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Report for Sequence Feature Glyma.15g033100

Feature Type:gene_model
Chromosome:Gm15
Start:2652481
stop:2654283
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.15g033100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13070.1AT MSF1-like family protein JGI N/AIEA
GO:0015914GO-bp phospholipid transport EnsemblGenomesN/AIEA
GO:0005758GO-cc mitochondrial intermembrane space EnsemblGenomesN/AIEA
GO:1990050GO-mf phosphatidic acid transporter activity EnsemblGenomesN/AIEA
KOG3336 KOG Predicted member of the intramitochondrial sorting protein family JGI N/AIEA
PTHR11158Panther MSF1/PX19 RELATED JGI N/AIEA
PTHR11158:SF18Panther JGI N/AIEA
PF04707PFAM PRELI-like family JGI N/AIEA

Expression Patterns of Glyma.15g033100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.15g033100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g03780 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.15g033100
>Glyma.15g033100.2 sequence-type=transcript locus=Glyma.15g033100 ID=Glyma.15g033100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTGGGTCAATAACAAACTTGGCCCAGCCCAATTGGGGAAAGGGTCTCGCTGAATGGCGTAATAGAAGTTTGGCCAAAACGCGAAATCTGTGACCGGAGGAGATACCAGTGGGCACTCCGAGGCAACTTCACACTCCTGTTAATCTTTCATCCTATCTTTGTATTGTTGAACCCTCGATTCTCTGCACATTCTTCGATTCAATTGCTCTTGTGAAATTCCTCCTTTATTAGCGGCTAAACCCTAAATCAGAACTTTGGTGTGGTGTGTTGACTTAATTGAGTGTAGAAATAGAATAATGGTGAAAGCATATACACAGGAACACGTCTACAAGCACCCTTGGGAACGTGTAACTTGTGCATCTTGGCGCAAGTTTGCTGACCAAGAGAACAAACGCATATTATCCCATATTCTTGATGTTGACACATTGAACCACAGCCTTGACCCTTCATCAGGGATGCTTTACACGACCCGTGCTATCACGATCCATTGTCCTGGGCCGTGGTTTGTCCGCAAGATTGTTGGTCAGGATATTTGCCACTGTGTGGAATCCACTGTGGTGGATGCACGGTCGCGCTCCATGCAACTAACCTCCCGGAATATCAGCCTCCAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATATGATCCTCACCCGGATAACCCGACTGGGTGGACAATTTGCCAGCAGGAGACTCGCATCCGGATTAAGCCGCTGTCGGCTTTGGCATCCATGGCTGAAAAGGTGGAGCAGCGATGTGCTGAAAAGTTCCTTCAGAATAGTGTCAAGGGTAGAGAGGTTATGGAGAGGATTTGTAAATATCTTGAAGCAGAATCAAGCAGCCTTGCCTTGTGATTCTATCTTTCTCATCTCAGTTTTGGGTTTATTTAGTTTAAATTGTTACATTTGTAAGATAACTGAGAAAACATTGCCACATCAAGCAAGACATGGAAGATGATGAAGCTTGTGTCTCTACCCTTGATGGTAAGAACACTATTTGGATCTTCTCTAAATTTTGAACTGGCAAATAATTTTTTAAATTGTTGTAACACAACTTAAAGAATCCTGTTGAATCTCCTTTTATCTGAATCTTGATCAGAGTGAGTTTGGGACCTAACACTGTTGTTCATGTTTGTCTCCTTTCCTAATCTTCCAAGGCGCACTTAATCAGAAGCTTTAGTTTTTATATGGATATCTTGAGGTAGAAGTGATTATCC

>Glyma.15g033100.3 sequence-type=transcript locus=Glyma.15g033100 ID=Glyma.15g033100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCTGAATGGCGTAATAGAAGTTTGGCCAAAACGCGAAATCTGTGACCGGAGGAGATACCAGTGGGCACTCCGAGGCAACTTCACACTCCTGTTAATCTTTCATCCTATCTTTGTATTGTTGAACCCTCGATTCTCTGCACATTCTTCGGAACACGTCTACAAGCACCCTTGGGAACGTGTAACTTGTGCATCTTGGCGCAAGTTTGCTGACCAAGAGAACAAACGCATATTATCCCATATTCTTGATGTTGACACATTGAACCACAGCCTTGACCCTTCATCAGGGATGCTTTACACGACCCGTGCTATCACGATCCATTGTCCTGGGCCGTGGTTTGTCCGCAAGATTGTTGGTCAGGATATTTGCCACTGTGTGGAATCCACTGTGGTGGATGCACGGTCGCGCTCCATGCAACTAACCTCCCGGAATATCAGCCTCCAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATATGATCCTCACCCGGATAACCCGACTGGGTGGACAATTTGCCAGCAGGAGACTCGCATCCGGATTAAGCCGCTGTCGGCTTTGGCATCCATGGCTGAAAAGGTGGAGCAGCGATGTGCTGAAAAGTTCCTTCAGAATAGTGTCAAGGGTAGAGAGGTTATGGAGAGGATTTGTAAATATCTTGAAGCAGAATCAAGCAGCCTTGCCTTGTGATTCTATCTTTCTCATCTCAGTTTTGGGTTTATTTAGTTTAAATTGTTACATTTGTAAGATAACTGAGAAAACATTGCCACATCAAGCAAGACATGGAAGATGATGAAGCTTGTGTCTCTACCCTTGATGGTAAGAACACTATTTGGATCTTCTCTAAATTTTGAACTGGCAAATAATTTTTTAAATTGTTGTAACACAACTTAAAGAATCCTGTTGAATCTCCTTTTATCTGAATCTTGATCAGAGTGAGTTTGGGACCTAACACTGTTGTTCATGTTTGTCTCCTTTC
Coding sequences of Glyma.15g033100
>Glyma.15g033100.1 sequence-type=CDS polypeptide=Glyma.15g033100.1.p locus=Glyma.15g033100 ID=Glyma.15g033100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGAAAGCATATACACAGGAACACGTCTACAAGCACCCTTGGGAACGTGTAACTTGTGCATCTTGGCGCAAGTTTGCTGACCAAGAGAACAAACGCATATTATCCCATATTCTTGATGTTGACACATTGAACCACAGCCTTGACCCTTCATCAGGGATGCTTTACACGACCCGTGCTATCACGATCCATTGTCCTGGGCCGTGGTTTGTCCGCAAGATTGTTGGTCAGGATATTTGCCACTGTGTGGAATCCACTGTGGTGGATGCACGGTCGCGCTCCATGCAACTAACCTCCCGGAATATCAGCCTCCAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATATGATCCTCACCCGGATAACCCGACTGGGTGGACAATTTGCCAGCAGGAGACTCGCATCCGGATTAAGCCGCTGTCGGCTTTGGCATCCATGGCTGAAAAGGTGGAGCAGCGATGTGCTGAAAAGTTCCTTCAGAATAGTGTCAAGGGTAGAGAGGTTATGGAGAGGATTTGTAAATATCTTGAAGCAGAATCAAGCAGCCTTGCCTTGTGA

