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Report for Sequence Feature Glyma.15g057700

Feature Type:gene_model
Chromosome:Gm15
Start:4440424
stop:4444439
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g057700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G33580.1AT beta carbonic anhydrase 5 JGI N/AIEA
GO:0015976GO-bp carbon utilization EnsemblGenomesN/AIEA
GO:0004089GO-mf carbonate dehydratase activity EnsemblGenomesN/AIEA
GO:0004089GO-mf carbonate dehydratase activity JGI N/AIEA
GO:0008270GO-mf zinc ion binding EnsemblGenomesN/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
GO:0016829GO-mf lyase activity EnsemblGenomesN/AIEA
KOG1578 KOG Predicted carbonic anhydrase involved in protection against oxidative damage JGI N/AIEA
PTHR11002Panther CARBONIC ANHYDRASE JGI N/AIEA
PTHR11002:SF1Panther JGI N/AIEA
PF00484PFAM Carbonic anhydrase JGI N/AIEA
GN7V-54558SoyCyc9-rxn carbonate dehydratase Plant Metabolic Network ISS

Expression Patterns of Glyma.15g057700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.15g057700 not represented in the dataset
Glyma.15g057700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.15g057700
ParalogEvidenceComments
Glyma.13g257200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15g057700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g06280 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.15g057700
>Glyma.15g057700.2 sequence-type=transcript locus=Glyma.15g057700 ID=Glyma.15g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTCATGTCATGGGCAACTGGTGGTGGAGGTGTAAAGGAATAGCCTTTTTGTTGCCACCTTTACTTTTATTTAAACACTTGGTTTCTCCGTCTTTCTTGGAGACACACAACACACTCTCTCTCATGACTCCAACCAACTTACCCACCAACTAATCTTTTTAATTCCAAACCAAACCATGCCTCTTTTTTTCACTTCACAACTTTCATTTCAGTTTGAGTTCTCCAATGGCAGTTCCTGCACCATTCTCTCTTTCTTCTGATCCCTTTGCTTCCAAATCTGCCACATCAACGATCCTTGGTCCTGCCGTGCTGAAAATAGGGAACTTTGAGCAAACTCATTTCGGATTGTTCACGGCATTAAGGAGAAATCAAGGTTTCACTTTAAAGGCCTCAATGGGGCCTGCGGGATTTACAGAGAAACTTAACAACAACAGGCTAAAGACTTTAGCTGACGCTGAAGATGGGTGTGATATATTTAATGACCTGAAAGATAGGTTTTTAAGTTTTAAAAAGAATAAATACATGAAAAATATTGAACAGTTTGAAAATCTTGCAAAGGTTCAAACACCAAAGTTCATGGTTATTGCTTGTGCAGATTCTAGAGTATGCCCTTCTAATGTTTTGGGATTTCAACCAGGAGAAGCATTCATGATTCGCAATGTTGCTAATTTGGTTCCTACCTTTGAGAGTGGACCCTCAGAAACGAATGCAGCTCTAGAATTTGCTGTGAACTCCCTTCTGGTTGAGAACATCTTAGTCATTGGCCACAGTTGCTGTGGTGGTATACGTGCCCTGATGGGTATGCAAGATGATGATGTTGAAAGAAGTTTTATAAAAAGTTGGGTCATTGTTGGGAAGAATGCAAGAAAAAAAGCCAAGGCTGCTGCTTCTAATTTCAGCTTTGATGAGCAGTGCAAGCATTGTGAGAAGGAATCAATTAACCATTCCTTGTTAAACCTACTTACTTACCCCTGGATAGAAGAAAAGGTGGCAAATGGAGAACTCTCTATTCATGGTGGTTACTACGACTTTACCGACTGTTCATTTGAGAAGTGGACATTGGATTACCGGGGAACCAAATTGGAGGAAAATGGCAGCATTGCTACCAAAAACAAAATATTTTGGTGTTGAAGTTTGTACTTCTATTTTCCTGTGTAATGCATCGAGTTGCTTTTTCAAAATTTGGTAGGACTTTAAAAGCATAGGCTGAGTTATGTATTTTTGTAGAATTTATAAGATGTTTCAATCGATTGAGTTGAATAACCTCCTACCATTTCCCGTGTCTGTTGTATTATTGCTTTCTGAAAAAACGTTAAGGTACGGGCTTGATTATATACTGCTGATGCTAGCAGATAGGATTTCCCCCCTCCTTTTTTGGTGGAAATGGAACTATCTATGTCTTTTATGATTTCCTCTCAATTATTCTCT

