Glyma.14g173000

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Report for Sequence Feature Glyma.14g173000

Feature Type:	gene_model
Chromosome:	Gm14
Start:	42769792
stop:	42780190
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.14g173000

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G22260.1	AT	Myosin heavy chain-related protein	JGI	N/A	IEA
GO:0007131	GO-bp	reciprocal meiotic recombination	EnsemblGenomes	N/A	IEA
GO:0000795	GO-cc	synaptonemal complex	EnsemblGenomes	N/A	IEA
KOG0978	KOG	E3 ubiquitin ligase involved in syntaxin degradation	JGI	N/A	IEA
PTHR23160	Panther	MYOSIN HEAVY CHAIN-RELATED	JGI	N/A	IEA

Expression Patterns of Glyma.14g173000

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g173000 not represented in the dataset	Glyma.14g173000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.14g173000

Paralog	Evidence	Comments
Glyma.13g089100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g173000 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma14g34810	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.14g173000

Limit To All Plant Sequences

>Glyma.14g173000.2 sequence-type=transcript locus=Glyma.14g173000 ID=Glyma.14g173000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGAATCTAGGATTCCCAATCTCCAAAAGCCTCGACCAATTCAAATCGCTGTACGGTTCAATTTCGGCAACACCGAAGCCATTATCTTCGCGTCCTTCTGCGGATTCCGTTTCGTCGGGGAGTTTCGCAAACCTGAAGCTCACCGCAGAGAAACTGGTGAAAGAGCAAGCTTCGGTGAAGACTGATCTTGAAAATGCGAATTCTAAGCTTAAGAAGTCGCAGGAGTATGTACATGCATTAGAAGAAAAATTGCAGAATGCGTTAAACGAAAACGCGAAGCTCAAGGTCAAGCAGAAGGAAGATAAGAAAATGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAACTTACAGAGACTTTGCAGCAGCTGGCTGGTTTGGTTCAGGACGCTGAAAAAGATAAGGAAACATTGGAAAATAAACTGTCAGCTAGTTCAGAAGCGCTTGATAGCTTGAATAAACAGATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGTACACGTGATAATGAGCTAGAGAAGATCAAATATGCTACAGAAGAAAGGGAGAAATTTCACAGAGATGAACAGTGCAGAGTTACCAATGTTATACAAGACAAGGACACTATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAAGTTGGAAGAGGTTCACCTACAGTTAAAAGTTAAAGAAGATGAAATTATGCATCACTTAACCAGTCAAGAGAAATTGGAGAAAGAAAAGAGTGATCTTCAATTGTGGAATGCAGGTCTTGCAGAAAAGCTTGACATCTCACTTCAGGAAATCAAAAACCTTGAAGAATCACTTCATTCATTGGCTGCACATTTGTCAAATTTAGATAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATCTGCTCTATGCTTCTTGCTTCCAGTTGGTTCAGCAGGAGAGAGAAACTTTCTCAAAGCATGCTCGATACCAGTATAGTGAGCTTAACAATAAATTTTTTGTCTTGGAATTAGAAAATAATGCAGCTCAAATGAAAATTCATGAGTTAAGCAAAAATGTGGATGAACTTCAGAAAGTTCATGAATCTACTCTAGCCAAGCTTACAGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGAGTCAGAAGCTGAAACTTTAATCTCAAAAAAGAAAGATGCAGAGGTTTTAATTTCCAAATTAGAAAAGAAAGCTGATTTTTTGCTAGAAAGTTCTAGATCATCAGAGAACCAAGTGCAAGGTTTACTGCTGAAGGTTTCAACCTTAGAGACTGAAAGCAAAGAAAATACAGAAAGACTGCAGGCAGAGATATCGAAGAAATCAGATGAAATAGATACTTTGCAAAACGAGAGAATGAAACTAGAGCAGCATGCTGATTCTCTTGATAAAGAAGTCATCCAGCTTCAGAATTCCTTGGAGGAAAAAGATAAGTGTATTTTACATTCTAAGGAACAGGAAAAGAAGCTGGAAGATCAGATTGCAGAGAATCTATCATTATTGACTGCTGCTGAAAGCAAACTTTCAGAGGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATTAATGATATTAAGAGGAAGTATGAGTTGGAGAAGATGGAAATTGTGAACATGGAAAAAGACAAGGTTAACAAAGCCATTGCAGAAATTGAGGGAAAGTGTGGCCAAAAACTTGCAGAATGGAAAGAAGAATCAAGGCAGCAGTTGATGCGCATTCAGGAGGAACACGCGTTGCTCGTTACTCAAATGAAGCAGGAGCATGACAAGATGCAACTAAGCCTCATAGCTGAACACAATGAACAACTAAAGCGTACCCAACTGCAAGCTGAGAATGAACTGAGAGAGAAAACAATGTATATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGCCAGAAGCTGGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGGCAACGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAGCCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCCATTAAGAGAAGGAGTTCTTTTGGTGGTAAAAGAAATCAGCATGACCTAGACTCTCCTCACATTGAAGCGACACAAAGACCAGTACCAAAGTTGTTGAAAAAAGTGGAGAACGTTAAAACAGGAAGTGCAGTGAGCATTCCCAAGCATCATAGAAAGGTAACTTGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAACTATCACAAAGAAAAGAAAAACAAGAAGTACTGTCATGTTTGAGACATCTTACATGCCTGTGAATATTGAATAATATCTTGTCTTTATCAGGACCCTAGAAATGGGAAGACAAATACACCAAAAGTAAA

