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Report for Sequence Feature Glyma.14g162400

Feature Type:gene_model
Chromosome:Gm14
Start:39321684
stop:39329039
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g162400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53050.2AT alpha/beta-Hydrolases superfamily protein JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
KOG4178 KOG Soluble epoxide hydrolase JGI N/AIEA
PTHR10992Panther ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN JGI N/AIEA
PTHR10992:SF11Panther JGI N/AIEA
PF00561PFAM alpha/beta hydrolase fold JGI N/AIEA
GN7V-66177SoyCyc9-rxn carboxylesterase Plant Metabolic Network ISS

Expression Patterns of Glyma.14g162400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g162400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g32900 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g162400
>Glyma.14g162400.1 sequence-type=CDS polypeptide=Glyma.14g162400.1.p locus=Glyma.14g162400 ID=Glyma.14g162400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCGTTTTGCAACGTCGGAACGCAGCTACCCTCCCCCGTCGCCGACGTGCCCCTCAACAATGACATCAAGATATTCTACAGAACTTACGGTGGCGGTCCAACCAAAGTGCTCCTCATCATAGGATTGGCCGCGACGCACGAAGCGTGGGGCCCACAAATCAAGGGCTTGACTGGAGCAACCGTCCCCGACGACGTCGTTTGGAGCGAAGAAGAAGGCAATGGTGGCATCCATGTATGCGCGTTTGACAATCGCGGCGTCGGTCGCAGCTCCGTGCCTGTCGAAAAATCTGAATTCTCAACCAAGATCATGGCGAAGGATGCAATTGCTTTGTTAGATCATCTAGGTTGGAAAAAAGCCCATGTTTTTGGGCACTCGATGGGAGCCATGATAGCTTGTAAAGTAGCAGCAATGGTTCCTGATCGAGTCCTTTCCTTGGCATTGCTCAACGTGACGGGTGGAGGTTTTCAATGTTTTCCAAAGTTGGACCAACAAACGATCTCTGTTGCTTACCGATTCTTGAAAGCAAAGACACCTGAACAAAGGGCTGCTGTTGACTTGGACACCCATTACTCTCAAGAATATCTTGAGGAATACGTTGGAACAGATAAGAGGAGAGCCATCTTATATCAGCAATATGTTAAAGGTATATCAACAACTGGGATGCAATCTAACTATGGTTTCGATGGTCAACTCAATGCATGTTGGGCACATAAAATGACTGAAACAGAGATTGAGGTGATCAAATCTGCAGGCTTTCTTGTTTCAGTCATCCATGGCAGGCATGATATAATTGCTCAGATATATTATGCAAAAAGACTTGCTGAGAAGCTTCATCCAGTGGCTAGAATGGTAGATCTTCATGGAGGTCATTTAGTAAGTCATGAGCGGTCTGAAGAGGTTAATCAAGCACTATTTGACTTGATCAAGGCATCAAAAGTGAATATGAGCCCACATGATTGGACTAATTTGCCAAAGAAAGAGTCTTGGTGGAAAGAGAAAAGGGTTTTGATCAGAACAAACATTCAGGCCGGAAGCAATGTCTCCCTTAACTGCTGCATGTTAGAAAAACTGCATCTCTTCCTATTATACCTCTTTGGTCTTCTTGTTTTAGCATTTGAATATGGAAGAAAGCTTCTAGGAAGCTTAAAACCAGCTCAAGCTGGAGGTTCCCCCTCATATATTGAAAGTCAATAA
Predicted protein sequences of Glyma.14g162400
>Glyma.14g162400.1.p sequence-type=predicted peptide transcript=Glyma.14g162400.1 locus=Glyma.14g162400 ID=Glyma.14g162400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPFCNVGTQLPSPVADVPLNNDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLTGATVPDDVVWSEEEGNGGIHVCAFDNRGVGRSSVPVEKSEFSTKIMAKDAIALLDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQQTISVAYRFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQLNACWAHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAEKLHPVARMVDLHGGHLVSHERSEEVNQALFDLIKASKVNMSPHDWTNLPKKESWWKEKRVLIRTNIQAGSNVSLNCCMLEKLHLFLLYLFGLLVLAFEYGRKLLGSLKPAQAGGSPSYIESQ*






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