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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G43400.1 | AT | electron-transfer flavoprotein:ubiquinone oxidoreductase | JGI | N/A | IEA |
| GO:0006552 | GO-bp | leucine catabolic process | EnsemblGenomes | N/A | IEA |
| GO:0009646 | GO-bp | response to absence of light | EnsemblGenomes | N/A | IEA |
| GO:0022904 | GO-bp | respiratory electron transport chain | EnsemblGenomes | N/A | IEA |
| GO:0055114 | GO-bp | oxidation-reduction process | JGI | N/A | IEA |
| GO:0005739 | GO-cc | mitochondrion | EnsemblGenomes | N/A | IEA |
| GO:0017133 | GO-cc | mitochondrial electron transfer flavoprotein complex | EnsemblGenomes | N/A | IEA |
| GO:0031305 | GO-cc | integral component of mitochondrial inner membrane | EnsemblGenomes | N/A | IEA |
| GO:0004174 | GO-mf | electron-transferring-flavoprotein dehydrogenase activity | EnsemblGenomes | N/A | IEA |
| GO:0004174 | GO-mf | electron-transferring-flavoprotein dehydrogenase activity | JGI | N/A | IEA |
| GO:0009055 | GO-mf | electron transfer activity | EnsemblGenomes | N/A | IEA |
| GO:0043783 | GO-mf | oxidoreductase activity, oxidizing metal ions with flavin as acceptor | EnsemblGenomes | N/A | IEA |
| GO:0048039 | GO-mf | ubiquinone binding | EnsemblGenomes | N/A | IEA |
| GO:0051539 | GO-mf | 4 iron, 4 sulfur cluster binding | EnsemblGenomes | N/A | IEA |
| KOG2415 | KOG | Electron transfer flavoprotein ubiquinone oxidoreductase | JGI | N/A | IEA |
| PTHR10617 | Panther | ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE | JGI | N/A | IEA |
| PTHR10617:SF1 | Panther | JGI | N/A | IEA | |
| PF01946 | PFAM | Thi4 family | JGI | N/A | IEA |
| PF05187 | PFAM | Electron transfer flavoprotein-ubiquinone oxidoreductase | JGI | N/A | IEA |
| GN7V-43893 | SoyCyc9-rxn | electron-transferring-flavoprotein dehydrogenase | Plant Metabolic Network | ISS |
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Glyma.15g029200 not represented in the dataset |
Glyma.15g029200 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma15g03360 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.15g029200.1 sequence-type=CDS polypeptide=Glyma.15g029200.1.p locus=Glyma.15g029200 