Coding sequences of Glyma.14g173000

Limit To All Plant Sequences

>Glyma.14g173000.1 sequence-type=CDS polypeptide=Glyma.14g173000.1.p locus=Glyma.14g173000 ID=Glyma.14g173000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGAATCTAGGATTCCCAATCTCCAAAAGCCTCGACCAATTCAAATCGCTGTACGGTTCAATTTCGGCAACACCGAAGCCATTATCTTCGCGTCCTTCTGCGGATTCCGTTTCGTCGGGGAGTTTCGCAAACCTGAAGCTCACCGCAGAGAAACTGGTGAAAGAGCAAGCTTCGGTGAAGACTGATCTTGAAAATGCGAATTCTAAGCTTAAGAAGTCGCAGGAGTATGTACATGCATTAGAAGAAAAATTGCAGAATGCGTTAAACGAAAACGCGAAGCTCAAGGTCAAGCAGAAGGAAGATAAGAAAATGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAACTTACAGAGACTTTGCAGCAGCTGGCTGGTTTGGTTCAGGACGCTGAAAAAGATAAGGAAACATTGGAAAATAAACTGTCAGCTAGTTCAGAAGCGCTTGATAGCTTGAATAAACAGATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGTACACGTGATAATGAGCTAGAGAAGATCAAATATGCTACAGAAGAAAGGGAGAAATTTCACAGAGATGAACAGTGCAGAGTTACCAATGTTATACAAGACAAGGACACTATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAAGTTGGAAGAGGTTCACCTACAGTTAAAAGTTAAAGAAGATGAAATTATGCATCACTTAACCAGTCAAGAGAAATTGGAGAAAGAAAAGAGTGATCTTCAATTGTGGAATGCAGGTCTTGCAGAAAAGCTTGACATCTCACTTCAGGAAATCAAAAACCTTGAAGAATCACTTCATTCATTGGCTGCACATTTGTCAAATTTAGATAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATCTGCTCTATGCTTCTTGCTTCCAGTTGGTTCAGCAGGAGAGAGAAACTTTCTCAAAGCATGCTCGATACCAGTATAGTGAGCTTAACAATAAATTTTTTGTCTTGGAATTAGAAAATAATGCAGCTCAAATGAAAATTCATGAGTTAAGCAAAAATGTGGATGAACTTCAGAAAGTTCATGAATCTACTCTAGCCAAGCTTACAGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGAGTCAGAAGCTGAAACTTTAATCTCAAAAAAGAAAGATGCAGAGGTTTTAATTTCCAAATTAGAAAAGAAAGCTGATTTTTTGCTAGAAAGTTCTAGATCATCAGAGAACCAAGTGCAAGGTTTACTGCTGAAGGTTTCAACCTTAGAGACTGAAAGCAAAGAAAATACAGAAAGACTGCAGGCAGAGATATCGAAGAAATCAGATGAAATAGATACTTTGCAAAACGAGAGAATGAAACTAGAGCAGCATGCTGATTCTCTTGATAAAGAAGTCATCCAGCTTCAGAATTCCTTGGAGGAAAAAGATAAGTGTATTTTACATTCTAAGGAACAGGAAAAGAAGCTGGAAGATCAGATTGCAGAGAATCTATCATTATTGACTGCTGCTGAAAGCAAACTTTCAGAGGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATTAATGATATTAAGAGGAAGTATGAGTTGGAGAAGATGGAAATTGTGAACATGGAAAAAGACAAGGTTAACAAAGCCATTGCAGAAATTGAGGGAAAGTGTGGCCAAAAACTTGCAGAATGGAAAGAAGAATCAAGGCAGCAGTTGATGCGCATTCAGGAGGAACACGCGTTGCTCGTTACTCAAATGAAGCAGGAGCATGACAAGATGCAACTAAGCCTCATAGCTGAACACAATGAACAACTAAAGCGTACCCAACTGCAAGCTGAGAATGAACTGAGAGAGAAAACAATGTATATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGCCAGAAGCTGGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGGCAACGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAGCCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCCATTAAGAGAAGGAGTTCTTTTGGTGGTAAAAGAAATCAGCATGACCTAGACTCTCCTCACATTGAAGCGACACAAAGACCAGTACCAAAGTTGTTGAAAAAAGTGGAGAACGTTAAAACAGGAAGTGCAGTGAGCATTCCCAAGCATCATAGAAAGGTAACTTGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAACTATCACAAAGAAAAGAAAAACAAGAAGTACTGTCATGTTTGAGGCATGTATCTGTTTCTCTTTAAATGCTATTAACCATATATATAAATATGGAGGCCATCCTCGTCCTTCAAATATTGGTGATTTGTTTTCAGAAGGGTCTCTTAATCCATATGCGGACGATCCCTATGCATTTGATTAG

