SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.15g024400

Feature Type:gene_model
Chromosome:Gm15
Start:1962315
stop:1963810
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.15g024400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G17620.1AT JGI N/AIEA
PTHR31234PantherFam LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY JGI N/AIEA
PTHR31234:SF2PantherFam LEA_2 DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF03168Pfam Late embryogenesis abundant protein JGI N/AIEA

Proteins Associated with Glyma.15g024400
LocusGene SymbolProtein Name
LEA2-84 late embryogenesis abundant 2 gene 84

Gene model name correspondences to Glyma.15g024400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma15g02810 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.15g024400
>Glyma.15g024400.1 sequence-type=CDS polypeptide=Glyma.15g024400.1.p locus=Glyma.15g024400 id=Glyma.15g024400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACAGACAGGGTGTACCCATCCGCCAAGCCCGCCGTGGTTAACGGCGGCGCCGCCAACCCATCTTTCCCGGCGACGAAGGCTCAACTTTACGGCGCCACCCGCCCCACCTACCGCCCTCAACCCCACCACCGGCGCCGGAGCCGGCGACGGTGCTGCTGCACCTTCTTCTTCTGGCTGATCCTCACCGTGCTGATCCTCCTCCTCCTGATCGGCGTCGCCGGCACGGTGTTCTACCTCCTCTACCGCCCGCACCACCCCACCTTCACCGTCACGTCGCTGAAACTCTCCTACCTGAACCTCACCTCCTCCTCCAACACCCTGAACTCCCGCTTTGACATCACCGTCTCCGCCACGAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCTCCATCACCATCCTCTCCGGCGACATCGACGTCGGCGACGGAACCGTCCCCGGCTTCCAGCACCCGAAGAAGAACACCACGCTCATCAAAGCCTCCATCCTCAGCTCCGGCCACGCGCTCCAAAGCGACGAAGCTTCACGTTTGAAGTCCAGCATGAAGAGCAAGAACGGGTTGCCACTCAAAGTGAATTTGGAAACCAAAGTGAAGGCCAAGATGGGAAATTTGAAAACCCCAAAAGTGGGAATCAGAGTCTCCTGCGACGGAATCAGAGTCACTCTTCCCTCCGGCAAGAAACCGGCAACGGCGTCCACTTCCAACGCTAAGTGCGACGTCGATGTTCGGTTCAAGATCTGGAAGTGGACCATTTGA

>Glyma.15g024400.2 sequence-type=CDS polypeptide=Glyma.15g024400.2.p locus=Glyma.15g024400 id=Glyma.15g024400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACAGACAGGGTGTACCCATCCGCCAAGCCCGCCGTGGTTAACGGCGGCGCCGCCAACCCATCTTTCCCGGCGACGAAGGCTCAACTTTACGGCGCCACCCGCCCCACCTACCGCCCTCAACCCCACCACCGGCGCCGGAGCCGGCGACGGTGCTGCTGCACCTTCTTCTTCTGGCTGATCCTCACCGTGCTGATCCTCCTCCTCCTGATCGGCGTCGCCGGCACGGTGTTCTACCTCCTCTACCGCCCGCACCACCCCACCTTCACCGTCACGTCGCTGAAACTCTCCTACCTGAACCTCACCTCCTCCTCCAACACCCTGAACTCCCGCTTTGACATCACCGTCTCCGCCACGAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCTCCATCACCATCCTCTCCGGCGACATCGACGTCGGCGACGGAACCGTCCCCGGCTTCCAGCACCCGAAGAAGAACACCACGCTCATCAAAGCCTCCATCCTCAGCTCCGGCCACGCGCTCCAAAGCGACGAAGCTTCACGTTTGAAGTCCAGCATGAAGAGCAAGAACGGGTTGCCACTCAAAGTGAATTTGGAAACCAAAGTGAAGGCCAAGATGGGAAATTTGAAAACCCCAAAAGTGGGAATCAGAGTCTCCTGCGACGGAATCAGAGTCACTCTTCCCTCCGGCAAGAAACCGGCAACGGCGTCCACTTCCAACGCTAAGTGCGACGTCGATGTTCGGTTCAAGATCTGGAAGTGGACCATTTGA
Predicted protein sequences of Glyma.15g024400
>Glyma.15g024400.1.p sequence-type=predicted peptide transcript=Glyma.15g024400.1 locus=Glyma.15g024400 id=Glyma.15g024400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTDRVYPSAKPAVVNGGAANPSFPATKAQLYGATRPTYRPQPHHRRRSRRRCCCTFFFWLILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITVSATNPNKKILFAYDPTSITILSGDIDVGDGTVPGFQHPKKNTTLIKASILSSGHALQSDEASRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVTLPSGKKPATASTSNAKCDVDVRFKIWKWTI*

>Glyma.15g024400.2.p sequence-type=predicted peptide transcript=Glyma.15g024400.2 locus=Glyma.15g024400 id=Glyma.15g024400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTDRVYPSAKPAVVNGGAANPSFPATKAQLYGATRPTYRPQPHHRRRSRRRCCCTFFFWLILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITVSATNPNKKILFAYDPTSITILSGDIDVGDGTVPGFQHPKKNTTLIKASILSSGHALQSDEASRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVTLPSGKKPATASTSNAKCDVDVRFKIWKWTI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo