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Report for Sequence Feature Glyma.14g186900

Feature Type:gene_model
Chromosome:Gm14
Start:45148872
stop:45153968
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g186900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G50850.1AT Transketolase family protein JGI N/AIEA
GO:0006086GO-bp acetyl-CoA biosynthetic process from pyruvate EnsemblGenomesN/AIEA
GO:0006096GO-bp glycolytic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0005739GO-cc mitochondrion EnsemblGenomesN/AIEA
GO:0005759GO-cc mitochondrial matrix EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004739GO-mf pyruvate dehydrogenase (acetyl-transferring) activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
KOG0524 KOG Pyruvate dehydrogenase E1, beta subunit JGI N/AIEA
PTHR11624Panther DEHYDROGENASE RELATED JGI N/AIEA
PTHR11624:SF11Panther SUBFAMILY NOT NAMED JGI N/AIEA
PF02779PFAM Transketolase, pyrimidine binding domain JGI N/AIEA
PF02780PFAM Transketolase, C-terminal domain JGI N/AIEA
PWY-5173SoyCyc9 superpathway of acetyl-CoA biosynthesis Plant Metabolic Network ISS
PWY-5464SoyCyc9 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Plant Metabolic Network ISS
PYRUVDEHYD-PWYSoyCyc9 pyruvate decarboxylation to acetyl CoA Plant Metabolic Network ISS
GN7V-47748SoyCyc9-rxn 2-(α-hydroxyethyl)-TPP:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine acetyltransferase Plant Metabolic Network ISS

Proteins Associated with Glyma.14g186900
LocusGene SymbolProtein Name
PDH pyruvate dehydrogenase

Expression Patterns of Glyma.14g186900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g186900 not represented in the dataset
Glyma.14g186900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g186900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g36540 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g186900
>Glyma.14g186900.2 sequence-type=transcript locus=Glyma.14g186900 ID=Glyma.14g186900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTTAAATTTTACTTAGACCCAAAGATATTTTTCAGATAATAAAAAGAGAAAAAGAATAAATAAAAGCGGAAGAGAGGGTAGGCTGTTACGGTTTGGTTTGGTGGTTATTTGATTGGTGTGCATCCATGTTAAGCTAGTGGCGATCGGATCCAGCTACAGCCTACAACCTACAGATCAAGGAAGGAAGATGTTGGGTGTTATAAGGCACAAGAGTATTCGCCCCGCCTTCTCCGCAATCAGACACTTCTCTTCTGCAGCTAAAGAGATTACTGTCAGGGATGCTCTCAACTCCGCACTCGATGAGGAAATGTCAGCTGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGGGAATATCAGGGTGCATACAAGATATCCAAGGGGCTGCTCGACAAGTATGGCCCCGAGAGGGTTCTCGATACTCCAATCACTGAGGCTGGGTTTGCTGGGATTGGAGTTGGCGCTGCTTACTATGGTCTAAGGCCTGTTGTGGAGTTTATGACTTTTAACTTCTCCATGCAGGCAATAGATCATATTATTAACTCTGCCGCAAAATCAAACTACATGTCTGCTGGGCAAATATCTGTACCTATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGGGTTGGTGCTCAGCATTCTCAATGTTATGCATCTTTGTATGGTTCATGCCCTGGGTTGAAAGTCTTGTCACCATATTCATCTGAAGATGCCCGTGGTTTGCTTAAAGCTGCTATTAGGGACCCTGATCCTGTTGTTTTCCTTGAAAATGAATTGTTATATGGTGAGTCATTCCCTGTTTCGGCCGAAGTTCTTGATTCCAGTTTTTGCCTTCCCATAGGAAAAGCAAAGATTGAGAGGGAAGGAAAAGATGTGACTATTACAGCCTATTCAAAAATGGTTGGCTATGCTCTCAAGGCTGCTGAGACACTGGCAAAGGAAGGAATCAGTGCTGAGGTCATTAATTTGCGTTCAATCCGGCCGCTTGATCGATCCACAATCAATGCTTCTGTCAGGAAAACCAACAGGCTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGCGTTGGCGCTGAAATCTGCACATCTGTCATTGAAGAAAGTTTTGGTTATCTTGATGCACCCGTTGAGAGAATTGCTGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGAATGGCTGTCCCACAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCTACAGATCTGTGCCTTTGGCTGCATCTGCTTGAATGTTCTGGAAAATTTTCATGTCCTGGACTCACAGATGCTATACATTTTTTCCCCTTCTCAGCATATCTGGGAGGAAGTTAATGTTAAATAACTTGTACAACAATGACACAAAGGCAGCAGGAAGTTTTCTGCGTTTTTGGTTTCTGCTTGGCAATAACTAAAAATCAACTTTTTGAATACATTATTTCCAGCGGACGATCACTTTACTGCAAGATCTAACTTGCTGTTAGTTCATATTCGTTTACTGTTTTAGTTACATTGACAAACTAGAGATATCTGATTTGATGTGAGGTCCGTATTCTT

>Glyma.14g186900.3 sequence-type=transcript locus=Glyma.14g186900 ID=Glyma.14g186900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTTAAATTTTACTTAGACCCAAAGATATTTTTCAGATAATAAAAAGAGAAAAAGAATAAATAAAAGCGGAAGAGAGGGTAGGCTGTTACGGTTTGGTTTGGTGGTTATTTGATTGGTGTGCATCCATGTTAAGCTAGTGGCGATCGGATCCAGCTACAGCCTACAACCTACAGATCAAGGAAGGAAGATGTTGGGTGTTATAAGGCACAAGAGTATTCGCCCCGCCTTCTCCGCAATCAGACACTTCTCTTCTGCAGCTAAAGAGATTACTGTCAGGGATGCTCTCAACTCCGCACTCGATGAGGAAATGTCAGCTGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGGGAATATCAGGGTGCATACAAGATATCCAAGGGGCTGCTCGACAAGTATGGCCCCGAGAGGGTTCTCGATACTCCAATCACTGAGGCTGGGTTTGCTGGGATTGGAGTTGGCGCTGCTTACTATGGTCTAAGGCCTGTTGTGGAGTTTATGACTTTTAACTTCTCCATGCAGGCAATAGATCATATTATTAACTCTGCCGCAAAATCAAACTACATGTCTGCTGGGCAAATATCTGTACCTATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGGGTTGGTGCTCAGCATTCTCAATGTTATGCATCTTTGTATGGTTCATGCCCTGGGTTGAAAGTCTTGTCACCATATTCATCTGAAGATGCCCGTGGTTTGCTTAAAGCTGCTATTAGGGACCCTGATCCTGTTGTTTTCCTTGAAAATGAATTGTTATATGGTGAGTCATTCCCTGTTTCGGCCGAAGTTCTTGATTCCAGTTTTTGCCTTCCCATAGGAAAAGCAAAGATTGAGAGGGAAGGAAAAGATGTGACTATTACAGCCTATTCAAAAATGGTTGGCTATGCTCTCAAGGCTGCTGAGACACTGGCAAAGGAAGGAATCAGTGCTGAGGTCATTAATTTGCGTTCAATCCGGCCGCTTGATCGATCCACAATCAATGCTTCTGTCAGGAAAACCAACAGGCTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGCGTTGGCGCTGAAATCTGCACATCTGTCATTGAAGAAAGTTTTGGTTATCTTGATGCACCCGTTGAGAGAATTGCTGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGAATGGCTGTCCCACAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCTACAGATCTGTGCCTTTGGCTGCATCTGCTTGAATGTTCTGGAAAATTTTCATGTCCTGGTTAGTTCTTTGCAGAAACAAAATTTTCCCTATTTTCCGCCACAAAACAGCAGGAAGAAATTGCAACCAAAGAATGCTGATTTTAACTCATTTATTATGTTAGGCTTTGGTTTAAAAGATTCTGTTGTATGCATAATACTGTCCTAATTTTCAGGACTCACAGATGCTATACATTTTTTCCCCTTCTCAGCATATCTGGGAGGAAGTTAATGTTAAATAACTTGTACAACAATGACACAAAGGCAGCAGGAAGTTTTCTGCGTTTTTGGTTTCTGCTTGGCAATAACTAAAAATCAACTTTTTGAATACATTATTTCCAGCGGACGATCACTTTACTGCAA
Coding sequences of Glyma.14g186900
>Glyma.14g186900.1 sequence-type=CDS polypeptide=Glyma.14g186900.1.p locus=Glyma.14g186900 ID=Glyma.14g186900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGGGTGTTATAAGGCACAAGAGTATTCGCCCCGCCTTCTCCGCAATCAGACACTTCTCTTCTGCAGCTAAAGAGATTACTGTCAGGGATGCTCTCAACTCCGCACTCGATGAGGAAATGTCAGCTGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGGGAATATCAGGGTGCATACAAGATATCCAAGGGGCTGCTCGACAAGTATGGCCCCGAGAGGGTTCTCGATACTCCAATCACTGAGGCTGGGTTTGCTGGGATTGGAGTTGGCGCTGCTTACTATGGTCTAAGGCCTGTTGTGGAGTTTATGACTTTTAACTTCTCCATGCAGGCAATAGATCATATTATTAACTCTGCCGCAAAATCAAACTACATGTCTGCTGGGCAAATATCTGTACCTATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGGGTTGGTGCTCAGCATTCTCAATGTTATGCATCTTTGTATGGTTCATGCCCTGGGTTGAAAGTCTTGTCACCATATTCATCTGAAGATGCCCGTGGTTTGCTTAAAGCTGCTATTAGGGACCCTGATCCTGTTGTTTTCCTTGAAAATGAATTGTTATATGGTGAGTCATTCCCTGTTTCGGCCGAAGTTCTTGATTCCAGTTTTTGCCTTCCCATAGGAAAAGCAAAGATTGAGAGGGAAGGAAAAGATGTGACTATTACAGCCTATTCAAAAATGGTTGGCTATGCTCTCAAGGCTGCTGAGACACTGGCAAAGGAAGGAATCAGTGCTGAGGTCATTAATTTGCGTTCAATCCGGCCGCTTGATCGATCCACAATCAATGCTTCTGTCAGGAAAACCAACAGGCTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGCGTTGGCGCTGAAATCTGCACATCTGTCATTGAAGAAAGTTTTGGTTATCTTGATGCACCCGTTGAGAGAATTGCTGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGAATGGCTGTCCCACAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCTACAGATCTGTGCCTTTGGCTGCATCTGCTTGA