>Glyma.14g173000.2 sequence-type=CDS polypeptide=Glyma.14g173000.2.p locus=Glyma.14g173000 ID=Glyma.14g173000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGAATCTAGGATTCCCAATCTCCAAAAGCCTCGACCAATTCAAATCGCTGTACGGTTCAATTTCGGCAACACCGAAGCCATTATCTTCGCGTCCTTCTGCGGATTCCGTTTCGTCGGGGAGTTTCGCAAACCTGAAGCTCACCGCAGAGAAACTGGTGAAAGAGCAAGCTTCGGTGAAGACTGATCTTGAAAATGCGAATTCTAAGCTTAAGAAGTCGCAGGAGTATGTACATGCATTAGAAGAAAAATTGCAGAATGCGTTAAACGAAAACGCGAAGCTCAAGGTCAAGCAGAAGGAAGATAAGAAAATGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAACTTACAGAGACTTTGCAGCAGCTGGCTGGTTTGGTTCAGGACGCTGAAAAAGATAAGGAAACATTGGAAAATAAACTGTCAGCTAGTTCAGAAGCGCTTGATAGCTTGAATAAACAGATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGTACACGTGATAATGAGCTAGAGAAGATCAAATATGCTACAGAAGAAAGGGAGAAATTTCACAGAGATGAACAGTGCAGAGTTACCAATGTTATACAAGACAAGGACACTATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAAGTTGGAAGAGGTTCACCTACAGTTAAAAGTTAAAGAAGATGAAATTATGCATCACTTAACCAGTCAAGAGAAATTGGAGAAAGAAAAGAGTGATCTTCAATTGTGGAATGCAGGTCTTGCAGAAAAGCTTGACATCTCACTTCAGGAAATCAAAAACCTTGAAGAATCACTTCATTCATTGGCTGCACATTTGTCAAATTTAGATAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATCTGCTCTATGCTTCTTGCTTCCAGTTGGTTCAGCAGGAGAGAGAAACTTTCTCAAAGCATGCTCGATACCAGTATAGTGAGCTTAACAATAAATTTTTTGTCTTGGAATTAGAAAATAATGCAGCTCAAATGAAAATTCATGAGTTAAGCAAAAATGTGGATGAACTTCAGAAAGTTCATGAATCTACTCTAGCCAAGCTTACAGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGAGTCAGAAGCTGAAACTTTAATCTCAAAAAAGAAAGATGCAGAGGTTTTAATTTCCAAATTAGAAAAGAAAGCTGATTTTTTGCTAGAAAGTTCTAGATCATCAGAGAACCAAGTGCAAGGTTTACTGCTGAAGGTTTCAACCTTAGAGACTGAAAGCAAAGAAAATACAGAAAGACTGCAGGCAGAGATATCGAAGAAATCAGATGAAATAGATACTTTGCAAAACGAGAGAATGAAACTAGAGCAGCATGCTGATTCTCTTGATAAAGAAGTCATCCAGCTTCAGAATTCCTTGGAGGAAAAAGATAAGTGTATTTTACATTCTAAGGAACAGGAAAAGAAGCTGGAAGATCAGATTGCAGAGAATCTATCATTATTGACTGCTGCTGAAAGCAAACTTTCAGAGGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATTAATGATATTAAGAGGAAGTATGAGTTGGAGAAGATGGAAATTGTGAACATGGAAAAAGACAAGGTTAACAAAGCCATTGCAGAAATTGAGGGAAAGTGTGGCCAAAAACTTGCAGAATGGAAAGAAGAATCAAGGCAGCAGTTGATGCGCATTCAGGAGGAACACGCGTTGCTCGTTACTCAAATGAAGCAGGAGCATGACAAGATGCAACTAAGCCTCATAGCTGAACACAATGAACAACTAAAGCGTACCCAACTGCAAGCTGAGAATGAACTGAGAGAGAAAACAATGTATATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGCCAGAAGCTGGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGGCAACGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAGCCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCCATTAAGAGAAGGAGTTCTTTTGGTGGTAAAAGAAATCAGCATGACCTAGACTCTCCTCACATTGAAGCGACACAAAGACCAGTACCAAAGTTGTTGAAAAAAGTGGAGAACGTTAAAACAGGAAGTGCAGTGAGCATTCCCAAGCATCATAGAAAGGTAACTTGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAACTATCACAAAGAAAAGAAAAACAAGAAGTACTGTCATGTTTGAGACATCTTACATGCCTGTGAATATTGAATAA