>Glyma.15g057700.3 sequence-type=transcript locus=Glyma.15g057700 ID=Glyma.15g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAGCTAATTATTATTGTGAAACAGATCCTTGGTCCTGCCGTGCTGAAAATAGGGAACTTTGAGCAAACTCATTTCGGATTGTTCACGGCATTAAGGAGAAATCAAGGTTTCACTTTAAAGGCCTCAATGGGGCCTGCGGGATTTACAGAGAAACTTAACAACAACAGGCTAAAGACTTTAGCTGACGCTGAAGATGGGTGTGATATATTTAATGACCTGAAAGATAGGTTTTTAAGTTTTAAAAAGAATAAATACATGAAAAATATTGAACAGTTTGAAAATCTTGCAAAGGTTCAAACACCAAAGTTCATGGTTATTGCTTGTGCAGATTCTAGAGTATGCCCTTCTAATGTTTTGGGATTTCAACCAGGAGAAGCATTCATGATTCGCAATGTTGCTAATTTGGTTCCTACCTTTGAGAGTGGACCCTCAGAAACGAATGCAGCTCTAGAATTTGCTGTGAACTCCCTTCTGGTTGAGAACATCTTAGTCATTGGCCACAGTTGCTGTGGTGGTATACGTGCCCTGATGGGTATGCAAGATGATGATGTTGAAAGAAGTTTTATAAAAAGTTGGGTCATTGTTGGGAAGAATGCAAGAAAAAAAGCCAAGGCTGCTGCTTCTAATTTCAGCTTTGATGAGCAGTGCAAGCATTGTGAGAAGGAATCAATTAACCATTCCTTGTTAAACCTACTTACTTACCCCTGGATAGAAGAAAAGGTGGCAAATGGAGAACTCTCTATTCATGGTGGTTACTACGACTTTACCGACTGTTCATTTGAGAAGTGGACATTGGATTACCGGGGAACCAAATTGGAGGAAAATGGCAGCATTGCTACCAAAAACAAAATATTTTGGTGTTGAAGTTTGTACTTCTATTTTCCTGTGTAATGCATCGAGTTGCTTTTTCAAAATTTGGTAGGACTTTAAAAGCATAGGCTGAGTTATGTATTTTTGTAGAATTTATAAGATGTTTCAATCGATTGAGTTGAATAACCTCCTACCATTTCCCGTGTCTGTTGTATTATTGCTTTCTGAAAAAACGTTAAGGTACGGGCTTGATTATATACTGCTGATGCTAGCAGATAGGATTTCCCCCCTCCTTTTTTGGTGGAAATGGAACTATCTATGTCTTTTATGATTTCCTCTCAATTATTCTCT
Coding sequences of Glyma.15g057700
>Glyma.15g057700.1 sequence-type=CDS polypeptide=Glyma.15g057700.1.p locus=Glyma.15g057700 ID=Glyma.15g057700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGTTCCTGCACCATTCTCTCTTTCTTCTGATCCCTTTGCTTCCAAATCTGCCACATCAACGATCCTTGGTCCTGCCGTGCTGAAAATAGGGAACTTTGAGCAAACTCATTTCGGATTGTTCACGGCATTAAGGAGAAATCAAGGTTTCACTTTAAAGGCCTCAATGGGGCCTGCGGGATTTACAGAGAAACTTAACAACAACAGGCTAAAGACTTTAGCTGACGCTGAAGATGGGTGTGATATATTTAATGACCTGAAAGATAGGTTTTTAAGTTTTAAAAAGAATAAATACATGAAAAATATTGAACAGTTTGAAAATCTTGCAAAGGTTCAAACACCAAAGTTCATGGTTATTGCTTGTGCAGATTCTAGAGTATGCCCTTCTAATGTTTTGGGATTTCAACCAGGAGAAGCATTCATGATTCGCAATGTTGCTAATTTGGTTCCTACCTTTGAGAGTGGACCCTCAGAAACGAATGCAGCTCTAGAATTTGCTGTGAACTCCCTTCTGGTTGAGAACATCTTAGTCATTGGCCACAGTTGCTGTGGTGGTATACGTGCCCTGATGGGTATGCAAGATGATGATGTTGAAAGAAGTAGTTTTATAAAAAGTTGGGTCATTGTTGGGAAGAATGCAAGAAAAAAAGCCAAGGCTGCTGCTTCTAATTTCAGCTTTGATGAGCAGTGCAAGCATTGTGAGAAGGAATCAATTAACCATTCCTTGTTAAACCTACTTACTTACCCCTGGATAGAAGAAAAGGTGGCAAATGGAGAACTCTCTATTCATGGTGGTTACTACGACTTTACCGACTGTTCATTTGAGAAGTGGACATTGGATTACCGGGGAACCAAATTGGAGGAAAATGGCAGCATTGCTACCAAAAACAAAATATTTTGGTGTTGA