>Glyma.14g186900.2 sequence-type=CDS polypeptide=Glyma.14g186900.2.p locus=Glyma.14g186900 ID=Glyma.14g186900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGGGTGTTATAAGGCACAAGAGTATTCGCCCCGCCTTCTCCGCAATCAGACACTTCTCTTCTGCAGCTAAAGAGATTACTGTCAGGGATGCTCTCAACTCCGCACTCGATGAGGAAATGTCAGCTGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGGGAATATCAGGGTGCATACAAGATATCCAAGGGGCTGCTCGACAAGTATGGCCCCGAGAGGGTTCTCGATACTCCAATCACTGAGGCTGGGTTTGCTGGGATTGGAGTTGGCGCTGCTTACTATGGTCTAAGGCCTGTTGTGGAGTTTATGACTTTTAACTTCTCCATGCAGGCAATAGATCATATTATTAACTCTGCCGCAAAATCAAACTACATGTCTGCTGGGCAAATATCTGTACCTATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGGGTTGGTGCTCAGCATTCTCAATGTTATGCATCTTTGTATGGTTCATGCCCTGGGTTGAAAGTCTTGTCACCATATTCATCTGAAGATGCCCGTGGTTTGCTTAAAGCTGCTATTAGGGACCCTGATCCTGTTGTTTTCCTTGAAAATGAATTGTTATATGGTGAGTCATTCCCTGTTTCGGCCGAAGTTCTTGATTCCAGTTTTTGCCTTCCCATAGGAAAAGCAAAGATTGAGAGGGAAGGAAAAGATGTGACTATTACAGCCTATTCAAAAATGGTTGGCTATGCTCTCAAGGCTGCTGAGACACTGGCAAAGGAAGGAATCAGTGCTGAGGTCATTAATTTGCGTTCAATCCGGCCGCTTGATCGATCCACAATCAATGCTTCTGTCAGGAAAACCAACAGGCTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGCGTTGGCGCTGAAATCTGCACATCTGTCATTGAAGAAAGTTTTGGTTATCTTGATGCACCCGTTGAGAGAATTGCTGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGAATGGCTGTCCCACAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCTACAGATCTGTGCCTTTGGCTGCATCTGCTTGA

