATGAAGAGAATGATCCTTGTATGTCTAAGTGGAGACAGAGTTAGACCTTGCAAGTTACTAAAGTTTAAAGAGTATCTCTCCATGCCTTCACCGTTCCTCTTGTTGTGGTTCTCTTTTCACTGGGTGATATAGCTTGTTATGTTTAGAACATTTAATGGTTTGCTCTTATTCATTTTTGTAGAGACCTCCAGAACAACCCCCCCTCCCCCAACAAAAATCGTCAAACTCTTTCAAATTATTTGTACGTTGTAACCCGTGTGATTTCAAAAGTTAATTTCTCAGCGAATCCTCCTTTCAATTTTTCTCTCTCTCTCTGTACTG
Coding sequences of Glyma.15g068700
>Glyma.15g068700.1 sequence-type=CDS polypeptide=Glyma.15g068700.1.p locus=Glyma.15g068700 ID=Glyma.15g068700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGAGAGACCAGAAACAGAACTGATATCTATACCGGCGACACCAAGGGTGTCAACCCCGGAGATACTGACACCGGGGCAGAGGTCACCAAGAGCAGCATCAAAGGAAGGAAAATCATGGACCCCAACTTCTTTTATATCACCAAGGTTTCTGAGTCCAATAGGGACGCCAATGAAGAGAGTGCTTGTAAACATGAAGGGTTACTTGGAGGAAGTGGGACACCTTACCAAACTCAACCCTCAAGATGCTTGGCTTCCCATCACCGAGTCTCGCAATGGAAATGCTCACTATGCTGCATTTCACAACCTCAATGCTGGTGTTGGCTTTCAGGCCCTCGTTTTGCCCGTTGCTTTTGCTTATCTTGGCTGGAGTTGGGGAATTCTTTCCTTAACCATAGCATATTGTTGGCAACTTTACACGTTATGGATTCTGGTTCAGCTTCACGAAGCAGTTCCAGGTAAAAGATACAACAGATATGTGGAGCTAGCACAAGCAGCATTTGGGGAAAGATTAGGAGTCTGGCTTGCTCTCTTCCCAACTGTTTATTTGTCAGCAGGAACTGCAACAGCTTTGATTCTTATAGGAGGGGAGACCATGAAACTGTTCTTCCAAATAGTTTGTGGTCCCACTTGTACTTCAAATCCTTTAACCACAGTGGAATGGTACTTGGTTTTCACTTCTCTATCCATTGTCCTGTCTCAGCTTCCAAACCTCAATTCAATTGCAGGACTCTCACTCATCGGGGCAGTGACAGCCATAACTTACTCCACCATGGTTTGGGTACTCTCTGTAAGCCAACAAAGGCCACCCTCCATCTCCTATGAACCCCTATCTTTGGCACAACCTTCTGCTTCTGTATTTCTTGCCATGAATGCACTTGGAATTATAGCCTTTTCTTTCAGAGGCCACAATTTGGCCCTAGAAATTCAGTCCACAATGCCTTCAACTTTTAAGCACCCGGCTCGTGTGCCAATGTGGAAAGGAGCCAAGGTTGCTTATTTCTTCATTGCAATGTGCCTCTTCCCTATTGCTATTGGTGGCTTTTGGGCGTATGGCAACCAAATGCCTCCTGGAGGGATTCTCACTGCTTTGTATGCATTTCACAGTCATGACATCTCAAGAGGAATACTAGCCTTAGCTTTCCTTCTTGTTGTGTTCAACTGTTTGAGCAGTTTCCAGATATACTCAATGCCTGCTTTTGACAGTTTTGAAGCTGGTTACACCAGTAGGACAAACCGTCCCTGCTCCATATGGGTGAGATCAGGTTTTAGAGTCTTCTATGGATTTGTCTCCTTCTTCATAGGAGTGGCACTTCCCTTCCTCTCAAGTCTTGCTGGTTTGTTGGGAGGACTCACTCTTCCAGTCACTTTTGCATACCCTTGCTTCATGTGGGTTCTCATTAAGCAGCCACCAAAATATAGCTTCAATTGGTACTTCAATTGGATTCTGGGTTGGCTGGGGGTTGCTTTTAGCTTGGCCTTTTCCATTGGAGGTATTTGGAGCATTGTCAATGATGGGCTTAAACTTAAATTCTTCAAGCCCAATTGA