Predicted protein sequences of Glyma.14g173000

Limit To All Plant Sequences

>Glyma.14g173000.1.p sequence-type=predicted peptide transcript=Glyma.14g173000.1 locus=Glyma.14g173000 ID=Glyma.14g173000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKNLGFPISKSLDQFKSLYGSISATPKPLSSRPSADSVSSGSFANLKLTAEKLVKEQASVKTDLENANSKLKKSQEYVHALEEKLQNALNENAKLKVKQKEDKKMWKGLESKFSSTKTLCDQLTETLQQLAGLVQDAEKDKETLENKLSASSEALDSLNKQMDGLSLKLDSAQETISTRDNELEKIKYATEEREKFHRDEQCRVTNVIQDKDTMIRNLEEMLTSSRLATENLNSKLEEVHLQLKVKEDEIMHHLTSQEKLEKEKSDLQLWNAGLAEKLDISLQEIKNLEESLHSLAAHLSNLDKESLNLLSKFDEMNLLYASCFQLVQQERETFSKHARYQYSELNNKFFVLELENNAAQMKIHELSKNVDELQKVHESTLAKLTEDSRLAAERIQSLESEAETLISKKKDAEVLISKLEKKADFLLESSRSSENQVQGLLLKVSTLETESKENTERLQAEISKKSDEIDTLQNERMKLEQHADSLDKEVIQLQNSLEEKDKCILHSKEQEKKLEDQIAENLSLLTAAESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKVNKAIAEIEGKCGQKLAEWKEESRQQLMRIQEEHALLVTQMKQEHDKMQLSLIAEHNEQLKRTQLQAENELREKTMYMRNDHEAQIKALRCELEDECQKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSFGGKRNQHDLDSPHIEATQRPVPKLLKKVENVKTGSAVSIPKHHRKVTCHEYEVETSNGRTITKKRKTRSTVMFEACICFSLNAINHIYKYGGHPRPSNIGDLFSEGSLNPYADDPYAFD*

>Glyma.14g173000.2.p sequence-type=predicted peptide transcript=Glyma.14g173000.2 locus=Glyma.14g173000 ID=Glyma.14g173000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKNLGFPISKSLDQFKSLYGSISATPKPLSSRPSADSVSSGSFANLKLTAEKLVKEQASVKTDLENANSKLKKSQEYVHALEEKLQNALNENAKLKVKQKEDKKMWKGLESKFSSTKTLCDQLTETLQQLAGLVQDAEKDKETLENKLSASSEALDSLNKQMDGLSLKLDSAQETISTRDNELEKIKYATEEREKFHRDEQCRVTNVIQDKDTMIRNLEEMLTSSRLATENLNSKLEEVHLQLKVKEDEIMHHLTSQEKLEKEKSDLQLWNAGLAEKLDISLQEIKNLEESLHSLAAHLSNLDKESLNLLSKFDEMNLLYASCFQLVQQERETFSKHARYQYSELNNKFFVLELENNAAQMKIHELSKNVDELQKVHESTLAKLTEDSRLAAERIQSLESEAETLISKKKDAEVLISKLEKKADFLLESSRSSENQVQGLLLKVSTLETESKENTERLQAEISKKSDEIDTLQNERMKLEQHADSLDKEVIQLQNSLEEKDKCILHSKEQEKKLEDQIAENLSLLTAAESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKVNKAIAEIEGKCGQKLAEWKEESRQQLMRIQEEHALLVTQMKQEHDKMQLSLIAEHNEQLKRTQLQAENELREKTMYMRNDHEAQIKALRCELEDECQKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSFGGKRNQHDLDSPHIEATQRPVPKLLKKVENVKTGSAVSIPKHHRKVTCHEYEVETSNGRTITKKRKTRSTVMFETSYMPVNIE*

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