Report for Sequence Feature Glyma.15g067100
Feature Type: gene_model
Chromosome: Gm15
Start: 5110237
stop: 5113474
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.15g067100
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G21450.1 AT
PapD-like superfamily protein
JGI N/A IEA
GO:0005789 GO-cc
endoplasmic reticulum membrane
EnsemblGenomes N/A IEA
GO:0005198 GO-mf
structural molecule activity
JGI N/A IEA
KOG0439
KOG
VAMP-associated protein involved in inositol metabolism
JGI N/A IEA
PTHR10809 Panther
VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN
JGI N/A IEA
PF00635 PFAM
MSP (Major sperm protein) domain
JGI N/A IEA
Expression Patterns of Glyma.15g067100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.15g067100
Paralog Evidence Comments
Glyma.13g246800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.15g067100 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma15g07260 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.15g067100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.15g067100.2 sequence-type=transcript locus=Glyma.15g067100 ID=Glyma.15g067100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTGTGGGACCCGACACTCAACCTTTTTGATAAACCAAAAACAAAACCTTTGTATTTTTCTTTACTATATATTTGTTCCATTCCGTGCGCGGTGAATGGTGATCTTATTGTATTTGAGACTTGAGTTGGAAGTCATGGCGATTGGTAATGAGAATCAGCCACAACAATCTGAAGGCAAAGTGTGGAATTTGTTCAAGCTTCCCTTTCGCCATTCAACTTCAACTCCTCACAATCACAATCAAGTTTCCACCTCCAATTCTGTTTCTTCCTTTGCCAAATCGCTCCTCCCCTCACCACGTCGTCTTAAGCTTGATCCTTCCAACAAGCTCTACTTCCCTTATGAGCCGGGCAAGCAGGGTAGGAGTGCCATCAGGATTAAAAACACCAGCAAATCCAACGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGTTGTTTCATGCGCCCTCCTGGGGGCATTCTGGCACCGGGCGAGAGTATAATTGCAACTGTGTTCAAGTTTATAGAACATCCATTGAATAATGAAAAGCCAGAAAAAACTGGACTCAAATTCAAAATCACGAGCTTGAAGGTCAAAGGACCAATTGATTATGTCCCTGAAATGTTTGATGAGCTGAAGGATCAAGTAACAGTGGAGCAGATTTTGCAGGTTGTTTTTCTTGATCCAGAGCGTAACTGTCCTGCTTTGGAAAAACTGAAGCTTCAGCTGGTTGAGGCTGATGCTGCTGTTGAGGCACGTAAGAGAGCCCCAGAAGATGCAGGTCCTAAGATTCTCGGAGAAGGGCTCGTCGTAGATGAATGGGTGAGTATGTTTACTTAGTTTTTTATTGGAAAAGTTTCCTTGTAAATTGTAATATGTCACTTTTTTGACAAATGCTTCACGTCTTCATCTA
Coding sequences of Glyma.15g067100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.15g067100.1 sequence-type=CDS polypeptide=Glyma.15g067100.1.p locus=Glyma.15g067100 