>Glyma.15g057700.2 sequence-type=CDS polypeptide=Glyma.15g057700.2.p locus=Glyma.15g057700 ID=Glyma.15g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGTTCCTGCACCATTCTCTCTTTCTTCTGATCCCTTTGCTTCCAAATCTGCCACATCAACGATCCTTGGTCCTGCCGTGCTGAAAATAGGGAACTTTGAGCAAACTCATTTCGGATTGTTCACGGCATTAAGGAGAAATCAAGGTTTCACTTTAAAGGCCTCAATGGGGCCTGCGGGATTTACAGAGAAACTTAACAACAACAGGCTAAAGACTTTAGCTGACGCTGAAGATGGGTGTGATATATTTAATGACCTGAAAGATAGGTTTTTAAGTTTTAAAAAGAATAAATACATGAAAAATATTGAACAGTTTGAAAATCTTGCAAAGGTTCAAACACCAAAGTTCATGGTTATTGCTTGTGCAGATTCTAGAGTATGCCCTTCTAATGTTTTGGGATTTCAACCAGGAGAAGCATTCATGATTCGCAATGTTGCTAATTTGGTTCCTACCTTTGAGAGTGGACCCTCAGAAACGAATGCAGCTCTAGAATTTGCTGTGAACTCCCTTCTGGTTGAGAACATCTTAGTCATTGGCCACAGTTGCTGTGGTGGTATACGTGCCCTGATGGGTATGCAAGATGATGATGTTGAAAGAAGTTTTATAAAAAGTTGGGTCATTGTTGGGAAGAATGCAAGAAAAAAAGCCAAGGCTGCTGCTTCTAATTTCAGCTTTGATGAGCAGTGCAAGCATTGTGAGAAGGAATCAATTAACCATTCCTTGTTAAACCTACTTACTTACCCCTGGATAGAAGAAAAGGTGGCAAATGGAGAACTCTCTATTCATGGTGGTTACTACGACTTTACCGACTGTTCATTTGAGAAGTGGACATTGGATTACCGGGGAACCAAATTGGAGGAAAATGGCAGCATTGCTACCAAAAACAAAATATTTTGGTGTTGA