>Glyma.15g068700.2 sequence-type=CDS polypeptide=Glyma.15g068700.2.p locus=Glyma.15g068700 ID=Glyma.15g068700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGAGAGACCAGAAACAGAACTGATATCTATACCGGCGACACCAAGGGTGTCAACCCCGGAGATACTGACACCGGGGCAGAGGTCACCAAGAGCAGCATCAAAGGAAGGAAAATCATGGACCCCAACTTCTTTTATATCACCAAGGTTTCTGAGTCCAATAGGGACGCCAATGAAGAGAGTGCTTGTAAACATGAAGGGTTACTTGGAGGAAGTGGGACACCTTACCAAACTCAACCCTCAAGATGCTTGGCTTCCCATCACCGAGTCTCGCAATGGAAATGCTCACTATGCTGCATTTCACAACCTCAATGCTGGTGTTGGCTTTCAGGCCCTCGTTTTGCCCGTTGCTTTTGCTTATCTTGGCTGGAGTTGGGGAATTCTTTCCTTAACCATAGCATATTGTTGGCAACTTTACACGTTATGGATTCTGGTTCAGCTTCACGAAGCAGTTCCAGGTAAAAGATACAACAGATATGTGGAGCTAGCACAAGCAGCATTTGGGGAAAGATTAGGAGTCTGGCTTGCTCTCTTCCCAACTGTTTATTTGTCAGCAGGAACTGCAACAGCTTTGATTCTTATAGGAGGGGAGACCATGAAACTGTTCTTCCAAATAGTTTGTGGTCCCACTTGTACTTCAAATCCTTTAACCACAGTGGAATGGTACTTGGTTTTCACTTCTCTATCCATTGTCCTGTCTCAGCTTCCAAACCTCAATTCAATTGCAGGACTCTCACTCATCGGGGCAGTGACAGCCATAACTTACTCCACCATGGTTTGGGTACTCTCTGTAAGCCAACAAAGGCCACCCTCCATCTCCTATGAACCCCTATCTTTGGCACAACCTTCTGCTTCTGTATTTCTTGCCATGAATGCACTTGGAATTATAGCCTTTTCTTTCAGAGGCCACAATTTGGCCCTAGAAATTCAGTCCACAATGCCTTCAACTTTTAAGCACCCGGCTCGTGTGCCAATGTGGAAAGGAGCCAAGGTTGCTTATTTCTTCATTGCAATGTGCCTCTTCCCTATTGCTATTGGTGGCTTTTGGGCGTATGGCAACCAAATGCCTCCTGGAGGGATTCTCACTGCTTTGTATGCATTTCACAGTCATGACATCTCAAGAGGAATACTAGCCTTAGCTTTCCTTCTTGTTGTGTTCAACTGTTTGAGCAGTTTCCAGATATACTCAATGCCTGCTTTTGACAGTTTTGAAGCTGGTTACACCAGTAGGACAAACCGTCCCTGCTCCATATGGGTGAGATCAGGTTTTAGAGTCTTCTATGGATTTGTCTCCTTCTTCATAGGAGTGGCACTTCCCTTCCTCTCAAGTCTTGCTGGTTTGTTGGGAGGACTCACTCTTCCAGTCACTTTTGCATACCCTTGCTTCATGTGGGTTCTCATTAAGCAGCCACCAAAATATAGCTTCAATTGGTACTTCAATTGGATTCTGGGTTGGCTGGGGGTTGCTTTTAGCTTGGCCTTTTCCATTGGAGGTATTTGGAGCATTGTCAATGATGGGCTTAAACTTAAATTCTTCAAGCCCAATTGA
Predicted protein sequences of Glyma.15g068700
>Glyma.15g068700.1.p sequence-type=predicted peptide transcript=Glyma.15g068700.1 locus=Glyma.15g068700 ID=Glyma.15g068700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEERPETELISIPATPRVSTPEILTPGQRSPRAASKEGKSWTPTSFISPRFLSPIGTPMKRVLVNMKGYLEEVGHLTKLNPQDAWLPITESRNGNAHYAAFHNLNAGVGFQALVLPVAFAYLGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFGERLGVWLALFPTVYLSAGTATALILIGGETMKLFFQIVCGPTCTSNPLTTVEWYLVFTSLSIVLSQLPNLNSIAGLSLIGAVTAITYSTMVWVLSVSQQRPPSISYEPLSLAQPSASVFLAMNALGIIAFSFRGHNLALEIQSTMPSTFKHPARVPMWKGAKVAYFFIAMCLFPIAIGGFWAYGNQMPPGGILTALYAFHSHDISRGILALAFLLVVFNCLSSFQIYSMPAFDSFEAGYTSRTNRPCSIWVRSGFRVFYGFVSFFIGVALPFLSSLAGLLGGLTLPVTFAYPCFMWVLIKQPPKYSFNWYFNWILGWLGVAFSLAFSIGGIWSIVNDGLKLKFFKPN*

>Glyma.15g068700.2.p sequence-type=predicted peptide transcript=Glyma.15g068700.2 locus=Glyma.15g068700 ID=Glyma.15g068700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEERPETELISIPATPRVSTPEILTPGQRSPRAASKEGKSWTPTSFISPRFLSPIGTPMKRVLVNMKGYLEEVGHLTKLNPQDAWLPITESRNGNAHYAAFHNLNAGVGFQALVLPVAFAYLGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFGERLGVWLALFPTVYLSAGTATALILIGGETMKLFFQIVCGPTCTSNPLTTVEWYLVFTSLSIVLSQLPNLNSIAGLSLIGAVTAITYSTMVWVLSVSQQRPPSISYEPLSLAQPSASVFLAMNALGIIAFSFRGHNLALEIQSTMPSTFKHPARVPMWKGAKVAYFFIAMCLFPIAIGGFWAYGNQMPPGGILTALYAFHSHDISRGILALAFLLVVFNCLSSFQIYSMPAFDSFEAGYTSRTNRPCSIWVRSGFRVFYGFVSFFIGVALPFLSSLAGLLGGLTLPVTFAYPCFMWVLIKQPPKYSFNWYFNWILGWLGVAFSLAFSIGGIWSIVNDGLKLKFFKPN*






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