ID=Glyma.15g067100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGATCTTATTGTATTTGAGACTTGAGTTGGAAGTCATGGCGATTGGTAATGAGAATCAGCCACAACAATCTGAAGGCAAAGTGTGGAATTTGTTCAAGCTTCCCTTTCGCCATTCAACTTCAACTCCTCACAATCACAATCAAGTTTCCACCTCCAATTCTGTTTCTTCCTTTGCCAAATCGCTCCTCCCCTCACCACGTCGTCTTAAGCTTGATCCTTCCAACAAGCTCTACTTCCCTTATGAGCCGGGCAAGCAGGGTAGGAGTGCCATCAGGATTAAAAACACCAGCAAATCCAACGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGTTGTTTCATGCGCCCTCCTGGGGGCATTCTGGCACCGGGCGAGAGTATAATTGCAACTGTGTTCAAGTTTATAGAACATCCATTGAATAATGAAAAGCCAGAAAAAACTGGACTCAAATTCAAAATCACGAGCTTGAAGGTCAAAGGACCAATTGATTATGTCCCTGAAATGTTTGATGAGCTGAAGGATCAAGTAACAGTGGAGCAGATTTTGCAGGTTGTTTTTCTTGATCCAGAGCGTAACTGTCCTGCTTTGGAAAAACTGAAGCTTCAGCTGGTTGAGGCTGATGCTGCTGTTGAGGCACGTAAGAGAGCCCCAGAAGATGCAGGTCCTAAGATTCTCGGAGAAGGGCTCGTCGTAGATGAATGGAAAGAGAGGAGGGAAAGATACCTGGCCAAACAGCAGGGTGAAGTGGTAGTGGACTCTATATAG
>Glyma.15g067100.2 sequence-type=CDS polypeptide=Glyma.15g067100.2.p locus=Glyma.15g067100 ID=Glyma.15g067100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGATCTTATTGTATTTGAGACTTGAGTTGGAAGTCATGGCGATTGGTAATGAGAATCAGCCACAACAATCTGAAGGCAAAGTGTGGAATTTGTTCAAGCTTCCCTTTCGCCATTCAACTTCAACTCCTCACAATCACAATCAAGTTTCCACCTCCAATTCTGTTTCTTCCTTTGCCAAATCGCTCCTCCCCTCACCACGTCGTCTTAAGCTTGATCCTTCCAACAAGCTCTACTTCCCTTATGAGCCGGGCAAGCAGGGTAGGAGTGCCATCAGGATTAAAAACACCAGCAAATCCAACGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGTTGTTTCATGCGCCCTCCTGGGGGCATTCTGGCACCGGGCGAGAGTATAATTGCAACTGTGTTCAAGTTTATAGAACATCCATTGAATAATGAAAAGCCAGAAAAAACTGGACTCAAATTCAAAATCACGAGCTTGAAGGTCAAAGGACCAATTGATTATGTCCCTGAAATGTTTGATGAGCTGAAGGATCAAGTAACAGTGGAGCAGATTTTGCAGGTTGTTTTTCTTGATCCAGAGCGTAACTGTCCTGCTTTGGAAAAACTGAAGCTTCAGCTGGTTGAGGCTGATGCTGCTGTTGAGGCACGTAAGAGAGCCCCAGAAGATGCAGGTCCTAAGATTCTCGGAGAAGGGCTCGTCGTAGATGAATGGGTGAGTATGTTTACTTAG
Predicted protein sequences of Glyma.15g067100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.15g067100.1.p sequence-type=predicted peptide transcript=Glyma.15g067100.1 locus=Glyma.15g067100 ID=Glyma.15g067100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVILLYLRLELEVMAIGNENQPQQSEGKVWNLFKLPFRHSTSTPHNHNQVSTSNSVSSFAKSLLPSPRRLKLDPSNKLYFPYEPGKQGRSAIRIKNTSKSNVAFKFQTNAPKSCFMRPPGGILAPGESIIATVFKFIEHPLNNEKPEKTGLKFKITSLKVKGPIDYVPEMFDELKDQVTVEQILQVVFLDPERNCPALEKLKLQLVEADAAVEARKRAPEDAGPKILGEGLVVDEWKERRERYLAKQQGEVVVDSI*
>Glyma.15g067100.2.p sequence-type=predicted peptide transcript=Glyma.15g067100.2 locus=Glyma.15g067100 ID=Glyma.15g067100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVILLYLRLELEVMAIGNENQPQQSEGKVWNLFKLPFRHSTSTPHNHNQVSTSNSVSSFAKSLLPSPRRLKLDPSNKLYFPYEPGKQGRSAIRIKNTSKSNVAFKFQTNAPKSCFMRPPGGILAPGESIIATVFKFIEHPLNNEKPEKTGLKFKITSLKVKGPIDYVPEMFDELKDQVTVEQILQVVFLDPERNCPALEKLKLQLVEADAAVEARKRAPEDAGPKILGEGLVVDEWVSMFT*