ID=Glyma.15g029200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATGCTCATGTTTCGCTCTATCGCGTCTAAATCCAAAACCAGCAACACTGCTCTTCTTCTTCTTCGTGCTATCGCTACATCCCAATCCCTTCACAGCAACATTACCAACCTCCACCCTCCCAATGCTAATAATTCTTATCATTCATTTTCTCGCCGCCATGCTTTTTCATTCTCTAAGCCACGCGCCAATTCTAGGGTTCCGACTTCTCAGAGCTTCTGCACCGCGTCCTCCGACAGGGACTCAATCGAGTACGACGTCGTCATCGTCGGCGCAGGTCCCGCCGGCTTATCGGCGGCGATACGGCTCAAGCAAATGTGCCGCGAACGAAACGCCGATTTGTCCGTCTGTGTCCTCGAGAAAGGTGCCGAAGTCGGTGCTCACATTCTTTCTGGAAACGTTTTTGAACCTCGCGCGCTAAATGAGCTTCTTCCGCAGTGGAAGGAGCAAGAGGCTCCGATCACTACTCCTGTTTCTTCTGATAAGTTTTGGTTTCTGACCAAAGGTCGCGCAATTTCGCTTCCGTCTCCTTTCAACAACAAAGGCAACTATGTAATAAGTCTAAGTCAGTTAGTACGTTGGTTGGGAGCAAAAGCTGAAGAGCTAGGAGTGGAAATATACCCAGGATTTGCTGCGAGTGAGGTATTGTATGATGCAAACAACAAAGTTATCGGTATCGGAACTAATGATATGGGAATTTCAAAAGATGGTTCAAAGAAGGAGAATTTTCAACATGGCGTCGAGATCAAAGGCCGCATAACACTCCTGGCTGAGGGATGTCGAGGATCATTGTCAGAGAAAATAATGAAAAAGTACAACCTAAGAGAGAAGGGAGGTTCTGAACATCAGACATATGCTTTGGGAATTAAAGAGGTTTGGGAAATTGATGAGAAAAAGCATCAACCTGGTGCTGTAATCCACACATTGGGATGGCCCTTGGATCATAAAACATACGGAGGATCTTTTCTGTATCACATGAAAGATAAACAAATATCTATAGGCCTTGTGGTTGCTTTAAACTATCAGAACCCTTTCATGAATCCTTATGAGGAATTCCAGAAACTAAAGCATCATCCTGCAATTAAATCATTTCTGGAAGGTGGAACAGTTATCCAGTATGGAGCTCGCACTTTAAATGAAGGTGGTTTTCAGTCTATCCCATATCCAGTTTTTCCTGGAGGAGCAATTATTGGATGTTCAGCTGGCTTCATGAATGTGCCAAAGATAAAGGGAACTCACACGGCAATGAAATCAGGAATGCTTGCAGCTGAAGTTACATTTGGTGCACTTAATGAAGGTCTAGATATGGATATGTATTGGGATGCTTTGAGAAATTCATGGATTTGGGAAGAATTGCATAAATCTCGGAACTACCGACCAGCCTTTGAATACGGGCTTATTCCAGGACTGGCCTTAAGTGGTCTGGAACATTACATATTCAAGGGGAGGCACCCAGTTACTTTGAAGCATGGTAAACCTGATCATGAGGCTATGAATGCTGCCAAATCACATTCTCCAATTCACTATCCAAAGGCTGACGGTGTCTTGTCCTTTGATGTGCCTACCTCCCTGCACAGGAGCAACACAAATCATGAACATGATCAACCTCCTCATCTTCGTTTGAGAGACCCAAAGATTCCTGAACTTGTAAATTTACCAGTGTATGCTGCACCTGAATCGCGATATTGTCCTGCCCGAGTATATGAGTATGTTGCAGATGAGCAGAATCAGATGAAGTTGCAAATTAATGCACAAAATTGCTTACATTGCAAGGCTTGTGATATCAAAGATCCAAAGCAAAATATTGAGTGGACAGTGCCTGAAGGGGGTGGAGGCCCAGGATACTCAGTCATGTAG
>Glyma.15g029200.1.p sequence-type=predicted peptide transcript=Glyma.15g029200.1 locus=Glyma.15g029200 ID=Glyma.15g029200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MMLMFRSIASKSKTSNTALLLLRAIATSQSLHSNITNLHPPNANNSYHSFSRRHAFSFSKPRANSRVPTSQSFCTASSDRDSIEYDVVIVGAGPAGLSAAIRLKQMCRERNADLSVCVLEKGAEVGAHILSGNVFEPRALNELLPQWKEQEAPITTPVSSDKFWFLTKGRAISLPSPFNNKGNYVISLSQLVRWLGAKAEELGVEIYPGFAASEVLYDANNKVIGIGTNDMGISKDGSKKENFQHGVEIKGRITLLAEGCRGSLSEKIMKKYNLREKGGSEHQTYALGIKEVWEIDEKKHQPGAVIHTLGWPLDHKTYGGSFLYHMKDKQISIGLVVALNYQNPFMNPYEEFQKLKHHPAIKSFLEGGTVIQYGARTLNEGGFQSIPYPVFPGGAIIGCSAGFMNVPKIKGTHTAMKSGMLAAEVTFGALNEGLDMDMYWDALRNSWIWEELHKSRNYRPAFEYGLIPGLALSGLEHYIFKGRHPVTLKHGKPDHEAMNAAKSHSPIHYPKADGVLSFDVPTSLHRSNTNHEHDQPPHLRLRDPKIPELVNLPVYAAPESRYCPARVYEYVADEQNQMKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYSVM*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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