Glyma.15g050300

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Report for Sequence Feature Glyma.15g050300

Feature Type:	gene_model
Chromosome:	Gm15
Start:	3968865
stop:	3971243
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.15g050300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G26330.1	AT	cytochrome P450, family 71, subfamily B, polypeptide 37	JGI	N/A	IEA
GO:0044550	GO-bp	secondary metabolite biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0004497	GO-mf	monooxygenase activity	EnsemblGenomes	N/A	IEA
GO:0005506	GO-mf	iron ion binding	EnsemblGenomes	N/A	IEA
GO:0005506	GO-mf	iron ion binding	JGI	N/A	IEA
GO:0009055	GO-mf	electron carrier activity	JGI	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0016705	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	EnsemblGenomes	N/A	IEA
GO:0016705	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	JGI	N/A	IEA
GO:0016709	GO-mf	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	EnsemblGenomes	N/A	IEA
GO:0020037	GO-mf	heme binding	EnsemblGenomes	N/A	IEA
GO:0020037	GO-mf	heme binding	JGI	N/A	IEA
GO:0046872	GO-mf	metal ion binding	EnsemblGenomes	N/A	IEA
KOG0156	KOG	Cytochrome P450 CYP2 subfamily	JGI	N/A	IEA
PTHR24298	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24298:SF44	Panther		JGI	N/A	IEA
PF00067	PFAM	Cytochrome P450	JGI	N/A	IEA
GN7V-45241	SoyCyc9-rxn	(-)-vetispiradiene monooxygenase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.15g050300

Locus	Gene Symbol	Protein Name
	CYP71D10	cytochrome P450 CYP71D10

Expression Patterns of Glyma.15g050300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.15g050300

Paralog	Evidence	Comments
Glyma.08g182100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15g050300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma15g05580	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.15g050300

Limit To All Plant Sequences

>Glyma.15g050300.1 sequence-type=CDS polypeptide=Glyma.15g050300.1.p locus=Glyma.15g050300 ID=Glyma.15g050300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTCATGGAGCTTCACAACCACACCCCTTTCTCTATTTACTTCATTACCTCCATTCTCTTTATTTTCTTCGTGTTCTTCAAATTAGTTCAAAGATCGGATTCCAAAACCTCCTCTACCTGCAAATTGCCCCCAGGACCAAGGACACTACCTCTCATAGGGAACATACACCAGATTGTTGGCTCACTGCCGGTTCATTACTACTTAAAAAATTTGGCAGATAAGTATGGTCCATTAATGCATCTAAAACTAGGAGAGGTGTCCAACATCATAGTCACTTCCCCAGAAATGGCCCAAGAGATTATGAAGACACATGATCTCAACTTCTCTGATAGGCCAGACTTTGTATTGTCTAGAATAGTTTCTTACAACGGTTCTGGCATTGTCTTCAGTCAACATGGAGACTATTGGAGGCAACTAAGAAAGATATGCACAGTAGAGTTACTAACAGCAAAGCGCGTGCAGTCTTTTCGGTCCATAAGAGAAGAGGAGGTGGCAGAACTAGTTAAAAAAATAGCTGCAACTGCAAGTGAAGAAGGGGGGTCCATTTTTAATCTCACCCAGAGCATTTACTCAATGACTTTTGGGATAGCGGCACGAGCGGCTTTTGGTAAAAAGAGCAGATACCAACAAGTGTTCATATCAAACATGCATAAACAATTGATGCTTCTGGGAGGGTTTTCTGTTGCTGATCTCTATCCTTCTAGTAGAGTGTTTCAAATGATGGGGGCGACGGGGAAACTTGAAAAAGTGCATAGAGTGACAGATAGGGTGTTGCAAGACATCATCGACGAGCACAAAAATAGAAACAGAAGCAGCGAGGAGCGTGAAGCAGTGGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAAAAGGAATCGGAATTTCGCTTGACTGATGACAACATTAAAGCCGTCATCCAGGACATATTCATTGGTGGAGGCGAAACATCATCTTCTGTTGTGGAATGGGGGATGTCAGAATTGATAAGAAACCCGAGGGTGATGGAAGAAGCACAAGCAGAGGTGAGAAGAGTGTATGATAGCAAGGGATATGTGGATGAGACAGAATTGCACCAATTGATATACTTAAAGTCCATCATCAAAGAAACCATGAGGTTACATCCACCTGTGCCATTGTTAGTTCCTAGAGTAAGTAGAGAAAGGTGCCAAATCAATGGATATGAGATACCCTCTAAGACTAGGATCATTATCAATGCTTGGGCAATTGGAAGGAATCCTAAGTATTGGGGTGAAACTGAGAGTTTTAAACCTGAGAGGTTTCTTAATAGCTCCATTGATTTTAGGGGCACAGACTTTGAATTTATCCCATTTGGTGCTGGAAGGAGGATCTGCCCCGGCATTACATTTGCCATACCCAACATTGAGTTGCCACTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTTCCCAATAAAATGAAGAATGAAGAACTTGACATGACGGAGTCAAATGGAATTACTTTACGAAGACAAAATGACCTCTGCTTGATTCCCATTACTCGTCTACCTTAA

Predicted protein sequences of Glyma.15g050300

Limit To All Plant Sequences

>Glyma.15g050300.1.p sequence-type=predicted peptide transcript=Glyma.15g050300.1 locus=Glyma.15g050300 ID=Glyma.15g050300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVMELHNHTPFSIYFITSILFIFFVFFKLVQRSDSKTSSTCKLPPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFGKKSRYQQVFISNMHKQLMLLGGFSVADLYPSSRVFQMMGATGKLEKVHRVTDRVLQDIIDEHKNRNRSSEEREAVEDLVDVLLKFQKESEFRLTDDNIKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVMEEAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPITRLP*

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