>Glyma.15g033100.2 sequence-type=CDS polypeptide=Glyma.15g033100.2.p locus=Glyma.15g033100 ID=Glyma.15g033100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGAAAGCATATACACAGGAACACGTCTACAAGCACCCTTGGGAACGTGTAACTTGTGCATCTTGGCGCAAGTTTGCTGACCAAGAGAACAAACGCATATTATCCCATATTCTTGATGTTGACACATTGAACCACAGCCTTGACCCTTCATCAGGGATGCTTTACACGACCCGTGCTATCACGATCCATTGTCCTGGGCCGTGGTTTGTCCGCAAGATTGTTGGTCAGGATATTTGCCACTGTGTGGAATCCACTGTGGTGGATGCACGGTCGCGCTCCATGCAACTAACCTCCCGGAATATCAGCCTCCAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATATGATCCTCACCCGGATAACCCGACTGGGTGGACAATTTGCCAGCAGGAGACTCGCATCCGGATTAAGCCGCTGTCGGCTTTGGCATCCATGGCTGAAAAGGTGGAGCAGCGATGTGCTGAAAAGTTCCTTCAGAATAGTGTCAAGGGTAGAGAGGTTATGGAGAGGATTTGTAAATATCTTGAAGCAGAATCAAGCAGCCTTGCCTTGTGA

>Glyma.15g033100.3 sequence-type=CDS polypeptide=Glyma.15g033100.3.p locus=Glyma.15g033100 ID=Glyma.15g033100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTTACACGACCCGTGCTATCACGATCCATTGTCCTGGGCCGTGGTTTGTCCGCAAGATTGTTGGTCAGGATATTTGCCACTGTGTGGAATCCACTGTGGTGGATGCACGGTCGCGCTCCATGCAACTAACCTCCCGGAATATCAGCCTCCAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATATGATCCTCACCCGGATAACCCGACTGGGTGGACAATTTGCCAGCAGGAGACTCGCATCCGGATTAAGCCGCTGTCGGCTTTGGCATCCATGGCTGAAAAGGTGGAGCAGCGATGTGCTGAAAAGTTCCTTCAGAATAGTGTCAAGGGTAGAGAGGTTATGGAGAGGATTTGTAAATATCTTGAAGCAGAATCAAGCAGCCTTGCCTTGTGA
Predicted protein sequences of Glyma.15g033100
>Glyma.15g033100.1.p sequence-type=predicted peptide transcript=Glyma.15g033100.1 locus=Glyma.15g033100 ID=Glyma.15g033100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVKAYTQEHVYKHPWERVTCASWRKFADQENKRILSHILDVDTLNHSLDPSSGMLYTTRAITIHCPGPWFVRKIVGQDICHCVESTVVDARSRSMQLTSRNISLQKFIEVEEKIRYDPHPDNPTGWTICQQETRIRIKPLSALASMAEKVEQRCAEKFLQNSVKGREVMERICKYLEAESSSLAL*

>Glyma.15g033100.2.p sequence-type=predicted peptide transcript=Glyma.15g033100.2 locus=Glyma.15g033100 ID=Glyma.15g033100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVKAYTQEHVYKHPWERVTCASWRKFADQENKRILSHILDVDTLNHSLDPSSGMLYTTRAITIHCPGPWFVRKIVGQDICHCVESTVVDARSRSMQLTSRNISLQKFIEVEEKIRYDPHPDNPTGWTICQQETRIRIKPLSALASMAEKVEQRCAEKFLQNSVKGREVMERICKYLEAESSSLAL*

>Glyma.15g033100.3.p sequence-type=predicted peptide transcript=Glyma.15g033100.3 locus=Glyma.15g033100 ID=Glyma.15g033100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLYTTRAITIHCPGPWFVRKIVGQDICHCVESTVVDARSRSMQLTSRNISLQKFIEVEEKIRYDPHPDNPTGWTICQQETRIRIKPLSALASMAEKVEQRCAEKFLQNSVKGREVMERICKYLEAESSSLAL*






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