>Glyma.14g186900.3 sequence-type=CDS polypeptide=Glyma.14g186900.3.p locus=Glyma.14g186900 ID=Glyma.14g186900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGGGTGTTATAAGGCACAAGAGTATTCGCCCCGCCTTCTCCGCAATCAGACACTTCTCTTCTGCAGCTAAAGAGATTACTGTCAGGGATGCTCTCAACTCCGCACTCGATGAGGAAATGTCAGCTGATCCTAAAGTCTTCTTGATGGGTGAAGAGGTTGGGGAATATCAGGGTGCATACAAGATATCCAAGGGGCTGCTCGACAAGTATGGCCCCGAGAGGGTTCTCGATACTCCAATCACTGAGGCTGGGTTTGCTGGGATTGGAGTTGGCGCTGCTTACTATGGTCTAAGGCCTGTTGTGGAGTTTATGACTTTTAACTTCTCCATGCAGGCAATAGATCATATTATTAACTCTGCCGCAAAATCAAACTACATGTCTGCTGGGCAAATATCTGTACCTATTGTCTTTAGAGGACCCAATGGTGCTGCTGCTGGGGTTGGTGCTCAGCATTCTCAATGTTATGCATCTTTGTATGGTTCATGCCCTGGGTTGAAAGTCTTGTCACCATATTCATCTGAAGATGCCCGTGGTTTGCTTAAAGCTGCTATTAGGGACCCTGATCCTGTTGTTTTCCTTGAAAATGAATTGTTATATGGTGAGTCATTCCCTGTTTCGGCCGAAGTTCTTGATTCCAGTTTTTGCCTTCCCATAGGAAAAGCAAAGATTGAGAGGGAAGGAAAAGATGTGACTATTACAGCCTATTCAAAAATGGTTGGCTATGCTCTCAAGGCTGCTGAGACACTGGCAAAGGAAGGAATCAGTGCTGAGGTCATTAATTTGCGTTCAATCCGGCCGCTTGATCGATCCACAATCAATGCTTCTGTCAGGAAAACCAACAGGCTGGTGACAGTTGAAGAAGGGTTTCCTCAGCATGGCGTTGGCGCTGAAATCTGCACATCTGTCATTGAAGAAAGTTTTGGTTATCTTGATGCACCCGTTGAGAGAATTGCTGGGGCTGATGTTCCCATGCCTTATGCAGCAAATCTGGAAAGAATGGCTGTCCCACAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCATGCTACAGATCTGTGCCTTTGGCTGCATCTGCTTGA
Predicted protein sequences of Glyma.14g186900
>Glyma.14g186900.1.p sequence-type=predicted peptide transcript=Glyma.14g186900.1 locus=Glyma.14g186900 ID=Glyma.14g186900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLGVIRHKSIRPAFSAIRHFSSAAKEITVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFAGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYASLYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAYSKMVGYALKAAETLAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPLAASA*

>Glyma.14g186900.2.p sequence-type=predicted peptide transcript=Glyma.14g186900.2 locus=Glyma.14g186900 ID=Glyma.14g186900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLGVIRHKSIRPAFSAIRHFSSAAKEITVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFAGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYASLYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAYSKMVGYALKAAETLAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPLAASA*

>Glyma.14g186900.3.p sequence-type=predicted peptide transcript=Glyma.14g186900.3 locus=Glyma.14g186900 ID=Glyma.14g186900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLGVIRHKSIRPAFSAIRHFSSAAKEITVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFAGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYASLYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAYSKMVGYALKAAETLAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPLAASA*






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