>Glyma.15g057700.3 sequence-type=CDS polypeptide=Glyma.15g057700.3.p locus=Glyma.15g057700 ID=Glyma.15g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGCCTGCGGGATTTACAGAGAAACTTAACAACAACAGGCTAAAGACTTTAGCTGACGCTGAAGATGGGTGTGATATATTTAATGACCTGAAAGATAGGTTTTTAAGTTTTAAAAAGAATAAATACATGAAAAATATTGAACAGTTTGAAAATCTTGCAAAGGTTCAAACACCAAAGTTCATGGTTATTGCTTGTGCAGATTCTAGAGTATGCCCTTCTAATGTTTTGGGATTTCAACCAGGAGAAGCATTCATGATTCGCAATGTTGCTAATTTGGTTCCTACCTTTGAGAGTGGACCCTCAGAAACGAATGCAGCTCTAGAATTTGCTGTGAACTCCCTTCTGGTTGAGAACATCTTAGTCATTGGCCACAGTTGCTGTGGTGGTATACGTGCCCTGATGGGTATGCAAGATGATGATGTTGAAAGAAGTTTTATAAAAAGTTGGGTCATTGTTGGGAAGAATGCAAGAAAAAAAGCCAAGGCTGCTGCTTCTAATTTCAGCTTTGATGAGCAGTGCAAGCATTGTGAGAAGGAATCAATTAACCATTCCTTGTTAAACCTACTTACTTACCCCTGGATAGAAGAAAAGGTGGCAAATGGAGAACTCTCTATTCATGGTGGTTACTACGACTTTACCGACTGTTCATTTGAGAAGTGGACATTGGATTACCGGGGAACCAAATTGGAGGAAAATGGCAGCATTGCTACCAAAAACAAAATATTTTGGTGTTGA
Predicted protein sequences of Glyma.15g057700
>Glyma.15g057700.1.p sequence-type=predicted peptide transcript=Glyma.15g057700.1 locus=Glyma.15g057700 ID=Glyma.15g057700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVPAPFSLSSDPFASKSATSTILGPAVLKIGNFEQTHFGLFTALRRNQGFTLKASMGPAGFTEKLNNNRLKTLADAEDGCDIFNDLKDRFLSFKKNKYMKNIEQFENLAKVQTPKFMVIACADSRVCPSNVLGFQPGEAFMIRNVANLVPTFESGPSETNAALEFAVNSLLVENILVIGHSCCGGIRALMGMQDDDVERSSFIKSWVIVGKNARKKAKAAASNFSFDEQCKHCEKESINHSLLNLLTYPWIEEKVANGELSIHGGYYDFTDCSFEKWTLDYRGTKLEENGSIATKNKIFWC*

>Glyma.15g057700.2.p sequence-type=predicted peptide transcript=Glyma.15g057700.2 locus=Glyma.15g057700 ID=Glyma.15g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVPAPFSLSSDPFASKSATSTILGPAVLKIGNFEQTHFGLFTALRRNQGFTLKASMGPAGFTEKLNNNRLKTLADAEDGCDIFNDLKDRFLSFKKNKYMKNIEQFENLAKVQTPKFMVIACADSRVCPSNVLGFQPGEAFMIRNVANLVPTFESGPSETNAALEFAVNSLLVENILVIGHSCCGGIRALMGMQDDDVERSFIKSWVIVGKNARKKAKAAASNFSFDEQCKHCEKESINHSLLNLLTYPWIEEKVANGELSIHGGYYDFTDCSFEKWTLDYRGTKLEENGSIATKNKIFWC*

>Glyma.15g057700.3.p sequence-type=predicted peptide transcript=Glyma.15g057700.3 locus=Glyma.15g057700 ID=Glyma.15g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGPAGFTEKLNNNRLKTLADAEDGCDIFNDLKDRFLSFKKNKYMKNIEQFENLAKVQTPKFMVIACADSRVCPSNVLGFQPGEAFMIRNVANLVPTFESGPSETNAALEFAVNSLLVENILVIGHSCCGGIRALMGMQDDDVERSFIKSWVIVGKNARKKAKAAASNFSFDEQCKHCEKESINHSLLNLLTYPWIEEKVANGELSIHGGYYDFTDCSFEKWTLDYRGTKLEENGSIATKNKIFWC*






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