Glyma.15G078300

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Report for Sequence Feature Glyma.15G078300

Feature Type:	gene_model
Chromosome:	Gm15
Start:	6020602
stop:	6024367
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.15G078300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G28500.1	AT	NAC domain containing protein 73	JGI	N/A	IEA
GO:0006351	GO-bp	transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	JGI	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	JGI	N/A	IEA
PF02365	PFAM	No apical meristem (NAM) protein	JGI	N/A	IEA

Proteins Associated with Glyma.15G078300

Locus	Gene Symbol	Protein Name
	NAC114	NAC Transcription Factor gene 114

Expression Patterns of Glyma.15G078300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.15G078300

Paralog	Evidence	Comments
Glyma.13g234700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.15G078300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.15g078300	Wm82.a4.v1	ISS	As supplied by JGI
Glyma15g08480	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.15G078300

Limit To All Plant Sequences

>Glyma.15g078300.2 sequence-type=transcript locus=Glyma.15g078300 ID=Glyma.15g078300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCTAATGAACTCCCAACACGCGCAAAACACATATACACTCTAGAGTGGTGAAACGTCTTAAGAAGAATCAGGGAGGAGCTGATATTGAAGGAGGGTTTGGAAGAAAAAGAATTTTGTTTTGAGATATATATACATATATGTGCAAGTGCATAGGAAATTAACACAAAAAGATGACATGGTGCAATGACTCTGATGAGGATAGGGTTATTGAATCAACGACGCCAACAATAACTATTACTCCTAACACTGATGGCATAAAGCTCACCGAAGAAATTAGAACCATAACATGCCCCTCGTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAAAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGTGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCCTCAAAAGCATACACAACTGGAACGAGGAAAAGAAGAAAAGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCAGCCGGTGGTGCAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGACAAAAGAAGCCTGAGAAAACTAATTGGGTGATGCATCAATACCATCTTGGCAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGCAATCCCATTATAATAAAGGATTCATACGAAAAAATGTTGAATGATGGAAGTGGCCAAGACAACATTAATATATCATTAATACCTAAAACTACTGCAACTCTTTTGGATTGCTACACTGCTCCTTACATAGATTATGATCACGTCCATGTGAGTCATAACAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCGCTTAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGATTCTAGGCAGAGCAGCAATGACAAAGACTTGCATATAAATGTTCTCCATATTGTTTCCTTTACTAATTGATCAGTACGTAACATTATTTATATGTGGGATTAGAATGAAGGAATTTCAAGGGTTGGAAAAATAAGTTGGCTTCCTTATTAAGATCAATATGGTGCAGGCATGGTGGACTTAATTTCCCATAATTGACCCTGGTTGAAGTTGAGAGACAAGCAAGTTAGGTATATATATTTGCGGTACTGTAGTTTGATTTTAATTTTAGGGTACATGTATATTCGTAAAATGTGCTTATAGATATTACAATAGTAGCAGGGATATCGTTTATTGACTACTCTTCAGAACTATAGTCAGTCTATATACTGTATTTTGTCTAGAATTGAATTTTGCACCCCCTCAATCCTGAAAAAAATGCTGAGATGTTTCATTATTATTATATTATGCGTGTCAGCTACTTAATTTGCTGGGAAGTTTGTCCCTTGTAGTTTTCCCCCCTGTTTTCTTTGAAAGGTCGATTGTAAAATAAGGTGAAGACAGTAGATTTATCTTATTTATGGTTCTAAATTGCGGTT

>Glyma.15g078300.3 sequence-type=transcript locus=Glyma.15g078300 ID=Glyma.15g078300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CAAGACCCAGCCAGCCGTTAGGGAAATCAAGCACAGCTCAATCATTGAATCTTAGCATAAACACATACAGAAGAAGGAAAAGTGGCACCCTGGTACGATTAAATTCTCTCTCTTTCTGCAAATAGAGAAGTTGATTCAGAAGAAACGAGTCCCCAAAGAGACAAAGCTACTAGCTCTACCTTTCTTCACCCCTTTTCATCTCTATATTTTTATTTTTTTTTGTATTTTATTAGGGAGGAGCTGATATTGAAGGAGGGTTTGGAAGAAAAAGAATTTTGTTTTGAGATATATATACATATATGTGCAAGTGCATAGGAAATTAACACAAAAAGATGACATGGTGCAATGACTCTGATGAGGATAGGGTTATTGAATCAACGACGCCAACAATAACTATTACTCCTAACACTGATGGCATAAAGCTCACCGAAGAAATTAGAACCATAACATGCCCCTCGTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAAAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGTGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCCTCAAAAGCATACACAACTGGAACGAGGAAAAGAAGAAAAGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCAGCCGGTGGTGCAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGACAAAAGAAGCCTGAGAAAACTAATTGGGTGATGCATCAATACCATCTTGGCAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGCAATCCCATTATAATAAAGGATTCATACGAAAAAATGTTGAATGATGGAAGTGGCCAAGACAACATTAATATATCATTAATACCTAAAACTACTGCAACTCTTTTGGATTGCTACACTGCTCCTTACATAGATTATGATCACGTCCATGTGAGTCATAACAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCGCTTAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGATTCTAGGCAGAGCAGCAATGACAAAGACTTGCATATAAATGTTCTCCATATTGTTTCCTTTACTAATTGATCAGTACGTAACATTATTTATATGTGGGATTAGAATGAAGGAATTTCAAGGGTTGGAAAAATAAGTTGGCTTCCTTATTAAGATCAATATGGTGCAGGCATGGTGGACTTAATTTCCCATAATTGACCCTGGTTGAAGTTGAGAGACAAGCAAGTTAGGTATATATATTTGCGGTACTGTAGTTTGATTTTAATTTTAGGGTACATGTATATTCGTAAAATGTGCTTATAGATATTACAATAGTAGCAGGGATATCGTTTATTGACTACTCTTCAGAACTATAGTCAGTCTATATACTGTATTTTGTCTAGAATTGAATTTTGCACCCCCTCAATCCTGAAAAAAATGCTGAGATGTTTCATTATTATTATATTATGCGTGTCAGCTACTTAATTTGCTGGGAAGTTTGTCCCTTGTAGTTTTCCCCCCTGTTTTCTTTGAAAGGTCGATTGTAAAATAAGGTGAAGACAGTAGATTTATCTTATTTATGGTTCTAAATTGCGGTT

