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Report for Sequence Feature Glyma.14g162300

Feature Type:gene_model
Chromosome:Gm14
Start:39032596
stop:39045116
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g162300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53460.1AT NADH-dependent glutamate synthase 1 JGI N/AIEA
GO:0006537GO-bp glutamate biosynthetic process EnsemblGenomesN/AIEA
GO:0006537GO-bp glutamate biosynthetic process JGI N/AIEA
GO:0006807GO-bp nitrogen compound metabolic process EnsemblGenomesN/AIEA
GO:0006807GO-bp nitrogen compound metabolic process JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0019676GO-bp ammonia assimilation cycle EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0005506GO-mf iron ion binding EnsemblGenomesN/AIEA
GO:0010181GO-mf FMN binding EnsemblGenomesN/AIEA
GO:0015930GO-mf glutamate synthase activity EnsemblGenomesN/AIEA
GO:0015930GO-mf glutamate synthase activity JGI N/AIEA
GO:0016040GO-mf glutamate synthase (NADH) activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0016638GO-mf oxidoreductase activity, acting on the CH-NH2 group of donors EnsemblGenomesN/AIEA
GO:0016638GO-mf oxidoreductase activity, acting on the CH-NH2 group of donors JGI N/AIEA
GO:0016639GO-mf oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor EnsemblGenomesN/AIEA
GO:0045181GO-mf glutamate synthase activity, NAD(P)H as acceptor EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
GO:0051536GO-mf iron-sulfur cluster binding EnsemblGenomesN/AIEA
GO:0051538GO-mf 3 iron, 4 sulfur cluster binding EnsemblGenomesN/AIEA
KOG0399 KOG Glutamate synthase JGI N/AIEA
PTHR11938Panther FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE JGI N/AIEA
PTHR11938:SF1Panther PROTEIN W07E11.1, ISOFORM B JGI N/AIEA
PF00070PFAM Pyridine nucleotide-disulphide oxidoreductase JGI N/AIEA
PF00310PFAM Glutamine amidotransferases class-II JGI N/AIEA
PF01493PFAM GXGXG motif JGI N/AIEA
PF01645PFAM Conserved region in glutamate synthase JGI N/AIEA
PF04898PFAM Glutamate synthase central domain JGI N/AIEA
PF07992PFAM Pyridine nucleotide-disulphide oxidoreductase JGI N/AIEA
GLUGLNSYN-PWYSoyCyc9 L-glutamate biosynthesis IV Plant Metabolic Network ISS
PWY-3282SoyCyc9 superpathway of ammonia assimilation (plants) Plant Metabolic Network ISS
PWY-6963SoyCyc9 ammonia assimilation cycle I Plant Metabolic Network ISS
GN7V-44822SoyCyc9-rxn glutamate synthase (NADH) Plant Metabolic Network ISS

Expression Patterns of Glyma.14g162300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g162300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g32500 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g162300
>Glyma.14g162300.1 sequence-type=CDS polypeptide=Glyma.14g162300.1.p locus=Glyma.14g162300 ID=Glyma.14g162300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGAACGCGCTGTCGTTTACGCTCCCGGCTCTCAACAACCCTCAGCTAAACGCTTTGAATAGCCCTAACAAGGCGCGTCTGCGCCACGGCCTGAGAATCCGGGTTGTTGCGTCGTGCATAGAGAGGAAGAGGTTCTTGGGGACCCGGGTGCGGCCAAGTGGGTCGGACAGGATCTGGTTGCTGCAGTCGGGTCGGGTGCCGAAGCTGAGGGTGGCGGTGCGGTCGGCATTCTCGGCGGTGCCGGAGAAGCCGCTGGGGCTGTATGATCCGGCGATGGACAAGGACTCGTGCGGGGTCGGGTTCGTGGCGGAGTTGTCTGGCGAGAGCAGCCGCAAAACGGTGACGGACGCGCTGGAAATGTTGGTGCGGATGACGCACAGAGGTGCATGCGGATGCGAAGCCAACACTGGAGATGGTGCCGGCATTCTTGTGGCTCTGCCTCATGTCTTTTACCAGGAGGTTGTGGATTTTGAGCTTCCTCCGCAAGGAAAATATGCAGTTGGCATGCTTTTCTTGCCGAAGTCTGAGAAACGAAGGGAGGAAAGCAAAAAAATGTTTAGCAAGGTTGCTGAATCTCTGGGGCACACGATTCTTGGATGGCGGTCTGTGCCTACTGATAATGCAGGATTGGGAAAATCGGCCCTGCAGACTGAACCAGTGATTGAACAGGTGTTTCTTACACCAAGTGCTAAATCAAAAGTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTCAGCATGGCTGCTATTACATCTGCATTAAACCTCCAAAATGATGGCATTACAGATTTCTACATCTGTTCACTTTCATCTAGGACTGTTGTTTACAAAGGTCAGCTAACACCAGCTCAGCTGAGGGATTATTACTTTGCAGATATTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACACTCACGGTTTTCTACAAATACTTTCCCTAGCTGGGATCGTGCTCAACCTATGCGTGTATTGGGACACAACGGAGAAATCAACACACTCAGAGGCAATGTTAACTGGATGAAGGCACGTGAGGGTTTACTCAAATGCAAGGAGCTTGGTTTATCAGAGAATGAATTAAAGAAGCTTTTGCCTATTGTGGATGCAAATTCGTCAGATTCAGGAGCTTTTGATGGTGTGCTTGAGTTTTTGCTTCATTCGGGAAAAAGTCTTCCTGAAGCTGTTATGATGATGATTCCTGAAGCATGGCAAAATGACAAGAACATGGATTCTCAGCGTAAAGCATTCTATGAATACTTCTCAGCTCTCATGGAGCCATGGGATGGGCCAGCTCTTATATCATTTACTGATGGTCACTATCTTGGAGCTACATTGGATAGGAATGGACTGCGACCAGGCCGTTTCTATGTCACCCATAGTGGACGAGTTATTATGGCAAGTGAAGTTGGGGTTGTAGACATTCCACCAGAAGATGTGCGTAGGAAAGGAAGACTAAATCCTGGTATGATGCTGTTGGTTGATTTTGAGAAGCATATAGTCGTAAATGATGATGCCTTGAAAGAACAGTACTCTTTGGCAAGACCTTACGAGGATTGGCTCAAAAGGCAGAAAATTGAACTCAAAGACATCGTTAACTCTGTTGATGAATCTGAAAGAGTGCCGCCACCCATAGCAGGAGTTGCTCCACTATCCAATGATGATGCGGATATGGAAAATATGGGAATTCATGGTTTATTGGCTCCATTGAAAGCTTTTGGATATACAGTTGAATCATTGGAAATGCTATTACTTCCTATGGCCAAGGATGGCGTAGAAGCCCTAGGGTCAATGGGAAATGATACTCCATTGGCTGTCATGTCTAAAAGAGAAAAACTCACTTTCGAGTATTTCAAGCAAATGTTTGCTCAAGTGACAAACCCTCCTATCGATCCTATTAGAGAGAAAATAGTCACTTCTATGCAATGTATGGTTGGTCCAGAAGGTGATCTGACAGAAATCACTGAGGAGCAATGTAACCGGCTTTCACTAAAAGGTCCTCTTTTATCCACTGAAGAAATGGAAGCCATTAAAAAACTGAATTATAAGGGATGGCGCAGCAAAGTTATAGACATAACTTACTCAAAGGAATGTGGTAAGAGAGGGTTGGAGGAAGCCTTGGACAGGATTTGTGCAGAAGCACACCATGGAATTAGTGAAGGCTACACCACTCTTGTGCTGTCTGATAGAGCCTTCTCAAAGAAACGTGTTGCTGTGAGCTCCCTCCTTGCTGTTGGTGCTGTCCATCAACATCTTGTTAAAAATCTTGAGCGCACTAGAGTTGCCTTAATAGTTGAATCTGCTGAGCCACGTGAAGTGCACCATTTCTGCACACTTGTTGGTTTTGGTGCTGATGCTATATGCCCGTATTTGGCAGTAGATGCAATTTGGCGACTGCAGGTTGATGGAAAGATCCCACCAAAAGCAAGTGGTGAATTTCACTCAAAAGATGAGTTGGTCAAGAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTGGCCAAGATGGGAATATCAACTTTGGCATCATACAAAGGTGCTCAGATTTTTGAAGCATTGGGTCTTTCGTCGGAAGTGATTGCAAAGTGCTTTGCTGGGACTCCAAGTCGAGTTGAGGGTGCAACGTTCGAGATGCTTGCTCGTGATGCTTTTCAACTACATGAGTTGGCTTTTCCTTCTTGGGTTTTCTCTCCTGGAAGTGCAGAAGCTGTTGCTTTGCCAAATCCTGGGGATTATCACTGGAGAAAAGGTGGTGAAGTTCACCTGAATGATCCACTTGCTATGGCAAAGCTTCAAGAGGCTGCCAGAACTAACAGTGTAGATGCATATAAACAATATTCCAAGCTCATTCATGAATTGAACAAGGCTTGCAATTTGCGTGGGCTTCTGAAATTTAAAGAGACAGCAGTTAAGATTCCTATTGATGAAGTGGAGCCTGCTAGTGAAATAGTTAAACGGTTTTGCACTGGGGCCATGAGTTATGGGTCAATATCATTGGAGGCACACACAGCATTAGCAATGGCTATGAATAAAATGGGAGGGAAATCCAACACAGGTGAGGGAGGGGAGCAACCATCTCGTATGGAGCCTCTTCCTAATGGCTCAATGAATCCCAAAAGGAGTGCCATTAAGCAAGTGGCTAGTGGGAGATTTGGAGTTTCAAGTTACTACCTTACAAATGCTGATGAACTGCAGATAAAAATGGCCCAGGGAGCAAAACCTGGTGAGGGAGGTGAACTTCCTGGCCACAAGGTTATAGGAGACATTGCTGTCACTAGGAATTCAACTGCTGGGGTAGGACTTATCAGTCCACCTCCCCATCATGATATTTATTCAATCGAAGACCTTGCCCAGCTAATTCATGATCTTAAGAATGCCAACCCAGCTGCTCGGATTAGTGTGAAGTTGGTATCGGAAGCTGGAGTGGGGATAATTGCTAGTGGAGTTGTTAAAGGCCATGCCGACCATGTATTGATCTCAGGTCATGATGGAGGTACTGGGGCTTCCAGATGGACTGGCATAAAGAATGCCGGGCTGCCTTGGGAACTTGGCCTGGCTGAGACCCACCAAACTTTGGTTGCTAATGATCTACGTGGTCGCACAGTCCTCCAAACTGATGGGCAACTGAAAACCGGGAGAGATGTGGCCATAGCCACTCTTCTTGGTGCAGAAGAGTTTGGTTTCAGTACTGCTCCGCTCATCACTCTTGGCTGCATCATGATGCGGAAGTGCCACAAGAACACTTGTCCAGTTGGCATTGCTACACAAGATCCAGTACTTAGAGAGAAGTTTGCTGGAGAACCTGAGCATGTTATCAACTTCTTTTTTATGGTAGCAGAGGAAATGAGAGAAATTATGTCCCAGCTTGGGTTTAGAACAGTTAATGAGATGGTTGGCCATTCCGATATGCTTGAATTTGATAAGGACGTTGTTAAGAGCAATGAAAAACTAGAGAACATTGACCTCTCTCTATTGCTTAGACCTGCAGCTGAACTGCGGCCAGAAGCTGCTCAATACTGTGTGCAAAAACAGGATCATGGTTTGGACATGGCCTTGGATAATAAGCTCATAAGTCTGTCTAATGCTGCTTTGGAAAAGGGTCTTCCAGTATACATTGAAACTCCAATCTATAATGTTAACCGTGCTGTGGGAACTATGCTTAGCCATGAGGTGACTAAACGGTACCACCTAGCTGGTCTTCCAACTGATACCATCCATGTTAGATTTACTGGCAGTGCAGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGTATCACTTTGGAACTTGAAGGTGATAGCAATGACTATGTTGGTAAAGGATTATCTGGTGGCAAGATTGTAGTGTATCCTCCAAAAGAAAGTAACTTTGACCCTAAGGAGAACATTGTGATTGGTAATGTTGCACTGTACGGGGCGACATGTGGGGAGGCTTATTTCAATGGGATGGCAGCAGAAAGATTTTGTGTGCGTAATTCTGGAGCTAAGGCTGTAGTAGAAGGTGTTGGTGATCATGGGTGTGAGTACATGACTGGTGGGACTGTTGTTGTGCTTGGTAAAACTGGTAGAAACTTTGCTGCAGGTATGAGTGGTGGGATTGCTTATGTTCTTGATGTGGATGGAAAATTCCAATCTCGATGCAACTTGGAACTTGCAGATCTAGATAAGGTTGAAGAGGAAGAGGACATTCTTGCACTTAGAATGTTGATACAGCAGCATCAACGTCACACAAATAGTCTGCTAGCCAAAGAAGTGCTTGATGATTTTGAGAATCTTCTTCCTAAATTTATCAAGGTGTTCCCTAGGGAGTATAAACGTGTTCTTGCAAGTATGAAGTCTGAGGAAACCTCCAAAGATGCATTGGTGCATGCTGCTAAAGACGACCAAGATGATGAAGCACAAGCAGTGGAGAAGGATGCTTTTGAAGAGCTTAAGAAACTGGTGATGGCATCTTTGAATGAGGAACCGAGTCAGGAAAATTCTGGATGTCCTCTTGGAAATAAAATACCAGAATTTAACGAGTTAGTATACCAAAATAGATGGCGTGAAGCATTAGAGAGGCTTCTTGAAACAAATAACTTTCCAGAGTTTACTGGTCGGGTGTGCCCAGCACCTTGTGAAGGTTCTTGTGTCCTTGGTATTATTGAGAATCCCGTATCCATTAAAAGCATTGAATGTGCCATCATAGACAAGGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCAGTCAAGAGAACTGGGAAAAGAGTAGCCATCGTTGGAAGTGGACCATCTGGCTTGGCAGCTGCTGATCAGCTAAATAAAATGGGTCATACAGTAACCGTGTATGAAAGAGCTGATAGGATAGGAGGGCTTATGATGTATGGGGTTCCCAACATGAAAACTGACAAAGTGGATATAGTTCAACGGCGAGTAAATCTTATGGCTGAAGAGGGAATAGATTTTGTGGTAAATGCTAATGTTGGACATGATCCTTTATACACTCTTGATCGGCTTCGAGGGGAAAACGACGCCATTGTCTTGACTGTAGGAGCTACAAAACCTAGGGATCTTCCTGTACCTGGTCGGGAGCTGTCAGGAGTTCATTTTGCCATGGAGTTTCTCCATGCAAACACTAAAAGCTTGCTTGATAGCAATCTCCAGGATGGTAACTACATTTCTGCCAAGGGCAAGAAAGTTGTGGTCATTGGTGGGGGTGACACTGGCACAGATTGCATAGGAACATCCATTCGTCATGGTTGTAGTAGCGTTGTAAATCTTGAACTCCTTCCTCAGCCACCACCAACTAGGGCTCCCAGCAATCCATGGCCTCAGTGGCCTCGCATATTCCGTGTAGATTATGGTCACCAAGAGGCTGCAGCCAAATTTGGCAAAGATCCAAGATCGTACGAGGTACTAACTAAGAGGTTTATCGGAGATGAAAATGGAGTTGTCAAAGGACTTGAAGTGATTCGTGTTTGCTGGGAGAAAGATGAAACTGGAAAGTTTCAGTTTAAGGAAATTGAGGGATCGGAGGAGATTATTGAGGCTGACCTAGTTTTACTAGCCATGGGATTCCTTGGTCCAGAGTCTACAATTGCAGAGAAGTTGGGTGTGGAGCGAGACAACAGGTCAAACTTCAAGGCCGATTATGGCCGCTTCTCAACTAATGTCAAAGGGGTGTTTGCAGCCGGTGATTGTCGCCGCGGTCAGTCCCTGGTGGTGTGGGCGATTTCAGAGGGACGGCAAGCGGCAGCACAGGTGGAAAACTACCTCATCAAAGAAGACCAAGACCACAGGAATCAAGATGGGCTTGTCAAGAGGCAGCAGGGCCTCAACATGAAGCAGCAGGGCAGCAACAAACACACAGTAATGACTTAG
Predicted protein sequences of Glyma.14g162300
>Glyma.14g162300.1.p sequence-type=predicted peptide transcript=Glyma.14g162300.1 locus=Glyma.14g162300 ID=Glyma.14g162300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSNALSFTLPALNNPQLNALNSPNKARLRHGLRIRVVASCIERKRFLGTRVRPSGSDRIWLLQSGRVPKLRVAVRSAFSAVPEKPLGLYDPAMDKDSCGVGFVAELSGESSRKTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHVFYQEVVDFELPPQGKYAVGMLFLPKSEKRREESKKMFSKVAESLGHTILGWRSVPTDNAGLGKSALQTEPVIEQVFLTPSAKSKVDLERQMYILRKLSMAAITSALNLQNDGITDFYICSLSSRTVVYKGQLTPAQLRDYYFADIGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKELGLSENELKKLLPIVDANSSDSGAFDGVLEFLLHSGKSLPEAVMMMIPEAWQNDKNMDSQRKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVRRKGRLNPGMMLLVDFEKHIVVNDDALKEQYSLARPYEDWLKRQKIELKDIVNSVDESERVPPPIAGVAPLSNDDADMENMGIHGLLAPLKAFGYTVESLEMLLLPMAKDGVEALGSMGNDTPLAVMSKREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMQCMVGPEGDLTEITEEQCNRLSLKGPLLSTEEMEAIKKLNYKGWRSKVIDITYSKECGKRGLEEALDRICAEAHHGISEGYTTLVLSDRAFSKKRVAVSSLLAVGAVHQHLVKNLERTRVALIVESAEPREVHHFCTLVGFGADAICPYLAVDAIWRLQVDGKIPPKASGEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIAKCFAGTPSRVEGATFEMLARDAFQLHELAFPSWVFSPGSAEAVALPNPGDYHWRKGGEVHLNDPLAMAKLQEAARTNSVDAYKQYSKLIHELNKACNLRGLLKFKETAVKIPIDEVEPASEIVKRFCTGAMSYGSISLEAHTALAMAMNKMGGKSNTGEGGEQPSRMEPLPNGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIATLLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMSQLGFRTVNEMVGHSDMLEFDKDVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQDHGLDMALDNKLISLSNAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHVRFTGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPKESNFDPKENIVIGNVALYGATCGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGKFQSRCNLELADLDKVEEEEDILALRMLIQQHQRHTNSLLAKEVLDDFENLLPKFIKVFPREYKRVLASMKSEETSKDALVHAAKDDQDDEAQAVEKDAFEELKKLVMASLNEEPSQENSGCPLGNKIPEFNELVYQNRWREALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPVKRTGKRVAIVGSGPSGLAAADQLNKMGHTVTVYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAEEGIDFVVNANVGHDPLYTLDRLRGENDAIVLTVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSVVNLELLPQPPPTRAPSNPWPQWPRIFRVDYGHQEAAAKFGKDPRSYEVLTKRFIGDENGVVKGLEVIRVCWEKDETGKFQFKEIEGSEEIIEADLVLLAMGFLGPESTIAEKLGVERDNRSNFKADYGRFSTNVKGVFAAGDCRRGQSLVVWAISEGRQAAAQVENYLIKEDQDHRNQDGLVKRQQGLNMKQQGSNKHTVMT*






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