Coding sequences of Glyma.15G078300

Limit To All Plant Sequences

>Glyma.15g078300.1 sequence-type=CDS polypeptide=Glyma.15g078300.1.p locus=Glyma.15g078300 ID=Glyma.15g078300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACATGGTGCAATGACTCTGATGAGGATAGGGTTATTGAATCAACGACGCCAACAATAACTATTACTCCTAACACTGATGGCATAAAGCTCACCGAAGAAATTAGAACCATAACATGCCCCTCGTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAAAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGTGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCCTCAAAAGCATACACAACTGGAACGAGGAAAAGAAGAAAAGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCAGCCGGTGGTGCAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGACAAAAGAAGCCTGAGAAAACTAATTGGGTGATGCATCAATACCATCTTGGCAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGCAATCCCATTATAATAAAGGATTCATACGAAAAAATGTTGAATGATGGAAGTGGCCAAGACAACATTAATATATCATTAATACCTAAAACTACTGCAACTCTTTTGGATTGCTACACTGCTCCTTACATAGATTATGATCACGTCCATGTGAGTCATAACAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCGCTTAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGATTCTAG

>Glyma.15g078300.2 sequence-type=CDS polypeptide=Glyma.15g078300.2.p locus=Glyma.15g078300 ID=Glyma.15g078300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACATGGTGCAATGACTCTGATGAGGATAGGGTTATTGAATCAACGACGCCAACAATAACTATTACTCCTAACACTGATGGCATAAAGCTCACCGAAGAAATTAGAACCATAACATGCCCCTCGTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAAAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGTGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCCTCAAAAGCATACACAACTGGAACGAGGAAAAGAAGAAAAGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCAGCCGGTGGTGCAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGACAAAAGAAGCCTGAGAAAACTAATTGGGTGATGCATCAATACCATCTTGGCAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGCAATCCCATTATAATAAAGGATTCATACGAAAAAATGTTGAATGATGGAAGTGGCCAAGACAACATTAATATATCATTAATACCTAAAACTACTGCAACTCTTTTGGATTGCTACACTGCTCCTTACATAGATTATGATCACGTCCATGTGAGTCATAACAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCGCTTAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGATTCTAG

>Glyma.15g078300.3 sequence-type=CDS polypeptide=Glyma.15g078300.3.p locus=Glyma.15g078300 ID=Glyma.15g078300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACATGGTGCAATGACTCTGATGAGGATAGGGTTATTGAATCAACGACGCCAACAATAACTATTACTCCTAACACTGATGGCATAAAGCTCACCGAAGAAATTAGAACCATAACATGCCCCTCGTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAAAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGTGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCCTCAAAAGCATACACAACTGGAACGAGGAAAAGAAGAAAAGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCAGCCGGTGGTGCAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGACAAAAGAAGCCTGAGAAAACTAATTGGGTGATGCATCAATACCATCTTGGCAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGCAATCCCATTATAATAAAGGATTCATACGAAAAAATGTTGAATGATGGAAGTGGCCAAGACAACATTAATATATCATTAATACCTAAAACTACTGCAACTCTTTTGGATTGCTACACTGCTCCTTACATAGATTATGATCACGTCCATGTGAGTCATAACAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCGCTTAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGATTCTAG

Predicted protein sequences of Glyma.15G078300

Limit To All Plant Sequences

>Glyma.15g078300.1.p sequence-type=predicted peptide transcript=Glyma.15g078300.1 locus=Glyma.15g078300 ID=Glyma.15g078300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTWCNDSDEDRVIESTTPTITITPNTDGIKLTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAAAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSTEEEKDGELVVSKVFYQTQPRQCGNPIIIKDSYEKMLNDGSGQDNINISLIPKTTATLLDCYTAPYIDYDHVHVSHNRESSSQLIIPSSVVQVDGSYIRLTMDAKKARFESNTGKRF*

>Glyma.15g078300.2.p sequence-type=predicted peptide transcript=Glyma.15g078300.2 locus=Glyma.15g078300 ID=Glyma.15g078300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTWCNDSDEDRVIESTTPTITITPNTDGIKLTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAAAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSTEEEKDGELVVSKVFYQTQPRQCGNPIIIKDSYEKMLNDGSGQDNINISLIPKTTATLLDCYTAPYIDYDHVHVSHNRESSSQLIIPSSVVQVDGSYIRLTMDAKKARFESNTGKRF*

>Glyma.15g078300.3.p sequence-type=predicted peptide transcript=Glyma.15g078300.3 locus=Glyma.15g078300 ID=Glyma.15g078300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTWCNDSDEDRVIESTTPTITITPNTDGIKLTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAAAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSTEEEKDGELVVSKVFYQTQPRQCGNPIIIKDSYEKMLNDGSGQDNINISLIPKTTATLLDCYTAPYIDYDHVHVSHNRESSSQLIIPSSVVQVDGSYIRLTMDAKKARFESNTGKRF*

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